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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00013898-protein ID=TCONS_00013898-protein|Name=TCONS_00013898-protein|organism=Clytia hemisphaerica|type=polypeptide|length=259bp
MLSLKKTLSNFSLNQDKKMSPSVVLETPVMENKPFLIRDPMLMEDAIFMK
EQDDDDFSTDSWERISNEELDDFVQISNTISSPPTSPATSTESIGNGFNG
GLLGGSTDSEDTFKALSQLDDDPPILIKMESEQSPLSMSTFSMSSSPPSF
LDTAPSPLMNSTKQQQQQQQNPLNDTPETRAMKRERNRLAARRCRQKQKD
RIDYLEKDVKQIETDNFKVENEIKLLRQQLNELQSALINHDCMLKHGLTP
RQHYYSVKF Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0003677 |
DNA binding |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 195..236 |
| None | No IPR available | GENE3D | 1.20.5.170 | | coord: 162..242
e-value: 3.8E-13
score: 48.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 136..181 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 77..110 |
| None | No IPR available | CDD | cd14699 | bZIP_Fos_like | coord: 180..237
e-value: 3.02096E-14
score: 64.2036 |
| None | No IPR available | SUPERFAMILY | 57959 | Leucine zipper domain | coord: 180..236 |
| IPR002112 | Transcription factor Jun | PRINTS | PR00043 | LEUZIPPRJUN | coord: 219..233
score: 29.02
coord: 204..216
score: 38.91
coord: 186..202
score: 53.98 |
| IPR004827 | Basic-leucine zipper domain | SMART | SM00338 | brlzneu | coord: 175..239
e-value: 9.4E-10
score: 48.4 |
| IPR004827 | Basic-leucine zipper domain | PFAM | PF00170 | bZIP_1 | coord: 180..235
e-value: 1.8E-9
score: 37.4 |
| IPR004827 | Basic-leucine zipper domain | PROSITE | PS00036 | BZIP_BASIC | coord: 183..197 |
| IPR004827 | Basic-leucine zipper domain | PROSITE | PS50217 | BZIP | coord: 177..240
score: 11.921 |
Blast
The following BLAST results are available for this feature:
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