XLOC_008413 (gene) - C. hemisphaerica

Overview
NameXLOC_008413
Unique NameXLOC_008413
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000203:129954..133877+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008413 ID=XLOC_008413|Name=XLOC_008413|organism=Clytia hemisphaerica|type=gene|length=3924bp|location=Sequence derived from alignment at sc0000203:129954..133877+ (Clytia hemisphaerica)
TTGGAAAAGAACAAAAAGGGAGTGAcaagacaaaacaaaaaacaaaacaa
aaagaaaccaGGTATTCAATAAACTGGGAATCGAAAAATTGTGACTTTTA
ATGGAGAAGTCCCAGAATAGTCAATGAAACCCAAAgccaaagaaaaaaag
aagtaaagCAAAGGAACAAAGTTTACCAgcttaccgaaagatatatcgaG
ACGGAAATTCACCGGCGTTGATTTTAAACAATCGAAAACCCATCAGATTC
TTCAAAAAGACTTCTAAGAAACGATGACATTATCACTTGCAGATGAGTTC
GGTAGCAATGCTCGCATCTTAGCAGCAGTATCATGGTTCATGAGTTTCTT
ATTTGGTCTCATCGGTAATATCTTTATCATCTCCACAATATCATGCATCT
TGAAATACCGTAAAAACACACCTAACATGTTAATCCTTATATTAACAATG
ACTGACTTATTCTGCGTTCTTGTCGTCTATATCATCCCAGGTATAATGTA
CGTTATGAATAAATATCTAGCACGCAGCTGGTTGTGTGATATCCAAACCT
TCTTTTTGATATTCACAAACGTTCAATCTATGATTCTGATATTGACAATC
ACATTTGAGCGGTATTACGCGGTAGCGAAACCTTACTTATACCAAGAACA
TATGACATATTCCAGACGAAAATTAGCACTTTTTAACATCGCTTGTTTAT
CAGTATCTATGGTATTTAGCTTACCGACTATTATTCAAAATAACCATAAT
AACATTGTGTATTTTCCTGGTACGTTTTGCATGATTGATTTAGAACATGT
CTCGGCAATACGAATCGTATTTAATGTGATCTTTTACGTTGTCATTTTAT
CgatatttattttgttaaatgTTTTGGGTAATACGCTATCTGTATGTACA
GTTCGAAAGATGTCGAATTTTAGACAACAACATTCGATTGGTGGTGTACA
ACAGAATCGACATAGCGAAGAGTTCTTGTTCATTCGACTTTGTGTTGTTT
CATGTTTGGTTTCAATGGTGGTCTGGGTTCCAGTGTTGGTAAGTCTTTTT
Ctaagtacagttgacgctctctaattcgacgttctactattcgataggct
cccttattcgataaaatttaaagtccccgtcaacaagaaactctcataaa
cgacgctctcttattcgataagctcccttattaaataaatccaattcccc
ttgaagatcgaattagagagcgtcaactgtaattgaTATTTTCTCACGTT
TTTCACATGTAACCCCAAAAACGTCAGAGTAAATGAGAATCGTCTTTCTA
ACGTTTTTTTCTAACCTAGGTTCTTTGGAATCCAACTTTTTCTCAACTTT
TGTTTATCGACACAGTTTTTCGAGTCTGATTAACAGACTAGCAGTGATTC
TTGATattaatgacgtaatcttttatacggaaataCACGGAAAACAACGG
GCGTTTGCCACGAGtttcattgtttaaattcaaaactggtggcaaacTCC
CAGTGTTTCTCGGGTGTTTCCGtaccgtataaaagattacgtcatgaata
tcaagaatcgagcaaagaatattttatttcaccatcaacatgaaaaatgt
ATGCATTTGTTAAGAGCCATTCATCACTGATCCTTATTAAAACAGACTAA
GACGACGATTCTGTAGAATATAAAAACGGTACTTCATCGTTCCAGGTCTT
GTTTATCCTTGGATTAGCAAAAGTGCCGGTTGACGATTGGTATACAATGC
TCGCGTTCCGATTGGCTGCATTGCACAGCGTGGTAAACCCATGGCTACAT
CCGATTCTAAGAAAACGTTTTCGTAATGCATTAGTATGGCATATTACATT
GGTGTTGTATTATATGACTTGTACGCTGATCAATAGACCTTCGAACACAC
TCAGTAAGTCTTTTTGTAAGAATACAGTAGATTCCCGGTTATTCGAACCT
GCACTTATCCCAAGAATTCGGTTATTCGAAATGCAAAAGTGTTCCCCTTA
GATCTGCTTACCAAACCCATGCAAAAACATTCTCGGTTATTTGAACTTTA
GTTATTCGATCTTCAGTTATTCGAAGCCATTTCTATTCCTTTTCGGGCCA
ATTTTAGGTAAAACAATTTTAATATCATTCTAGTACAAATAGATATCAGT
TGTTGAGCCAAGGCTATGTGgtgtaccttaagtggataaattttcgcgtg
gatttaatttcgcgaggcGAAAAAAGTTACCtttcgcgaggatttaattt
cgcgaatcaaccTGTTCGAAAGTTTTCgcgaggattttattttattcgcC
TGTTTTTCACctgatttctttcattttcctagggcttttgggcaaaaaac
acaaattcaaaattttcgcgtggattaattttcgcgaatcaaaggccttc
aaaattttcgcgtggactaaatttcgcgaaaatggccaaaattcgcgaaa
accgcgaaaattaatccacgcgaaaatttatccacttaagtgTATCACAG
CAAACGAAATATCCCTGAGAGCTACTGTGAATCTCATGCACTGTCCTGTA
TTTAAAATCTCGGAcccgtttttttaataaaagtaaataagaGAAAACTC
TATAGGAACACAAGACTTCGTTGGCTAAAATAGTGAGGATAGAAAATAGC
ACAGTAGCTTGctgtgaggatttgtttatttgattattctcAGCGACACA
AAAACTGGAGTGAAACTTTCAatcggggacgattttttggccgatttttc
caGTTTGAGGAGGtccccagtgggtctgtgagaaggaagTGTTGTAATGC
TGCTCTGACCTGTATCGAGTTTTTGCTGATGTTTTATGAATTTTGCTATA
ACAGGCgaaaaccatagatttataaagcccgaagggttagatgtcaggct
ttaagccatcgcaggcaaaaaaaagtgaatatcgcaaaaaatattgttgc
tatttttttcgaaaacccgTGAAACTTCTGAtgggtcaagcgctgaaatt
ctattgtaatgttacgtgacttaggtaggatttcttaactaaccacggca
cacttttcagcaaaagtacgacaTCCTAGCCCTTCGTGCTTAAACGCCAT
GTCTAAAAATGGTGAATGAACTTTTTTCTTTACAGGCGAGGTAATGGAAG
ATACATCAAACTCAAATGATCCAATACAGCAGCCAAAAGATGAAGGACCC
GAAGAAGGGGGTCCAAACGATAACATTATGATGAATATTGCACAGCGAAA
CATAGTGGACCATGTAGATGCTCCAACCCCCGTCAAAAGTTATGAGAGTG
CGTCAGAATCGTATGATATGAGAATGCAAAGCGTTTCAAAGGACCACGAT
GTAATTGAGAAGACTCACTCGGATGAAGACAATTCATCCGATAATAAAGA
ACCATTTTACTAAAGTTTGTTAGGTGAATTTACTTATACCATCAAAGGTG
TTAAAGTTATCAGAGAGAAAAATTACTGGAGGATTAAGTTTGTTATAACG
ATGACCTAACGGGATTTATTTTATACTCCAAATTTCGCATCTTTTCGAAT
GCCACTTTAACATTCCGAAAATTTCCAATGGCAAGTGGCCAGTTAGAGTT
AAAATTTTCAGTTGAGTGAATCATTGGGTTTTGCTTGATTGTAatcttta
tcaaatttcaaatttaaagttaTTCATATATGTACTCTATATATCTACAA
TTTTTCATCACGCTATTGTAAAGAGCGCCTTAGTGTCCGGGTGGATTCGC
CATGTAGCTACATCAATCAGCTCTCGTTAAGAAGGCTGTGAAATATTGGT
TGTTGATaaggaaaaaaaggaaaagtagATTTGACAAAAAAGATCACCGG
AAAATTTTATTCAGCTTTTTAAGGCACGGGTATACATGCAGAAATACACG
CCATCTTGAGAGCTACAATCTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015031TCONS_00015031Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015031-proteinTCONS_00015031-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000203supercontigsc0000203:129954..133877 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.02	0.03	0	0.6	0.54	0.31	0.37	0.49	0.4	1.96	1.4	1.04	2.21	1.33	0.88	0.04	0.02	0.64	0.71	0.6	0.91	0.63	1.06	0.16	0.03	0.02	0