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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015031 ID=TCONS_00015031|Name=TCONS_00015031|organism=Clytia hemisphaerica|type=transcript|length=2035bp TTGGAAAAGAACAAAAAGGGAGTGAcaagacaaaacaaaaaacaaaacaa aaagaaaccaGGTATTCAATAAACTGGGAATCGAAAAATTGTGACTTTTA ATGGAGAAGTCCCAGAATAGTCAATGAAACCCAAAgccaaagaaaaaaag aagtaaagCAAAGGAACAAAGTTTACCAgcttaccgaaagatatatcgaG ACGGAAATTCACCGGCGTTGATTTTAAACAATCGAAAACCCATCAGATTC TTCAAAAAGACTTCTAAGAAACGATGACATTATCACTTGCAGATGAGTTC GGTAGCAATGCTCGCATCTTAGCAGCAGTATCATGGTTCATGAGTTTCTT ATTTGGTCTCATCGGTAATATCTTTATCATCTCCACAATATCATGCATCT TGAAATACCGTAAAAACACACCTAACATGTTAATCCTTATATTAACAATG ACTGACTTATTCTGCGTTCTTGTCGTCTATATCATCCCAGGTATAATGTA CGTTATGAATAAATATCTAGCACGCAGCTGGTTGTGTGATATCCAAACCT TCTTTTTGATATTCACAAACGTTCAATCTATGATTCTGATATTGACAATC ACATTTGAGCGGTATTACGCGGTAGCGAAACCTTACTTATACCAAGAACA TATGACATATTCCAGACGAAAATTAGCACTTTTTAACATCGCTTGTTTAT CAGTATCTATGGTATTTAGCTTACCGACTATTATTCAAAATAACCATAAT AACATTGTGTATTTTCCTGGTACGTTTTGCATGATTGATTTAGAACATGT CTCGGCAATACGAATCGTATTTAATGTGATCTTTTACGTTGTCATTTTAT CgatatttattttgttaaatgTTTTGGGTAATACGCTATCTGTATGTACA GTTCGAAAGATGTCGAATTTTAGACAACAACATTCGATTGGTGGTGTACA ACAGAATCGACATAGCGAAGAGTTCTTGTTCATTCGACTTTGTGTTGTTT CATGTTTGGTTTCAATGGTGGTCTGGGTTCCAGTGTTGGTCTTGTTTATC CTTGGATTAGCAAAAGTGCCGGTTGACGATTGGTATACAATGCTCGCGTT CCGATTGGCTGCATTGCACAGCGTGGTAAACCCATGGCTACATCCGATTC TAAGAAAACGTTTTCGTAATGCATTAGTATGGCATATTACATTGGTGTTG TATTATATGACTTGTACGCTGATCAATAGACCTTCGAACACACTCAGCGA GGTAATGGAAGATACATCAAACTCAAATGATCCAATACAGCAGCCAAAAG ATGAAGGACCCGAAGAAGGGGGTCCAAACGATAACATTATGATGAATATT GCACAGCGAAACATAGTGGACCATGTAGATGCTCCAACCCCCGTCAAAAG TTATGAGAGTGCGTCAGAATCGTATGATATGAGAATGCAAAGCGTTTCAA AGGACCACGATGTAATTGAGAAGACTCACTCGGATGAAGACAATTCATCC GATAATAAAGAACCATTTTACTAAAGTTTGTTAGGTGAATTTACTTATAC CATCAAAGGTGTTAAAGTTATCAGAGAGAAAAATTACTGGAGGATTAAGT TTGTTATAACGATGACCTAACGGGATTTATTTTATACTCCAAATTTCGCA TCTTTTCGAATGCCACTTTAACATTCCGAAAATTTCCAATGGCAAGTGGC CAGTTAGAGTTAAAATTTTCAGTTGAGTGAATCATTGGGTTTTGCTTGAT TGTAatctttatcaaatttcaaatttaaagttaTTCATATATGTACTCTA TATATCTACAATTTTTCATCACGCTATTGTAAAGAGCGCCTTAGTGTCCG GGTGGATTCGCCATGTAGCTACATCAATCAGCTCTCGTTAAGAAGGCTGT GAAATATTGGTTGTTGATaaggaaaaaaaggaaaagtagATTTGACAAAA AAGATCACCGGAAAATTTTATTCAGCTTTTTAAGGCACGGGTATACATGC AGAAATACACGCCATCTTGAGAGCTACAATCTTCC Run BLAST on NCBI protein sequence of TCONS_00015031-protein >TCONS_00015031-protein ID=TCONS_00015031-protein|Name=TCONS_00015031-protein|organism=Clytia hemisphaerica|type=polypeptide|length=416bp
MTLSLADEFGSNARILAAVSWFMSFLFGLIGNIFIISTISCILKYRKNTP NMLILILTMTDLFCVLVVYIIPGIMYVMNKYLARSWLCDIQTFFLIFTNV QSMILILTITFERYYAVAKPYLYQEHMTYSRRKLALFNIACLSVSMVFSL PTIIQNNHNNIVYFPGTFCMIDLEHVSAIRIVFNVIFYVVILSIFILLNV LGNTLSVCTVRKMSNFRQQHSIGGVQQNRHSEEFLFIRLCVVSCLVSMVV WVPVLVLFILGLAKVPVDDWYTMLAFRLAALHSVVNPWLHPILRKRFRNA LVWHITLVLYYMTCTLINRPSNTLSEVMEDTSNSNDPIQQPKDEGPEEGG PNDNIMMNIAQRNIVDHVDAPTPVKSYESASESYDMRMQSVSKDHDVIEK THSDEDNSSDNKEPFY Run BLAST on NCBI transcript from alignment at sc0000203:129954..133877+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015031 ID=TCONS_00015031|Name=TCONS_00015031|organism=Clytia hemisphaerica|type=transcript|length=3924bp|location=Sequence derived from alignment at sc0000203:129954..133877+ (Clytia hemisphaerica) TTGGAAAAGAACAAAAAGGGAGTGAcaagacaaaacaaaaaacaaaacaa
aaagaaaccaGGTATTCAATAAACTGGGAATCGAAAAATTGTGACTTTTA
ATGGAGAAGTCCCAGAATAGTCAATGAAACCCAAAgccaaagaaaaaaag
aagtaaagCAAAGGAACAAAGTTTACCAgcttaccgaaagatatatcgaG
ACGGAAATTCACCGGCGTTGATTTTAAACAATCGAAAACCCATCAGATTC
TTCAAAAAGACTTCTAAGAAACGATGACATTATCACTTGCAGATGAGTTC
GGTAGCAATGCTCGCATCTTAGCAGCAGTATCATGGTTCATGAGTTTCTT
ATTTGGTCTCATCGGTAATATCTTTATCATCTCCACAATATCATGCATCT
TGAAATACCGTAAAAACACACCTAACATGTTAATCCTTATATTAACAATG
ACTGACTTATTCTGCGTTCTTGTCGTCTATATCATCCCAGGTATAATGTA
CGTTATGAATAAATATCTAGCACGCAGCTGGTTGTGTGATATCCAAACCT
TCTTTTTGATATTCACAAACGTTCAATCTATGATTCTGATATTGACAATC
ACATTTGAGCGGTATTACGCGGTAGCGAAACCTTACTTATACCAAGAACA
TATGACATATTCCAGACGAAAATTAGCACTTTTTAACATCGCTTGTTTAT
CAGTATCTATGGTATTTAGCTTACCGACTATTATTCAAAATAACCATAAT
AACATTGTGTATTTTCCTGGTACGTTTTGCATGATTGATTTAGAACATGT
CTCGGCAATACGAATCGTATTTAATGTGATCTTTTACGTTGTCATTTTAT
CgatatttattttgttaaatgTTTTGGGTAATACGCTATCTGTATGTACA
GTTCGAAAGATGTCGAATTTTAGACAACAACATTCGATTGGTGGTGTACA
ACAGAATCGACATAGCGAAGAGTTCTTGTTCATTCGACTTTGTGTTGTTT
CATGTTTGGTTTCAATGGTGGTCTGGGTTCCAGTGTTGGTAAGTCTTTTT
Ctaagtacagttgacgctctctaattcgacgttctactattcgataggct
cccttattcgataaaatttaaagtccccgtcaacaagaaactctcataaa
cgacgctctcttattcgataagctcccttattaaataaatccaattcccc
ttgaagatcgaattagagagcgtcaactgtaattgaTATTTTCTCACGTT
TTTCACATGTAACCCCAAAAACGTCAGAGTAAATGAGAATCGTCTTTCTA
ACGTTTTTTTCTAACCTAGGTTCTTTGGAATCCAACTTTTTCTCAACTTT
TGTTTATCGACACAGTTTTTCGAGTCTGATTAACAGACTAGCAGTGATTC
TTGATattaatgacgtaatcttttatacggaaataCACGGAAAACAACGG
GCGTTTGCCACGAGtttcattgtttaaattcaaaactggtggcaaacTCC
CAGTGTTTCTCGGGTGTTTCCGtaccgtataaaagattacgtcatgaata
tcaagaatcgagcaaagaatattttatttcaccatcaacatgaaaaatgt
ATGCATTTGTTAAGAGCCATTCATCACTGATCCTTATTAAAACAGACTAA
GACGACGATTCTGTAGAATATAAAAACGGTACTTCATCGTTCCAGGTCTT
GTTTATCCTTGGATTAGCAAAAGTGCCGGTTGACGATTGGTATACAATGC
TCGCGTTCCGATTGGCTGCATTGCACAGCGTGGTAAACCCATGGCTACAT
CCGATTCTAAGAAAACGTTTTCGTAATGCATTAGTATGGCATATTACATT
GGTGTTGTATTATATGACTTGTACGCTGATCAATAGACCTTCGAACACAC
TCAGTAAGTCTTTTTGTAAGAATACAGTAGATTCCCGGTTATTCGAACCT
GCACTTATCCCAAGAATTCGGTTATTCGAAATGCAAAAGTGTTCCCCTTA
GATCTGCTTACCAAACCCATGCAAAAACATTCTCGGTTATTTGAACTTTA
GTTATTCGATCTTCAGTTATTCGAAGCCATTTCTATTCCTTTTCGGGCCA
ATTTTAGGTAAAACAATTTTAATATCATTCTAGTACAAATAGATATCAGT
TGTTGAGCCAAGGCTATGTGgtgtaccttaagtggataaattttcgcgtg
gatttaatttcgcgaggcGAAAAAAGTTACCtttcgcgaggatttaattt
cgcgaatcaaccTGTTCGAAAGTTTTCgcgaggattttattttattcgcC
TGTTTTTCACctgatttctttcattttcctagggcttttgggcaaaaaac
acaaattcaaaattttcgcgtggattaattttcgcgaatcaaaggccttc
aaaattttcgcgtggactaaatttcgcgaaaatggccaaaattcgcgaaa
accgcgaaaattaatccacgcgaaaatttatccacttaagtgTATCACAG
CAAACGAAATATCCCTGAGAGCTACTGTGAATCTCATGCACTGTCCTGTA
TTTAAAATCTCGGAcccgtttttttaataaaagtaaataagaGAAAACTC
TATAGGAACACAAGACTTCGTTGGCTAAAATAGTGAGGATAGAAAATAGC
ACAGTAGCTTGctgtgaggatttgtttatttgattattctcAGCGACACA
AAAACTGGAGTGAAACTTTCAatcggggacgattttttggccgatttttc
caGTTTGAGGAGGtccccagtgggtctgtgagaaggaagTGTTGTAATGC
TGCTCTGACCTGTATCGAGTTTTTGCTGATGTTTTATGAATTTTGCTATA
ACAGGCgaaaaccatagatttataaagcccgaagggttagatgtcaggct
ttaagccatcgcaggcaaaaaaaagtgaatatcgcaaaaaatattgttgc
tatttttttcgaaaacccgTGAAACTTCTGAtgggtcaagcgctgaaatt
ctattgtaatgttacgtgacttaggtaggatttcttaactaaccacggca
cacttttcagcaaaagtacgacaTCCTAGCCCTTCGTGCTTAAACGCCAT
GTCTAAAAATGGTGAATGAACTTTTTTCTTTACAGGCGAGGTAATGGAAG
ATACATCAAACTCAAATGATCCAATACAGCAGCCAAAAGATGAAGGACCC
GAAGAAGGGGGTCCAAACGATAACATTATGATGAATATTGCACAGCGAAA
CATAGTGGACCATGTAGATGCTCCAACCCCCGTCAAAAGTTATGAGAGTG
CGTCAGAATCGTATGATATGAGAATGCAAAGCGTTTCAAAGGACCACGAT
GTAATTGAGAAGACTCACTCGGATGAAGACAATTCATCCGATAATAAAGA
ACCATTTTACTAAAGTTTGTTAGGTGAATTTACTTATACCATCAAAGGTG
TTAAAGTTATCAGAGAGAAAAATTACTGGAGGATTAAGTTTGTTATAACG
ATGACCTAACGGGATTTATTTTATACTCCAAATTTCGCATCTTTTCGAAT
GCCACTTTAACATTCCGAAAATTTCCAATGGCAAGTGGCCAGTTAGAGTT
AAAATTTTCAGTTGAGTGAATCATTGGGTTTTGCTTGATTGTAatcttta
tcaaatttcaaatttaaagttaTTCATATATGTACTCTATATATCTACAA
TTTTTCATCACGCTATTGTAAAGAGCGCCTTAGTGTCCGGGTGGATTCGC
CATGTAGCTACATCAATCAGCTCTCGTTAAGAAGGCTGTGAAATATTGGT
TGTTGATaaggaaaaaaaggaaaagtagATTTGACAAAAAAGATCACCGG
AAAATTTTATTCAGCTTTTTAAGGCACGGGTATACATGCAGAAATACACG
CCATCTTGAGAGCTACAATCTTCC Coding sequence (CDS) from alignment at sc0000203:129954..133877+ >TCONS_00015031 ID=TCONS_00015031|Name=TCONS_00015031|organism=Clytia hemisphaerica|type=CDS|length=3753bp|location=Sequence derived from alignment at sc0000203:129954..133877+ (Clytia hemisphaerica) ATGACATTATCACTTGCAGATGAGTTCGGTAGCAATGCTCGCATCTTAGC AGCAGTATCATGGTTCATGAGTTTCTTATTTGGTCTCATCGGTAATATCT TTATCATCTCCACAATATCATGCATCTTGAAATACCGTAAAAACACACCT AACATGTTAATCCTTATATTAACAATGACTGACTTATTCTGCGTTCTTGT CGTCTATATCATCCCAGGTATAATGTACGTTATGAATAAATATCTAGCAC GCAGCTGGTTGTGTGATATCCAAACCTTCTTTTTGATATTCACAAACGTT CAATCTATGATTCTGATATTGACAATCACATTTGAGCGGTATTACGCGGT AGCGAAACCTTACTTATACCAAGAACATATGACATATTCCAGACGAAAAT TAGCACTTTTTAACATCGCTTGTTTATCAGTATCTATGGTATTTAGCTTA CCGACTATTATTCAAAATAACCATAATAACATTGTGTATTTTCCTGGTAC GTTTTGCATGATTGATTTAGAACATGTCTCGGCAATACGAATCGTATTTA ATGTGATCTTTTACGTTGTCATTTTATCgatatttattttgttaaatgTT TTGGGTAATACGCTATCTGTATGTACAGTTCGAAAGATGTCGAATTTTAG ACAACAACATTCGATTGGTGGTGTACAACAGAATCGACATAGCGAAGAGT TCTTGTTCATTCGACTTTGTGTTGTTTCATGTTTGGTTTCAATGGTGGTC TGGGTTCCAGTGTTGGTCTTGTTTATCCTTGGATTAGCAAAAGTGCCGGT TGACGATTGGTATACAATGCTCGCGTTCCGATTGGCTGCATTGCACAGCG TGGTAAACCCATGGCTACATCCGATTCTAAGAAAACGTTTTCGTAATGCA TTAGTATGGCATATTACATTGGTGTTGTATTATATGACTTGTACGCTGAT CAATAGACCTTCGAACACACTCAGCGAGGTAATGGAAGATACATCAAACT CAAATGATCCAATACAGCAGCCAAAAGATGAAGGACCCGAAGAAGGGGGT CCAAACGATAACATTATGATGAATATTGCACAGCGAAACATAGTGGACCA TGTAGATGCTCCAACCCCCGTCAAAAGTTATGAGAGTGCGTCAGAATCGT ATGATATGAGAATGCAAAGCGTTTCAAAGGACCACGATGTAATTGAGAAG ACTCACTCGGATGAAGACAATTCATCCGATAATAAAGAACCATTTTACTA AATGACATTATCACTTGCAGATGAGTTCGGTAGCAATGCTCGCATCTTAG CAGCAGTATCATGGTTCATGAGTTTCTTATTTGGTCTCATCGGTAATATC TTTATCATCTCCACAATATCATGCATCTTGAAATACCGTAAAAACACACC TAACATGTTAATCCTTATATTAACAATGACTGACTTATTCTGCGTTCTTG TCGTCTATATCATCCCAGGTATAATGTACGTTATGAATAAATATCTAGCA CGCAGCTGGTTGTGTGATATCCAAACCTTCTTTTTGATATTCACAAACGT TCAATCTATGATTCTGATATTGACAATCACATTTGAGCGGTATTACGCGG TAGCGAAACCTTACTTATACCAAGAACATATGACATATTCCAGACGAAAA TTAGCACTTTTTAACATCGCTTGTTTATCAGTATCTATGGTATTTAGCTT ACCGACTATTATTCAAAATAACCATAATAACATTGTGTATTTTCCTGGTA CGTTTTGCATGATTGATTTAGAACATGTCTCGGCAATACGAATCGTATTT AATGTGATCTTTTACGTTGTCATTTTATCgatatttattttgttaaatgT TTTGGGTAATACGCTATCTGTATGTACAGTTCGAAAGATGTCGAATTTTA GACAACAACATTCGATTGGTGGTGTACAACAGAATCGACATAGCGAAGAG TTCTTGTTCATTCGACTTTGTGTTGTTTCATGTTTGGTTTCAATGGTGGT CTGGGTTCCAGTGTTGGTCTTGTTTATCCTTGGATTAGCAAAAGTGCCGG TTGACGATTGGTATACAATGCTCGCGTTCCGATTGGCTGCATTGCACAGC GTGGTAAACCCATGGCTACATCCGATTCTAAGAAAACGTTTTCGTAATGC ATTAGTATGGCATATTACATTGGTGTTGTATTATATGACTTGTACGCTGA TCAATAGACCTTCGAACACACTCAGCGAGGTAATGGAAGATACATCAAAC TCAAATGATCCAATACAGCAGCCAAAAGATGAAGGACCCGAAGAAGGGGG TCCAAACGATAACATTATGATGAATATTGCACAGCGAAACATAGTGGACC ATGTAGATGCTCCAACCCCCGTCAAAAGTTATGAGAGTGCGTCAGAATCG TATGATATGAGAATGCAAAGCGTTTCAAAGGACCACGATGTAATTGAGAA GACTCACTCGGATGAAGACAATTCATCCGATAATAAAGAACCATTTTACT AAATGACATTATCACTTGCAGATGAGTTCGGTAGCAATGCTCGCATCTTA GCAGCAGTATCATGGTTCATGAGTTTCTTATTTGGTCTCATCGGTAATAT CTTTATCATCTCCACAATATCATGCATCTTGAAATACCGTAAAAACACAC CTAACATGTTAATCCTTATATTAACAATGACTGACTTATTCTGCGTTCTT GTCGTCTATATCATCCCAGGTATAATGTACGTTATGAATAAATATCTAGC ACGCAGCTGGTTGTGTGATATCCAAACCTTCTTTTTGATATTCACAAACG TTCAATCTATGATTCTGATATTGACAATCACATTTGAGCGGTATTACGCG GTAGCGAAACCTTACTTATACCAAGAACATATGACATATTCCAGACGAAA ATTAGCACTTTTTAACATCGCTTGTTTATCAGTATCTATGGTATTTAGCT TACCGACTATTATTCAAAATAACCATAATAACATTGTGTATTTTCCTGGT ACGTTTTGCATGATTGATTTAGAACATGTCTCGGCAATACGAATCGTATT TAATGTGATCTTTTACGTTGTCATTTTATCgatatttattttgttaaatg TTTTGGGTAATACGCTATCTGTATGTACAGTTCGAAAGATGTCGAATTTT AGACAACAACATTCGATTGGTGGTGTACAACAGAATCGACATAGCGAAGA GTTCTTGTTCATTCGACTTTGTGTTGTTTCATGTTTGGTTTCAATGGTGG TCTGGGTTCCAGTGTTGGTCTTGTTTATCCTTGGATTAGCAAAAGTGCCG GTTGACGATTGGTATACAATGCTCGCGTTCCGATTGGCTGCATTGCACAG CGTGGTAAACCCATGGCTACATCCGATTCTAAGAAAACGTTTTCGTAATG CATTAGTATGGCATATTACATTGGTGTTGTATTATATGACTTGTACGCTG ATCAATAGACCTTCGAACACACTCAGCGAGGTAATGGAAGATACATCAAA CTCAAATGATCCAATACAGCAGCCAAAAGATGAAGGACCCGAAGAAGGGG GTCCAAACGATAACATTATGATGAATATTGCACAGCGAAACATAGTGGAC CATGTAGATGCTCCAACCCCCGTCAAAAGTTATGAGAGTGCGTCAGAATC GTATGATATGAGAATGCAAAGCGTTTCAAAGGACCACGATGTAATTGAGA AGACTCACTCGGATGAAGACAATTCATCCGATAATAAAGAACCATTTTAC TAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00015031-exon-sc0000203-1491911889:129954..130991 | TCONS_00015031-exon-sc0000203-1491911889:129954..130991 | Clytia hemisphaerica | exon |
| TCONS_00015031-exon-sc0000203-1510915933:129954..130991 | TCONS_00015031-exon-sc0000203-1510915933:129954..130991 | Clytia hemisphaerica | exon |
| TCONS_00015031-exon-sc0000203-1575043694:129954..130991 | TCONS_00015031-exon-sc0000203-1575043694:129954..130991 | Clytia hemisphaerica | exon |
| TCONS_00015031-exon-sc0000203-1491911889:131649..131856 | TCONS_00015031-exon-sc0000203-1491911889:131649..131856 | Clytia hemisphaerica | exon |
| TCONS_00015031-exon-sc0000203-1510915933:131649..131856 | TCONS_00015031-exon-sc0000203-1510915933:131649..131856 | Clytia hemisphaerica | exon |
| TCONS_00015031-exon-sc0000203-1575043694:131649..131856 | TCONS_00015031-exon-sc0000203-1575043694:131649..131856 | Clytia hemisphaerica | exon |
| TCONS_00015031-exon-sc0000203-1491911889:133089..133877 | TCONS_00015031-exon-sc0000203-1491911889:133089..133877 | Clytia hemisphaerica | exon |
| TCONS_00015031-exon-sc0000203-1510915933:133089..133877 | TCONS_00015031-exon-sc0000203-1510915933:133089..133877 | Clytia hemisphaerica | exon |
| TCONS_00015031-exon-sc0000203-1575043694:133089..133877 | TCONS_00015031-exon-sc0000203-1575043694:133089..133877 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000203 | supercontig | sc0000203:129954..133877 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
|