TCONS_00013898 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013898
Unique NameTCONS_00013898
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2421

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013898 ID=TCONS_00013898|Name=TCONS_00013898|organism=Clytia hemisphaerica|type=transcript|length=2421bp
CAACAATACAATCGTAGGATGAAGTCTTCAAGCAAGTGAGACTATTTCTA
GAAAGATGACAACAGGTTAAAGGAATGCAATGAGCGTaggttttttttga
aagaatcaAACAATTGACGGACGGAATTGAAATTGTCTATTAAGAAAGCC
CAACCAACGCGATGAAATATATAAAGCGAGGCATTTTGATTTCGTCAAAT
ATATCAGTTGTCATACCGTAAAGCATGGAAACATTTTGATAATAAGATAA
GACCTATTGTAAAGTTCATATAAATACACACGGCTTTCTTTGTATTATTA
ACAACGAGGACAAGACATTATAAAAATACCTTGTGCATTTTGAATGCGAT
CATAAAACTTTTCATACTCTCATTACAACTGATAGAGTTCGAATAATTGT
ACAAAGTGCAGATATACAACacgttttttgataaaatcacaTATGTTAAG
TTTGAAGAAGACattatcaaatttttctttgaatcaaGATAAGAAGATGA
GTCCTTCTGTTGTTTTGGAAACTCCAGTGATGGAGAACAAACCGTTCTTG
ATTCGCGATCCGATGCTAATGGAAGACGCCATCTTCATGAAAGAACAAGA
TGACGATGATTTCAGCACCGACTCCTGGGAACGAATCTCAAACGAAGAAT
TAGATGATTTCGTGCAAATCTCCAACACAATAAGCAGTCCACCGACGTCT
CCAGCTACTTCCACTGAAAGTATTGGTAATGGCTTCAATGGTGGTTTATT
GGGAGGATCTACAGATTCGGAAGACACTTTCAAAGCATTGAGCCAACTTG
ATGACGATCCACCAATACTGATCAAAATGGAATCAGAGCAATCACCATTA
AGTATGTCGACCTTCAGCATGTCATCATCACCACCATCATTCTTGGATAC
TGCGCCGTCTCCATTGATGAACTCAAccaaacaacaacagcaacaacaac
aaaatccaCTAAATGATACACCAGAAACACGAGCCATGAAGCGGGAGCGT
AACCGTTTGGCTGCACGCAGATGTCGACAGAAACAAAAAGATCGAATTGA
TTATCTCGAAAAGGATGTCAAACAAATCGAAACGGACAATTTCAAAGTTG
AGAACGAAATCAAATTGTTACGGCAACAATTGAACGAATTACAAAGTGCT
TTAATTAACCACGACTGTATGTTAAAGCACGGTCTAACGCCAAGACAACA
TTACTATTCAGTCAAATTCTGAGCATAAGACCAGAAGAAGATGGCGGACG
AATGGCGAATAAGCGCTTATGCCTATCAACAGTTGCTAAGGAACACACTT
TTTCCAAAAGATGACAAACGTCATTGCAATATGGTAGCGTAATTATGCGA
ACCGTTGCCATGGAGATcgtaaacaaaaacaacaagatGATGGGGGTGCT
AAGTGACAAATTACTCGAATTATGCGAAGAATAATTTTTCCGTATTACAA
ATATGACCAACTTCATGGATGAATGTTACCCATGAGGAAGTAAGCCTTTG
GTCCACCCACATGGTTTTAATATCGATGGGTTCTTATTACCACAGAAACA
TGAATATTCACCTATAGCTTGGCTTTTACATGGAAATAAGACGCAAACAA
ACGCTTTAAAACTTATCTTTTCACTAAACGTAACGAACTTAgtgaattaa
agaaaaaagataaattttcaCATACTTTGGCTTGGTAGTATGAATGTTGA
TCTTTTGATGGTCCGCAAAGCACCATATTCTAGTCAACGCCACGCCACGC
CACGGGCGTTCACATCAACTGCCCAATCCACGAGAAGGAGATATCATAAT
AACATGACATCATTATTGAGTGATGATTCATAAATACACATAAACAAAAG
ACTGAAAAATAAATAGtacaaatattttaatatttccaCATCCAGTTTGT
AaatattaaaacttttttttNACTGAAAAATAAATAGtacaaatatttta
atatttccaCATCCAGTTTGtaaataataaaacttttttttttaaagaaa
ttgtatAAAATAGTATTTTAGTTGTCAAGATTTGTATGTCAATAAttcaa
agtaaaacaaaaaaaaatcacagtcAAATTTTGTTCGAAATTTGTCAATG
TTAACAAAAATATGCCTCTGCTCTGACCCTCAAGTTAATATGAGTTTTTt
ctaatcaaaatttaaaaactctataatttattgaaatttgagGAAATGTC
CTGCATTGGTAAAGACTAGAGATTAGCAACAGCTCTTACGTTGTCACTGA
GATAGTTTTGATATGAAAAATTACAATTATTCGAACAAAATATTTCTAGG
TAGGATAATAACTTTCTATACGATATTTTTTATGTAAGAgaagaaaataa
taaatataatatttggaatttatttatgtatattttgaaaggtgaaagaa
agaagaaagcaTAAAGTAAAT
Run BLAST on NCBI

protein sequence of TCONS_00013898-protein

>TCONS_00013898-protein ID=TCONS_00013898-protein|Name=TCONS_00013898-protein|organism=Clytia hemisphaerica|type=polypeptide|length=259bp
MLSLKKTLSNFSLNQDKKMSPSVVLETPVMENKPFLIRDPMLMEDAIFMK
EQDDDDFSTDSWERISNEELDDFVQISNTISSPPTSPATSTESIGNGFNG
GLLGGSTDSEDTFKALSQLDDDPPILIKMESEQSPLSMSTFSMSSSPPSF
LDTAPSPLMNSTKQQQQQQQNPLNDTPETRAMKRERNRLAARRCRQKQKD
RIDYLEKDVKQIETDNFKVENEIKLLRQQLNELQSALINHDCMLKHGLTP
RQHYYSVKF
Run BLAST on NCBI

transcript from alignment at sc0000174:548225..552525-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013898 ID=TCONS_00013898|Name=TCONS_00013898|organism=Clytia hemisphaerica|type=transcript|length=4301bp|location=Sequence derived from alignment at sc0000174:548225..552525- (Clytia hemisphaerica)
CAACAATACAATCGTAGGATGAAGTCTTCAAGCAAGTGAGACTATTTCTA
GAAAGATGACAACAGGTTAAAGGAATGCAATGAGCGTAGGTTTTTTTTGA
AAGAATCAAACAATTGACGGACGGAATTGAAATTGTCTATTAAGAAAGCC
CAACCAACGCGATGAAATATATAAAGCGAGGCATTTTGATTTCGTCAAAT
ATATCAGTTGTCATACCGTAAAGCATGGAAACATTTTGATAATAAGATAA
GACCTATTGTAAAGTTCATATAAATACACACGGCTTTCTTTGTATTATTA
ACAACGAGGACAAGACATTATAAAAATACCTTGTGCATTTTGAATGCGAT
CATAAAACTTTTCATACTCTCATTACAACTGATAGAGTTCGAATAATTGT
ACAAAGTGCAGATATACAACACGTTTTTTGATAAAATCACATATGTTAAG
TTTGAAGAAGACATTATCAAATTTTTCTTTGAATCAAGATAAGAAGATGA
GTCCTTCTGTTGTTTTGGAAACTCCAGTAAGTGTTGCAAACAGTTTTCAA
GCTGACACACAACTTTCTTTTTAACGTTCATAAATCATTCTATGAACGTT
TGGAATCTTAGCTGGACGTTCAAACAACGTTGCGTGGTAGTTGGTTCATG
AACGGAATTGAAATTCAACTAAAAACTCGATGCAAAAAGTTGGGCAACTT
TATCGAAAGCAAAGATATACAAAGTGTAGATCAACCTATATCTTTAAGCC
TTCTTTCTTCGACATTGCAAGAACTATAAAAGGAATGGGATATAAAAAAT
CAAGAAAATTGAGCCAAGCTATTCAAACCAAAACTTTAACCATTCCAATT
CTTTGTATTTTTTCCTTACAGGTGATGGAGAACAAACCGTTCTTGATTCG
CGATCCGATGCTAATGGAAGACGCCATCTTCATGAAAGAACAAGATGACG
ATGATTTCAGCACCGACTCCTGGGAACGAATCTCAAACGAAGAATTAGAT
GATTTCGTGCAAATCTCCAACACAATAAGCAGTCCACCGACGTCTCCAGC
TACTTCCACTGAAAGTATTGGTAATGGCTTCAATGGTGGTTTATTGGGAG
GATCTACAGATTCGGAAGACACTTTCAAAGCATTGAGCCAACTTGATGAC
GATCCACCAATACTGGTAAGATATAATGACACGTTAAAGCAACGTTTATC
TAACGTTCATGACATCCATATTTTGTTAGATTGAACGTTAAACCAAAGAA
GAGCCTAGAGCTAGTACAAGTATACACTCTTTCTTTTATAAGAACTATTT
TAAANCGTTAAACCAAAGAAGAGCCTGAAGCTAGTACAAGTATACACTCT
TTCTTTTATAAGAACTATTTTAAAGGACAATGAGGTTCAAAGTGCCAAAA
ATAAGAACAGCCAAGCCTAATAAAAACTTTACTGGTTCTTATAAAAAAAG
AGTGTATCATGCAAACGATCATGCACGAGAGAAAATTGTCTTAACTTTAG
ACTTCCAGATTGATTTACTGATAAACTAATTTTATAAGTCTTTCTCTGAG
GGTAGAAGATTGATTGAAAAGATAAAAAGCACCCTAATCAAACATACATA
AGGGTTTATCAGTGGGAACATTTGACGTCAAAGCTGCACTCTCTAAAATG
ACTAGTTCTTACCAAAATTTTCAAGAACTATCGTCATAAAGTGACAAGCT
TAAAAATTTTCGGACCAAGTTAACAATCAGAGAGATAAAAACATTTTATT
TGCATGCAAGCTATTACTCTTCAAAACAAATTTTTGTGTACTTTTTTGAC
AAATGTTTAATAAAATGTAAACAAACATGGTAGATAGGAGTAGTTGGGAA
GCAATTTTAATCCTGCCTGTGACGTCAATCAGAGGAAATCATTGCAACAT
AGTGTTTATTTTTTACGAGGGAGGATGAAAATGGAGAATGGTTAAAGTTG
CAACAGATAAAATTCTTTTCATCATCCGCCCCCTACATAAAGATTAAGGT
ACACACAAAAGTGTATGCAAAAAATTCTCTAAAATCACTTTTCATCAAAT
ATGGTGTTTGTTGCGAAACGCTAAAATGATTTCAATAGGCTTACGTCAGC
AAATTGCAGAAGCTAATATATAATACACGTAGAGCGGTAGAAATGGTATT
ATTTAATAAACGACCAATAACCACAAAGCATATAACACAGTGATAGGAGG
AAGAAAGAAACTCTGATTGATCATTTGAAAAACACATAAAAGAGGGAAGT
CTTCATAAGTGAAAAACAAACTTTTCTCAAATCAAGAAAAGAGGAAGAAT
TCAGTTTATTCGTTGGTGTGTGAATAGGACGACAGAAAGATGAGTCCTTC
TCATTTATTTCAGATCAAAATGGAATCAGAGCAATCACCATTAAGTATGT
CGACCTTCAGCATGTCATCATCACCACCATCATTCTTGGATACTGCGCCG
TCTCCATTGATGAACTCAACCAAACAACAACAGCAACAACAACAAAATCC
ACTAAATGATACACCAGAAACACGAGCCATGAAGCGGGAGCGTAACCGTT
TGGCTGCACGCAGATGTCGACAGAAACAAAAAGATCGAATTGATTATCTC
GAAAAGGTAAAAGTCTTTTCTGACTTTTTTTAAAGAAAATTGTTAAGTTT
CCATCGTTTATGGGTGTGGCTTATGAATCCAAATATAAACTGCAAGGGTG
GAGGTCGTCTAAATTTGAGAGCATTCGATACATTTCAATTAATCCTTAAA
ACACTTAGTAAATAAGTCTGCGACCGCAGTGTCGCAATCCACACGAAGGT
AGGGTAAGCCACTCTTTTTTTCTAGATTACTCCACTTATTAATTGACGCC
CATTATATGGGTGCTAAGTGACAAAACACTCGTTGACACTGACTTTTCCA
ACGACAATCCATTTCAATTTTTCCATCTCTAATTTTGTTATAGGATGTCA
AACAAATCGAAACGGACAATTTCAAAGTTGAGAACGAAATCAAATTGTTA
CGGCAACAATTGAACGAATTACAAAGTGCTTTAATTAACCACGACTGTAT
GTTAAAGCACGGTCTAACGCCAAGACAACATTACTATTCAGTCAAATTCT
GAGCATAAGACCAGAAGAAGATGGCGGACGAATGGCGAATAAGCGCTTAT
GCCTATCAACAGTTGCTAAGGAACACACTTTTTCCAAAAGATGACAAACG
TCATTGCAATATGGTAGCGTAATTATGCGAACCGTTGCCATGGAGATCGT
AAACAAAAACAACAAGATGATGGGGGTGCTAAGTGACAAATTACTCGAAT
TATGCGAAGAATAATTTTTCCGTATTACAAATATGACCAACTTCATGGAT
GAATGTTACCCATGAGGAAGTAAGCCTTTGGTCCACCCACATGGTTTTAA
TATCGATGGGTTCTTATTACCACAGAAACATGAATATTCACCTATAGCTT
GGCTTTTACATGGAAATAAGACGCAAACAAACGCTTTAAAACTTATCTTT
TCACTAAACGTAACGAACTTAGTGAATTAAAGAAAAAAGATAAATTTTCA
CATACTTTGGCTTGGTAGTATGAATGTTGATCTTTTGATGGTCCGCAAAG
CACCATATTCTAGTCAACGCCACGCCACGCCACGGGCGTTCACATCAACT
GCCCAATCCACGAGAAGGAGATATCATAATAACATGACATCATTATTGAG
TGATGATTCATAAATACACATAAACAAAAGACTGAAAAATAAATAGTACA
AATATTTTAATATTTCCACATCCAGTTTGTAAATATTAAAACTTTTTTTT
NACTGAAAAATAAATAGTACAAATATTTTAATATTTCCACATCCAGTTTG
TAAATAATAAAACTTTTTTTTTTAAAGAAATTGTATAAAATAGTATTTTA
GTTGTCAAGATTTGTATGTCAATAATTCAAAGTAAAACAAAAAAAAATCA
CAGTCAAATTTTGTTCGAAATTTGTCAATGTTAACAAAAATATGCCTCTG
CTCTGACCCTCAAGTTAATATGAGTTTTTTCTAATCAAAATTTAAAAACT
CTATAATTTATTGAAATTTGAGGAAATGTCCTGCATTGGTAAAGACTAGA
GATTAGCAACAGCTCTTACGTTGTCACTGAGATAGTTTTGATATGAAAAA
TTACAATTATTCGAACAAAATATTTCTAGGTAGGATAATAACTTTCTATA
CGATATTTTTTATGTAAGAGAAGAAAATAATAAATATAATATTTGGAATT
TATTTATGTATATTTTGAAAGGTGAAAGAAAGAAGAAAGCATAAAGTAAA
T

Coding sequence (CDS) from alignment at sc0000174:548225..552525-

>TCONS_00013898 ID=TCONS_00013898|Name=TCONS_00013898|organism=Clytia hemisphaerica|type=CDS|length=3120bp|location=Sequence derived from alignment at sc0000174:548225..552525- (Clytia hemisphaerica)
GATGTCAAACAAATCGAAACGGACAATTTCAAAGTTGAGAACGAAATCAA
ATTGTTACGGCAACAATTGAACGAATTACAAAGTGCTTTAATTAACCACG
ACTGTATGTTAAAGCACGGTCTAACGCCAAGACAACATTACTATTCAGTC
AAATTCTGAATCAAAATGGAATCAGAGCAATCACCATTAAGTATGTCGAC
CTTCAGCATGTCATCATCACCACCATCATTCTTGGATACTGCGCCGTCTC
CATTGATGAACTCAACCAAACAACAACAGCAACAACAACAAAATCCACTA
AATGATACACCAGAAACACGAGCCATGAAGCGGGAGCGTAACCGTTTGGC
TGCACGCAGATGTCGACAGAAACAAAAAGATCGAATTGATTATCTCGAAA
AGGTGATGGAGAACAAACCGTTCTTGATTCGCGATCCGATGCTAATGGAA
GACGCCATCTTCATGAAAGAACAAGATGACGATGATTTCAGCACCGACTC
CTGGGAACGAATCTCAAACGAAGAATTAGATGATTTCGTGCAAATCTCCA
ACACAATAAGCAGTCCACCGACGTCTCCAGCTACTTCCACTGAAAGTATT
GGTAATGGCTTCAATGGTGGTTTATTGGGAGGATCTACAGATTCGGAAGA
CACTTTCAAAGCATTGAGCCAACTTGATGACGATCCACCAATACTGATGT
TAAGTTTGAAGAAGACATTATCAAATTTTTCTTTGAATCAAGATAAGAAG
ATGAGTCCTTCTGTTGTTTTGGAAACTCCAGATGTCAAACAAATCGAAAC
GGACAATTTCAAAGTTGAGAACGAAATCAAATTGTTACGGCAACAATTGA
ACGAATTACAAAGTGCTTTAATTAACCACGACTGTATGTTAAAGCACGGT
CTAACGCCAAGACAACATTACTATTCAGTCAAATTCTGAATCAAAATGGA
ATCAGAGCAATCACCATTAAGTATGTCGACCTTCAGCATGTCATCATCAC
CACCATCATTCTTGGATACTGCGCCGTCTCCATTGATGAACTCAACCAAA
CAACAACAGCAACAACAACAAAATCCACTAAATGATACACCAGAAACACG
AGCCATGAAGCGGGAGCGTAACCGTTTGGCTGCACGCAGATGTCGACAGA
AACAAAAAGATCGAATTGATTATCTCGAAAAGGTGATGGAGAACAAACCG
TTCTTGATTCGCGATCCGATGCTAATGGAAGACGCCATCTTCATGAAAGA
ACAAGATGACGATGATTTCAGCACCGACTCCTGGGAACGAATCTCAAACG
AAGAATTAGATGATTTCGTGCAAATCTCCAACACAATAAGCAGTCCACCG
ACGTCTCCAGCTACTTCCACTGAAAGTATTGGTAATGGCTTCAATGGTGG
TTTATTGGGAGGATCTACAGATTCGGAAGACACTTTCAAAGCATTGAGCC
AACTTGATGACGATCCACCAATACTGATGTTAAGTTTGAAGAAGACATTA
TCAAATTTTTCTTTGAATCAAGATAAGAAGATGAGTCCTTCTGTTGTTTT
GGAAACTCCAGATGTCAAACAAATCGAAACGGACAATTTCAAAGTTGAGA
ACGAAATCAAATTGTTACGGCAACAATTGAACGAATTACAAAGTGCTTTA
ATTAACCACGACTGTATGTTAAAGCACGGTCTAACGCCAAGACAACATTA
CTATTCAGTCAAATTCTGAATCAAAATGGAATCAGAGCAATCACCATTAA
GTATGTCGACCTTCAGCATGTCATCATCACCACCATCATTCTTGGATACT
GCGCCGTCTCCATTGATGAACTCAACCAAACAACAACAGCAACAACAACA
AAATCCACTAAATGATACACCAGAAACACGAGCCATGAAGCGGGAGCGTA
ACCGTTTGGCTGCACGCAGATGTCGACAGAAACAAAAAGATCGAATTGAT
TATCTCGAAAAGGTGATGGAGAACAAACCGTTCTTGATTCGCGATCCGAT
GCTAATGGAAGACGCCATCTTCATGAAAGAACAAGATGACGATGATTTCA
GCACCGACTCCTGGGAACGAATCTCAAACGAAGAATTAGATGATTTCGTG
CAAATCTCCAACACAATAAGCAGTCCACCGACGTCTCCAGCTACTTCCAC
TGAAAGTATTGGTAATGGCTTCAATGGTGGTTTATTGGGAGGATCTACAG
ATTCGGAAGACACTTTCAAAGCATTGAGCCAACTTGATGACGATCCACCA
ATACTGATGTTAAGTTTGAAGAAGACATTATCAAATTTTTCTTTGAATCA
AGATAAGAAGATGAGTCCTTCTGTTGTTTTGGAAACTCCAGATGTCAAAC
AAATCGAAACGGACAATTTCAAAGTTGAGAACGAAATCAAATTGTTACGG
CAACAATTGAACGAATTACAAAGTGCTTTAATTAACCACGACTGTATGTT
AAAGCACGGTCTAACGCCAAGACAACATTACTATTCAGTCAAATTCTGAA
TCAAAATGGAATCAGAGCAATCACCATTAAGTATGTCGACCTTCAGCATG
TCATCATCACCACCATCATTCTTGGATACTGCGCCGTCTCCATTGATGAA
CTCAACCAAACAACAACAGCAACAACAACAAAATCCACTAAATGATACAC
CAGAAACACGAGCCATGAAGCGGGAGCGTAACCGTTTGGCTGCACGCAGA
TGTCGACAGAAACAAAAAGATCGAATTGATTATCTCGAAAAGGTGATGGA
GAACAAACCGTTCTTGATTCGCGATCCGATGCTAATGGAAGACGCCATCT
TCATGAAAGAACAAGATGACGATGATTTCAGCACCGACTCCTGGGAACGA
ATCTCAAACGAAGAATTAGATGATTTCGTGCAAATCTCCAACACAATAAG
CAGTCCACCGACGTCTCCAGCTACTTCCACTGAAAGTATTGGTAATGGCT
TCAATGGTGGTTTATTGGGAGGATCTACAGATTCGGAAGACACTTTCAAA
GCATTGAGCCAACTTGATGACGATCCACCAATACTGATGTTAAGTTTGAA
GAAGACATTATCAAATTTTTCTTTGAATCAAGATAAGAAGATGAGTCCTT
CTGTTGTTTTGGAAACTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007757XLOC_007757Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013898-exon-sc0000174-1575043694:552000..552525TCONS_00013898-exon-sc0000174-1575043694:552000..552525Clytia hemisphaericaexon
TCONS_00013898-exon-sc0000174-1575043694:551361..551654TCONS_00013898-exon-sc0000174-1575043694:551361..551654Clytia hemisphaericaexon
TCONS_00013898-exon-sc0000174-1575043694:549920..550162TCONS_00013898-exon-sc0000174-1575043694:549920..550162Clytia hemisphaericaexon
TCONS_00013898-exon-sc0000174-1575043694:548225..549582TCONS_00013898-exon-sc0000174-1575043694:548225..549582Clytia hemisphaericaexon
TCONS_00013898-exon-sc0000174-1510915933:552000..552525TCONS_00013898-exon-sc0000174-1510915933:552000..552525Clytia hemisphaericaexon
TCONS_00013898-exon-sc0000174-1510915933:551361..551654TCONS_00013898-exon-sc0000174-1510915933:551361..551654Clytia hemisphaericaexon
TCONS_00013898-exon-sc0000174-1510915933:549920..550162TCONS_00013898-exon-sc0000174-1510915933:549920..550162Clytia hemisphaericaexon
TCONS_00013898-exon-sc0000174-1510915933:548225..549582TCONS_00013898-exon-sc0000174-1510915933:548225..549582Clytia hemisphaericaexon
TCONS_00013898-exon-sc0000174-1491911889:552000..552525TCONS_00013898-exon-sc0000174-1491911889:552000..552525Clytia hemisphaericaexon
TCONS_00013898-exon-sc0000174-1491911889:551361..551654TCONS_00013898-exon-sc0000174-1491911889:551361..551654Clytia hemisphaericaexon
TCONS_00013898-exon-sc0000174-1491911889:549920..550162TCONS_00013898-exon-sc0000174-1491911889:549920..550162Clytia hemisphaericaexon
TCONS_00013898-exon-sc0000174-1491911889:548225..549582TCONS_00013898-exon-sc0000174-1491911889:548225..549582Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013898-proteinTCONS_00013898-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000174supercontigsc0000174:548225..552525 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0710665	0.808337	0.537537	1.81321	3.0356	1.45672	27.2066	6.79209	24.682	7.4119	5.28292	9.40138	1.98398	0.732895	2.98824	14.4041	16.7658	8.18502	11.8275	0.840447	0.716283	1.4739	2.1784	10.5798	9.8065	18.044	6.29702
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002112Leuzip_Jun
IPR004827bZIP
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013898 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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