TCONS_00014592 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014592
Unique NameTCONS_00014592
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1691

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014592 ID=TCONS_00014592|Name=TCONS_00014592|organism=Clytia hemisphaerica|type=transcript|length=1691bp
GTTTGAACCTGCACATGGtttgcttttgttttatttttgtggGTACAACA
TCCGTTGTGGCACAATTGAAGACGTTAAAAAAAACTATACCTTAATTCCA
TTAATTTTCGCGCGCCTTTTATTTTTGCGCCTCTAATTTTCACGCCTCTA
ATTTTCACGCCTCTAATTTCATGCCTTTAATTTTCACGCAACTTGTATAA
AAGGATATTTTGCGCACCCTTTAATAGGCCTATTTTGGAACCTTGGATGT
TAATTGATACCTTTTTGGTGGGATCATTTTAAACTTATGATTTCAAAGTT
AACTTTAGAATGCCGTGCTCGAACTCAATGATTTTCTTGATAGTTTTGAC
TGGATAAAGTTTATATTCTATGCCAggaattcttttaaaaagaagaaaca
caATATAAGATACAGAGGAACAAGGGGGAACCTGATGCTATAACTATAAG
GTTTCCTTCCTAATAACGGAAAGGgtcaaagaattttaaaaacaaaactg
ttttttaattgttgttatttttactgaatagttaaaattttatttttagg
ggGTTAAAACTGAATACATAATTATAGGGGTctagaaaataatttgaaat
agagTAGAGCTgggaaaaaactaaaataaatatGACGCTTGATCATGCTG
GCCGAATGAAGGAATTCTTATTGGATAACAAAAAAGTTTCCAATGTTTCC
TTTGGTACAACATTATCAAGAGAACTTTTACCACTAAAAACACCACACAC
TAAGGCTGGTAATGAAATGTGTTTGCGTGGTGTACCCAATCTTGGACCAG
GGTCTTATAAAAATGATGAGACCAGCTCATTCATTCACGAATTAGAATTA
AAACCAACTTGCAAAAAAGGTTATTCACTTGGTGCCAGAACAGCCCAACG
CTTTCTTGAATTCAGGGAAGACTTTCCGGGACCTCCATCGTTTCAAGAGA
TCATTTCAAAACCACGTGAATTTACTGCGGATAAAAAACCTTTCAGATCT
GGATCGTCAAGATTCCCAttaataaaacttgaaagtttacCAGGCCCGGG
TACTTATGAACATAATGTTGGTCGAAATCGTAAAGTTCAATTTCATGGAT
CCTTCGGTGGACCACAAACACTACGCACATCCATTCAAACTATCTGCTCT
TCTGATGTCACTAAAACACCTtgTTGTCGATGCTCTACTGACCCTGTTGG
TGACTATTACATGAACAAAAACAACGTTTCAATGTGTCGTGGTTGCAAAG
AAGACGCCCCTTCCAACCTGACCGATAAAAATAAAAGattttggaGTGGG
TTTTTTAAAGTACGCGATTGTACTGGTATACATTCACACGAAGGGACAAG
CGCCAAATTAAGActgaaaactGACAAAGACATCAAGAAACAACGCATGC
GTGAATCCTACTTCAGTTTATACTATTAACCACAAACATTTTATGAAAAA
CCAttcacatttttatttttttccaaaaagatcTATTTTCtatcatattt
ttaaaatatttttgtattattgTATCTTTTGGTTTTGAATGGTCCCGGGG
GTACCCGACCTGCTGCTGTAAATGTCTGCAAAGTTGAACCAAACGGTGCA
CTTTTTTGGTAGAATATTGAATCTAGACTAAGATATAACGTCTTAAACCA
TACAATGGACCGagataacaaaagaaaacatcTGAGAGCCG
Run BLAST on NCBI

protein sequence of TCONS_00014592-protein

>TCONS_00014592-protein ID=TCONS_00014592-protein|Name=TCONS_00014592-protein|organism=Clytia hemisphaerica|type=polypeptide|length=265bp
MTLDHAGRMKEFLLDNKKVSNVSFGTTLSRELLPLKTPHTKAGNEMCLRG
VPNLGPGSYKNDETSSFIHELELKPTCKKGYSLGARTAQRFLEFREDFPG
PPSFQEIISKPREFTADKKPFRSGSSRFPLIKLESLPGPGTYEHNVGRNR
KVQFHGSFGGPQTLRTSIQTICSSDVTKTPCCRCSTDPVGDYYMNKNNVS
MCRGCKEDAPSNLTDKNKRFWSGFFKVRDCTGIHSHEGTSAKLRLKTDKD
IKKQRMRESYFSLYY
Run BLAST on NCBI

transcript from alignment at sc0000190:149848..156151-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014592 ID=TCONS_00014592|Name=TCONS_00014592|organism=Clytia hemisphaerica|type=transcript|length=6304bp|location=Sequence derived from alignment at sc0000190:149848..156151- (Clytia hemisphaerica)
GTTTGAACCTGCACATGGTTTGCTTTTGTTTTATTTTTGTGGGTACAACA
TCCGTTGTGGCACAATTGAAGACGTTAAAAAAAACTATACCTTAATTCCA
TTAATTTTCGCGCGCCTTTTATTTTTGCGCCTCTAATTTTCACGCCTCTA
ATTTTCACGCCTCTAATTTCATGCCTTTAATTTTCACGCAACTTGTATAA
AAGGATATTTTGCGCACCCTTTAATAGGCCTATTTTGGAACCTTGGATGT
TAATTGATACCTTTTTGGTGGGATCATTTTAAACTTATGATTTCAAAGTT
AACTTTAGAATGCCGTGCTCGAACTCAATGATTTTCTTGATAGTTTTGAC
TGGATAAAGTTTATATTCTATGCCAGGAATTCTTTTAAAAAGAAGAAACA
CAATATAAGATACAGAGGAACAAGGGGGAACCTGATGCTATAACTATAAG
GTTTCCTTCCTAATAACGGAAAGGGTCAAAGAATTTTAAAAACAAAACTG
TTTTTTAATTGTTGTTATTTTTACTGAATAGTTAAAATTTTATTTTTAGG
GGGTTAAAACTGAATACATAATTATAGGGGTCTAGAAAATAATTTGAAAT
AGAGTAGAGCTGGGAAAAAACTAAAATAAATATGACGCTTGATCATGCTG
GCCGAATGAAGGAATTCTTATTGGATAACAAAAAAGGTATACTTTCAAGT
AAAAGCTTTTTGACCCACTGTTTTTTTACTTTCAGAAAAGTTTAAATTTT
TAAACATTTTAACGTTAAGTTTACAAACTTGTTACTTGTGCCCACGAACA
ATTTGCAATGGAATATTCAATTATAATAATATGACATTTTGTGCTCATTA
CTTATAGTAAATCTTCAAAATACTTACAATAAACAACAATAGACATTTTG
GATTACTGTACATCTGAACATTAAAGAATTAATTTTTTTCTTTCCTCTAG
TTTCCAATGTTTCCTTTGGTACAACATTATCAAGAGAACTTTTACCACTA
AAAACACCACACACTAAGGCTGGTAATGAAATGTGTTTGCGTGGTGTACC
CAATCTTGGACCAGGGTCTTATAAAAATGATGAGGTAAAGAAAATCAGTT
TATTGTTTGATTTTTGAATGAGATAATTCTACTATTAGTTAAGCCATTTT
TACAACTCCGCTTATTGTTACTTAAGTGATGTATTGGACAAAACTTGAAG
AGTCCGGAAAATGTTTATTATCGCATAAATCTAAGTTGTTGCAGTAGTGC
ATACCATAAATAATTATTTTTTGAAATCTATGAAACCATTTTAATTGCAG
AAGAAGCATGATTATACCCAAACACAAAAACTTTGTTTTTAGGGCTGTTC
TGGGCTGTTATGGTCCTAGTTTATCGTATTTTCTTTTTCTTATTCACAGA
CCAGCTCATTCATTCACGAATTAGAATTAAAACCAACTTGCAAAAAAGGT
TATTCACTTGGTGCCAGAACAGCCCAACGCTTTCTTGAATTCAGGGTAAG
CATTTATCTTATTATGATTAGATTAATTCAACTGATACACCAATAGCTTT
TCCTAGGTCATAGTTGGAATTTACTACAAGTCCATAATTTTACGCTCAAA
CATTTTAAACATGGTAACTTGAGATCTAAGATCCAATTATCTAGTAGTTC
AGTTTTAAAGAAATTATCCAAAAATGCTATTCTTTACTAAATTTGTTGAC
CACTTTCTAATCTCACCTAACTAAATCGGTCAAAAAAAGATGCTCGAAAG
TGGTTTTTAGTAAAAAAAAAAACAACCGGGAAAGTGAGAAGTGAGGATTC
AAAATTACTCGCAAACCAAAAAAGTGAGAGTGGGATGTAAATTCGGCCTG
CATTTCTAGGTTCCATTACTGTGTTATTTCCATCTTCATTTATAGGAAGA
CTTTCCGGGACCTCCATCGTTTCAAGAGATCATTTCAAAACCACGTGAAT
TTACTGCGGATAAAAAACCTTTCAGATCTGGATCGTCAAGATTCCCATTA
ATAAAACTTGAAAGTTTACCAGGGTTAGTTTCTACTTTTAACCATTTATA
TCTCGGATAGTCAACATCAGGATCTACTAAACCTTGTCAGACAGGTTTTT
TGCTTAATCGGATCTTTTGTTATCCCATGACAATGACAATTCTTGGATCA
GTTTTTAAAGAATAGGGGATTTGAATGAGCTAAGTAAGGACTCTTTTCAG
CAAGACAAAAAATCTCAGTTTTTACTGATATTAAAAAGGCCTCGTTAGTA
CTCCTTATAACGATAGGGAAAGCCACGATGACGTTTCGCTTCGGTGCGGG
CCGATGAACCTTTCTATCTGATTACTGCGTATAAATATATTTGTCGTTTC
AAAACAAAAGGGTAGTACCAAAACTTGGTGTTTCTTAGAGTTATGGCTTT
CACCAAACTAATTCGTTGAACTAATTTGTCAAAACTTTCATGTAATTTTT
GTTTTTTTCCTTTCCAGCCCGGGTACTTATGAACATAATGTTGGTCGAAA
TCGTAAAGTTCAATTTCATGGATCCTTCGGTGGACCACAAACACTACGCA
CATCCATTCAAACTATCTGCTCTTCTGATGTCACTAAAACACCTGTAAGT
GCGACATTGGGAAAGCCTTTTAATGTAAAGTTTTAGTGTTTAATTCGGCT
TGACATAAACATAATGATATAATGTTGACTTATTGTCTTGAAGTTGGAAT
ATTTCAAACAAACGAAAGGTTTGACACAGAAAATTACATATTAACCTCGT
ACTAAAAGCTTTGATATCTACCTATTACGAGAATTCCCCGGGGAGGCGAC
TAGGTTTGCGAGATGGTTTGTGCCGCCCGACTTAGGGCCCAAAGACAAAC
CATCTCGAGGGACTGAAATAAAGGAAAAGCCGGAATTTTCATAAATTATA
TGACCGTTATTGTGACTACTTTGCTTGGAATTTAGGCACTTAGGCTTTTG
AGGGTCAAGAAATTGGTTTTAGCTAATTTTACAATCCTTAAGGGGACTAG
AATTAGATTTTGTGATTTTTACGACCCTTAGTGGGATTTTGAATATCGAA
AAAAGTTACTTTTAAAGGCGGCAAATACCCGTACCCTTCTTTTGTCTAAG
TGACCCACCAGGGAGGGTTTCAAATGCATAAACTTTCGCAAAAAAAGGAC
AAAATTCCCGAAAATCTCAAAAGTTTGAACGCCTAAAGTATTGGATACAG
CAATGTTAAGTTTAATTCTTATTTTTTAGTGTTGTCGATGCTCTACTGAC
CCTGTTGGTGACTATTACATGAACAAAAACAACGTTTCAATGTGTCGTGG
TTGCAAAGAAGACGCCCCTTCCAACCTGACCGATAAAAATAAAAGGTAAC
ATCGAAATTCGTATACCTTTTCAACCGTAGCCACCAATTGCCGCGCGGGT
ATTTTGTTGTCCGTTTTACCACCTTAAACCGTCCCAGTCTTTTTTTCGCA
TTTATAGACAATAGAAAAAAGTGTAATAAAAGGATTGGATCGAGTTAAGG
GTGGTAAAACGGACAAAAATAAGCCCGCGCGGCAATTGACGGCTACGGTC
GAAAAGGTGTATTGATCTATTATGAATACCTTTGTACGCAAATAAAAAAT
AGGCAATTATTTTTTTTCAATGGCCTTGAAATTGACATATCAAGAAGTTC
AAAATAAATCACTGTGCTCATTGCTTTAACAAACCGGCTGTTTGAAACTA
AGGGAACTTTACTATTTCAACGAAATTTTTCTATCGTGTTACAGTAGTTA
TATTTCTCGTTATGGCGTCTCTTTATTGAATATATTTGTTTCAGATTAGA
GAGATGAATTCTTTTTTTATAAAAACCGGTAAATTTTTGTTGAGGCTTGC
TTGACTGTTCTTATCTTTTTGGAACCTCGATCCTCGCATTGTTCTTTTCT
TGTTCTTATTTTAGTGCAAAGTCGAGGCGTTTTAGGCACGATTTTATACA
CGATTTTAAAAATATTTTGTCCCATTACGTGAAATTCATTTCAGGCTCTT
TTTTTTAAGTTGTTCCTATTTTTCGACGATTTTGAGCCTCATTGTTCTTA
TAAATTGATTGTACGTGTAAAAAAAGAGTGTATTCGGGGAACGAAAGATG
ACACTTAATCAGCTAATGAAAAATATCGCTCATGGTACTTTAATCGGATT
AAATTTCGCGAGATTAAATTTCGCGAGCGAAAAAAATCGCGAAATTTTCT
GGATTTAATTTCGCGAGTCAAAGTTTTGAAAAATTTCGCGTGGATTTAAT
TTCGCGAATAAGCCTGAAAACAGCTGAAAATAGCCTTTTTTTGCCACAAA
TGGAGACTTTGGACTGGTTTCTCAACTGAAAATGCAATTTTAAAGATTTT
GTGGTGGATTTAATTTCGCGAGTCAGGAATCTCACGCGTTTTCGCGAGTT
TTAATTTCGCGAAAATGGCAAAAATTAGCGAAATCGCGAAATTTAATCTC
GTGAAAGTTAATCCGATTAAAGTAAACTAAATCAATGTTTTTCTTTAGGC
AAAAAAAAATACACGCCTTTTTTTTTATAAGAATAGTGTACTTTGGATGA
GTGTCAAGTATTCTTAATAAAGTGCCAAAATTGAGAGTGAAATATTCTTA
ACGTACATGTTTTTTTTTATAAGCATAACGCTTATAAGCATCTGAAGGCT
CAGATTTGCAGAATTCCTAAGCATAACATGAGCATATGTCAGCCTAAAAT
ATTTTTCAAGTGGTCATTTTTATCTGTTTTTGTTTCATTTTTATCTGGTT
TGGTAGAGGTTAAGTAAAAAATAAGACATTCCACGGCTAGCTACATTGCA
CTGCTCCCAAAATCTGAACAAATTTTTTACAAAATATCTGAAATTTCACT
AAAAAACTTGGCTCGGGGTGAATCATAAGCATAATTCTTAAGCATGTAAT
AAGCATAAACTATGCCTGGATGCTTTGAGAACTTAAGCATACACAAGCCT
GACCAAGGGGCATACACTTGCTTATAAAAAAAAAAACATGTATTTTTACT
TTTTTAGACTTGACTTTTTTACAAACATGAGAAATGATTAATTTGAGAGT
TTTGGACTTTTGAGTGAACATTTGGGTTAAAATTACATTTCTTCCTCAAA
GCTTCCTTCTATTTATCTCTAACAAAGGAAGCAGTTTTTTCTGTTAACCA
AATACAAAATTACTGTATTCTTATCAATTTCTGTGAAATTCACCCTAGAG
GGTATTCTTAGGGTATTCTTACGATTTGGCCGATTTTTACCCTGATACTC
TTATAGCTTGTTAAAGTGTGTAATCCTATTTAGTAACAATAGTAATCCTG
TTTTGTTTTTTTTAGATTTTGGAGTGGGTTTTTTAAAGTACGCGATTGTA
CTGGTATACATTCACACGAAGGGACAAGCGCCAAATTAAGAGTAAGTGCA
CCTTTCCATAAAATATTTGCTCAATTTTCATAGAAAAAACCTAATAGTTT
AATCAGATTAGTTGTTGTGAGATTCAGTTTTGCGAATTTTTGCCTTTTTT
GCGAAAATGAAACTAGCGAAATCACGTGATTTGCGCAGATAAATTCAAAT
AATTTTGCGAAATTAAACCTTGCAAAAATTAATCTGATTAAAGTGTATCA
TTCCCCCTTCTGGACATCTTCTATATTTCCACAGACTCTTGAGCTATTCT
TTCCTGAAAACGATGTCAAAAATCAATAGTTTAAGCCTCCTTTAAAAGCA
TATTCACTGAGCTTTTACGACACGTGATTTATCCATCCATCCCTGGTGCA
TACGCCCAAAATGATATTATGATCAACTTTTCGACCAATCATGAGAAAAT
TATCAAATTGAATACGACGAGTAGTATACTTTGCCTAAAAGAAAATTATT
CGTTATTAAACCTACGGCATCATTACTCGAACAATCATTGCGTTGTCTTG
TTACAGAGTCCTATACAGAGTAGTTAAAATTCAACCTTCGACATGGTTAC
TTATTCAAAGTTTGTTCTTTTTTTAGCTGAAAACTGACAAAGACATCAAG
AAACAACGCATGCGTGAATCCTACTTCAGTTTATACTATTAACCACAAAC
ATTTTATGAAAAACCATTCACATTTTTATTTTTTTCCAAAAAGATCTATT
TTCTATCATATTTTTAAAATATTTTTGTATTATTGTATCTTTTGGTTTTG
AATGGTCCCGGGGGTACCCGACCTGCTGCTGTAAATGTCTGCAAAGTTGA
ACCAAACGGTGCACTTTTTTGGTAGAATATTGAATCTAGACTAAGATATA
ACGTCTTAAACCATACAATGGACCGAGATAACAAAAGAAAACATCTGAGA
GCCG

Coding sequence (CDS) from alignment at sc0000190:149848..156151-

>TCONS_00014592 ID=TCONS_00014592|Name=TCONS_00014592|organism=Clytia hemisphaerica|type=CDS|length=6384bp|location=Sequence derived from alignment at sc0000190:149848..156151- (Clytia hemisphaerica)
CTGAAAACTGACAAAGACATCAAGAAACAACGCATGCGTGAATCCTACTT
CAGTTTATACTATTAAATTTTGGAGTGGGTTTTTTAAAGTACGCGATTGT
ACTGGTATACATTCACACGAAGGGACAAGCGCCAAATTAAGATGTTGTCG
ATGCTCTACTGACCCTGTTGGTGACTATTACATGAACAAAAACAACGTTT
CAATGTGTCGTGGTTGCAAAGAAGACGCCCCTTCCAACCTGACCGATAAA
AATAAAAGCCCGGGTACTTATGAACATAATGTTGGTCGAAATCGTAAAGT
TCAATTTCATGGATCCTTCGGTGGACCACAAACACTACGCACATCCATTC
AAACTATCTGCTCTTCTGATGTCACTAAAACACCTGAAGACTTTCCGGGA
CCTCCATCGTTTCAAGAGATCATTTCAAAACCACGTGAATTTACTGCGGA
TAAAAAACCTTTCAGATCTGGATCGTCAAGATTCCCATTAATAAAACTTG
AAAGTTTACCAGGACCAGCTCATTCATTCACGAATTAGAATTAAAACCAA
CTTGCAAAAAAGGTTATTCACTTGGTGCCAGAACAGCCCAACGCTTTCTT
GAATTCAGGTTTCCAATGTTTCCTTTGGTACAACATTATCAAGAGAACTT
TTACCACTAAAAACACCACACACTAAGGCTGGTAATGAAATGTGTTTGCG
TGGTGTACCCAATCTTGGACCAGGGTCTTATAAAAATGATGAGATGACGC
TTGATCATGCTGGCCGAATGAAGGAATTCTTATTGGATAACAAAAAAGCT
GAAAACTGACAAAGACATCAAGAAACAACGCATGCGTGAATCCTACTTCA
GTTTATACTATTAAATTTTGGAGTGGGTTTTTTAAAGTACGCGATTGTAC
TGGTATACATTCACACGAAGGGACAAGCGCCAAATTAAGATGTTGTCGAT
GCTCTACTGACCCTGTTGGTGACTATTACATGAACAAAAACAACGTTTCA
ATGTGTCGTGGTTGCAAAGAAGACGCCCCTTCCAACCTGACCGATAAAAA
TAAAAGCCCGGGTACTTATGAACATAATGTTGGTCGAAATCGTAAAGTTC
AATTTCATGGATCCTTCGGTGGACCACAAACACTACGCACATCCATTCAA
ACTATCTGCTCTTCTGATGTCACTAAAACACCTGAAGACTTTCCGGGACC
TCCATCGTTTCAAGAGATCATTTCAAAACCACGTGAATTTACTGCGGATA
AAAAACCTTTCAGATCTGGATCGTCAAGATTCCCATTAATAAAACTTGAA
AGTTTACCAGGACCAGCTCATTCATTCACGAATTAGAATTAAAACCAACT
TGCAAAAAAGGTTATTCACTTGGTGCCAGAACAGCCCAACGCTTTCTTGA
ATTCAGGTTTCCAATGTTTCCTTTGGTACAACATTATCAAGAGAACTTTT
ACCACTAAAAACACCACACACTAAGGCTGGTAATGAAATGTGTTTGCGTG
GTGTACCCAATCTTGGACCAGGGTCTTATAAAAATGATGAGATGACGCTT
GATCATGCTGGCCGAATGAAGGAATTCTTATTGGATAACAAAAAAGCTGA
AAACTGACAAAGACATCAAGAAACAACGCATGCGTGAATCCTACTTCAGT
TTATACTATTAAATTTTGGAGTGGGTTTTTTAAAGTACGCGATTGTACTG
GTATACATTCACACGAAGGGACAAGCGCCAAATTAAGATGTTGTCGATGC
TCTACTGACCCTGTTGGTGACTATTACATGAACAAAAACAACGTTTCAAT
GTGTCGTGGTTGCAAAGAAGACGCCCCTTCCAACCTGACCGATAAAAATA
AAAGCCCGGGTACTTATGAACATAATGTTGGTCGAAATCGTAAAGTTCAA
TTTCATGGATCCTTCGGTGGACCACAAACACTACGCACATCCATTCAAAC
TATCTGCTCTTCTGATGTCACTAAAACACCTGAAGACTTTCCGGGACCTC
CATCGTTTCAAGAGATCATTTCAAAACCACGTGAATTTACTGCGGATAAA
AAACCTTTCAGATCTGGATCGTCAAGATTCCCATTAATAAAACTTGAAAG
TTTACCAGGACCAGCTCATTCATTCACGAATTAGAATTAAAACCAACTTG
CAAAAAAGGTTATTCACTTGGTGCCAGAACAGCCCAACGCTTTCTTGAAT
TCAGGTTTCCAATGTTTCCTTTGGTACAACATTATCAAGAGAACTTTTAC
CACTAAAAACACCACACACTAAGGCTGGTAATGAAATGTGTTTGCGTGGT
GTACCCAATCTTGGACCAGGGTCTTATAAAAATGATGAGATGACGCTTGA
TCATGCTGGCCGAATGAAGGAATTCTTATTGGATAACAAAAAAGCTGAAA
ACTGACAAAGACATCAAGAAACAACGCATGCGTGAATCCTACTTCAGTTT
ATACTATTAAATTTTGGAGTGGGTTTTTTAAAGTACGCGATTGTACTGGT
ATACATTCACACGAAGGGACAAGCGCCAAATTAAGATGTTGTCGATGCTC
TACTGACCCTGTTGGTGACTATTACATGAACAAAAACAACGTTTCAATGT
GTCGTGGTTGCAAAGAAGACGCCCCTTCCAACCTGACCGATAAAAATAAA
AGCCCGGGTACTTATGAACATAATGTTGGTCGAAATCGTAAAGTTCAATT
TCATGGATCCTTCGGTGGACCACAAACACTACGCACATCCATTCAAACTA
TCTGCTCTTCTGATGTCACTAAAACACCTGAAGACTTTCCGGGACCTCCA
TCGTTTCAAGAGATCATTTCAAAACCACGTGAATTTACTGCGGATAAAAA
ACCTTTCAGATCTGGATCGTCAAGATTCCCATTAATAAAACTTGAAAGTT
TACCAGGACCAGCTCATTCATTCACGAATTAGAATTAAAACCAACTTGCA
AAAAAGGTTATTCACTTGGTGCCAGAACAGCCCAACGCTTTCTTGAATTC
AGGTTTCCAATGTTTCCTTTGGTACAACATTATCAAGAGAACTTTTACCA
CTAAAAACACCACACACTAAGGCTGGTAATGAAATGTGTTTGCGTGGTGT
ACCCAATCTTGGACCAGGGTCTTATAAAAATGATGAGATGACGCTTGATC
ATGCTGGCCGAATGAAGGAATTCTTATTGGATAACAAAAAAGCTGAAAAC
TGACAAAGACATCAAGAAACAACGCATGCGTGAATCCTACTTCAGTTTAT
ACTATTAAATTTTGGAGTGGGTTTTTTAAAGTACGCGATTGTACTGGTAT
ACATTCACACGAAGGGACAAGCGCCAAATTAAGATGTTGTCGATGCTCTA
CTGACCCTGTTGGTGACTATTACATGAACAAAAACAACGTTTCAATGTGT
CGTGGTTGCAAAGAAGACGCCCCTTCCAACCTGACCGATAAAAATAAAAG
CCCGGGTACTTATGAACATAATGTTGGTCGAAATCGTAAAGTTCAATTTC
ATGGATCCTTCGGTGGACCACAAACACTACGCACATCCATTCAAACTATC
TGCTCTTCTGATGTCACTAAAACACCTGAAGACTTTCCGGGACCTCCATC
GTTTCAAGAGATCATTTCAAAACCACGTGAATTTACTGCGGATAAAAAAC
CTTTCAGATCTGGATCGTCAAGATTCCCATTAATAAAACTTGAAAGTTTA
CCAGGACCAGCTCATTCATTCACGAATTAGAATTAAAACCAACTTGCAAA
AAAGGTTATTCACTTGGTGCCAGAACAGCCCAACGCTTTCTTGAATTCAG
GTTTCCAATGTTTCCTTTGGTACAACATTATCAAGAGAACTTTTACCACT
AAAAACACCACACACTAAGGCTGGTAATGAAATGTGTTTGCGTGGTGTAC
CCAATCTTGGACCAGGGTCTTATAAAAATGATGAGATGACGCTTGATCAT
GCTGGCCGAATGAAGGAATTCTTATTGGATAACAAAAAAGCTGAAAACTG
ACAAAGACATCAAGAAACAACGCATGCGTGAATCCTACTTCAGTTTATAC
TATTAAATTTTGGAGTGGGTTTTTTAAAGTACGCGATTGTACTGGTATAC
ATTCACACGAAGGGACAAGCGCCAAATTAAGATGTTGTCGATGCTCTACT
GACCCTGTTGGTGACTATTACATGAACAAAAACAACGTTTCAATGTGTCG
TGGTTGCAAAGAAGACGCCCCTTCCAACCTGACCGATAAAAATAAAAGCC
CGGGTACTTATGAACATAATGTTGGTCGAAATCGTAAAGTTCAATTTCAT
GGATCCTTCGGTGGACCACAAACACTACGCACATCCATTCAAACTATCTG
CTCTTCTGATGTCACTAAAACACCTGAAGACTTTCCGGGACCTCCATCGT
TTCAAGAGATCATTTCAAAACCACGTGAATTTACTGCGGATAAAAAACCT
TTCAGATCTGGATCGTCAAGATTCCCATTAATAAAACTTGAAAGTTTACC
AGGACCAGCTCATTCATTCACGAATTAGAATTAAAACCAACTTGCAAAAA
AGGTTATTCACTTGGTGCCAGAACAGCCCAACGCTTTCTTGAATTCAGGT
TTCCAATGTTTCCTTTGGTACAACATTATCAAGAGAACTTTTACCACTAA
AAACACCACACACTAAGGCTGGTAATGAAATGTGTTTGCGTGGTGTACCC
AATCTTGGACCAGGGTCTTATAAAAATGATGAGATGACGCTTGATCATGC
TGGCCGAATGAAGGAATTCTTATTGGATAACAAAAAAGCTGAAAACTGAC
AAAGACATCAAGAAACAACGCATGCGTGAATCCTACTTCAGTTTATACTA
TTAAATTTTGGAGTGGGTTTTTTAAAGTACGCGATTGTACTGGTATACAT
TCACACGAAGGGACAAGCGCCAAATTAAGATGTTGTCGATGCTCTACTGA
CCCTGTTGGTGACTATTACATGAACAAAAACAACGTTTCAATGTGTCGTG
GTTGCAAAGAAGACGCCCCTTCCAACCTGACCGATAAAAATAAAAGCCCG
GGTACTTATGAACATAATGTTGGTCGAAATCGTAAAGTTCAATTTCATGG
ATCCTTCGGTGGACCACAAACACTACGCACATCCATTCAAACTATCTGCT
CTTCTGATGTCACTAAAACACCTGAAGACTTTCCGGGACCTCCATCGTTT
CAAGAGATCATTTCAAAACCACGTGAATTTACTGCGGATAAAAAACCTTT
CAGATCTGGATCGTCAAGATTCCCATTAATAAAACTTGAAAGTTTACCAG
GACCAGCTCATTCATTCACGAATTAGAATTAAAACCAACTTGCAAAAAAG
GTTATTCACTTGGTGCCAGAACAGCCCAACGCTTTCTTGAATTCAGGTTT
CCAATGTTTCCTTTGGTACAACATTATCAAGAGAACTTTTACCACTAAAA
ACACCACACACTAAGGCTGGTAATGAAATGTGTTTGCGTGGTGTACCCAA
TCTTGGACCAGGGTCTTATAAAAATGATGAGATGACGCTTGATCATGCTG
GCCGAATGAAGGAATTCTTATTGGATAACAAAAAAGCTGAAAACTGACAA
AGACATCAAGAAACAACGCATGCGTGAATCCTACTTCAGTTTATACTATT
AAATTTTGGAGTGGGTTTTTTAAAGTACGCGATTGTACTGGTATACATTC
ACACGAAGGGACAAGCGCCAAATTAAGATGTTGTCGATGCTCTACTGACC
CTGTTGGTGACTATTACATGAACAAAAACAACGTTTCAATGTGTCGTGGT
TGCAAAGAAGACGCCCCTTCCAACCTGACCGATAAAAATAAAAGCCCGGG
TACTTATGAACATAATGTTGGTCGAAATCGTAAAGTTCAATTTCATGGAT
CCTTCGGTGGACCACAAACACTACGCACATCCATTCAAACTATCTGCTCT
TCTGATGTCACTAAAACACCTGAAGACTTTCCGGGACCTCCATCGTTTCA
AGAGATCATTTCAAAACCACGTGAATTTACTGCGGATAAAAAACCTTTCA
GATCTGGATCGTCAAGATTCCCATTAATAAAACTTGAAAGTTTACCAGGA
CCAGCTCATTCATTCACGAATTAGAATTAAAACCAACTTGCAAAAAAGGT
TATTCACTTGGTGCCAGAACAGCCCAACGCTTTCTTGAATTCAGGTTTCC
AATGTTTCCTTTGGTACAACATTATCAAGAGAACTTTTACCACTAAAAAC
ACCACACACTAAGGCTGGTAATGAAATGTGTTTGCGTGGTGTACCCAATC
TTGGACCAGGGTCTTATAAAAATGATGAGATGACGCTTGATCATGCTGGC
CGAATGAAGGAATTCTTATTGGATAACAAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008166XLOC_008166Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014592-exon-sc0000190-1575043694:155466..156151TCONS_00014592-exon-sc0000190-1575043694:155466..156151Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1575043694:155068..155201TCONS_00014592-exon-sc0000190-1575043694:155068..155201Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1575043694:154657..154752TCONS_00014592-exon-sc0000190-1575043694:154657..154752Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1575043694:154129..154256TCONS_00014592-exon-sc0000190-1575043694:154129..154256Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1575043694:153558..153684TCONS_00014592-exon-sc0000190-1575043694:153558..153684Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1575043694:152807..152922TCONS_00014592-exon-sc0000190-1575043694:152807..152922Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1575043694:150761..150836TCONS_00014592-exon-sc0000190-1575043694:150761..150836Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1575043694:149848..150175TCONS_00014592-exon-sc0000190-1575043694:149848..150175Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1510915933:155466..156151TCONS_00014592-exon-sc0000190-1510915933:155466..156151Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1510915933:155068..155201TCONS_00014592-exon-sc0000190-1510915933:155068..155201Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1510915933:154657..154752TCONS_00014592-exon-sc0000190-1510915933:154657..154752Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1510915933:154129..154256TCONS_00014592-exon-sc0000190-1510915933:154129..154256Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1510915933:153558..153684TCONS_00014592-exon-sc0000190-1510915933:153558..153684Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1510915933:152807..152922TCONS_00014592-exon-sc0000190-1510915933:152807..152922Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1510915933:150761..150836TCONS_00014592-exon-sc0000190-1510915933:150761..150836Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1510915933:149848..150175TCONS_00014592-exon-sc0000190-1510915933:149848..150175Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1491911889:155466..156151TCONS_00014592-exon-sc0000190-1491911889:155466..156151Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1491911889:155068..155201TCONS_00014592-exon-sc0000190-1491911889:155068..155201Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1491911889:154657..154752TCONS_00014592-exon-sc0000190-1491911889:154657..154752Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1491911889:154129..154256TCONS_00014592-exon-sc0000190-1491911889:154129..154256Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1491911889:153558..153684TCONS_00014592-exon-sc0000190-1491911889:153558..153684Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1491911889:152807..152922TCONS_00014592-exon-sc0000190-1491911889:152807..152922Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1491911889:150761..150836TCONS_00014592-exon-sc0000190-1491911889:150761..150836Clytia hemisphaericaexon
TCONS_00014592-exon-sc0000190-1491911889:149848..150175TCONS_00014592-exon-sc0000190-1491911889:149848..150175Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014592-proteinTCONS_00014592-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000190supercontigsc0000190:149848..156151 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.7117	31.4216	20.2475	19.5173	112.475	88.6494	55.738	61.344	32.0146	43.3284	32.2572	27.7254	6.84609	6.15075	4.96159	5.51419	3.88173	6.06008	14.2253	11.0778	5.0689	4.70778	14.9318	14.0992	67.8799	45.7169	35.4841	43.2645	12.435	12.5881
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR010736SHIPPO-rpt
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014592 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top