TCONS_00006873 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00006873
Unique Name	TCONS_00006873
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1404

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000072:238298..243482+
coding sequence from alignment at sc0000072:238298..243482+

transcript sequence

>TCONS_00006873 ID=TCONS_00006873|Name=TCONS_00006873|organism=Clytia hemisphaerica|type=transcript|length=1404bp
ttcgttCTTTCTATGCAGAGAACTGGGACGACTGGGCTGGTTACCAAAGC
AACGAACAACAAGAACAACAACAAGAAGGTAAAAATGAAGAGCTAAGTGA
GCAAAGTGAGGAAGACGGCAGAGGCGACGAAATGGAAGAATATATGGAGG
ATGCTGAAGGTGGCTACGAAGGGCATTGTGAGGACGATGATTTTAATATG
GACGCTGATTACGTTGACACGCGGTCCGCCaagaaaaagatgaaagaaAA
ACGAGCTCTGCTGTCAGGAAAGAACAAAAAGCAATCCAAATTCCTGGAAG
CCATTCAAAAGAAGAAACCGGTCTTCGATCCAAAGGACAAGAcatttgaa
gaatattttgacGAGTATTACAAATTGGACTTTGAAGACATTGTCGGTGA
TATGCCGGTCAGATTCCAATACCGACAGGTGATGGCTAACAATTATGGAC
TCTCTACAAATGAGATTTTAGATGCAGAAAATCGTGAGCTGAACGAATGG
TGTTCTTTGAAGCGTGTTATACGTTACAACACTGAAGCAGAAGAACAAAG
TGAACgtcaaaaatacaagaaaaaatcaCGGAACAAACAGAAGAAAGAAA
TCGTCTTCTCCTCGCTGACGAAGAAAGCGCAGGAGAATGAAAACGAGGCC
CCGGTTGGTGATATTGGGTCCGGACAAGGGTCCAGCAAACAAGATGGAAG
AAAAGCGAATACTCAtTCGAAGAATAAGCATACGTCAAAGAGCAATCAAA
ACCTCGACAAAACGAAATCACCAgggaaacaaaaacaaaaacaaatcaag
aATAACAACGTACCGCAGAATAAACGCGGGTTCAATGCGAACAAAACGCA
GAAACAAAATAAACCAGAGAGGAATAAAACCGCGTTAAACCAACTGAACA
CGCAGAGTAAACGAGGTTTTAAGAAAAGACTTCAACCGAAATTAGGTGGT
TCTAATCATTCATTGACCATATCTTCAACTAAACAACGCAAGATTATGAA
GCAATTCAAAGGAGCCAATAAAGACGTTATGAATAAACTTTCAAGCGGTC
GCTTAGCGGCATACGGTTTGGATAAAAGGAAGAAGGGAAAAGAAGATTGA
GCTTAGGTAACGTCTCATCCTCTAAATGCTctttttgttttaacttttat
GAACTTTTATATAAATTTGTATTAGAAACTAATGCTTTTTGGAATGCAAA
GTTACATTTAATTCAATGTAATTAATATACGGAAAGAACGATGAGAAAGA
ATTTCGCCCCACATTTTCGAAACCAAAAAAGACCCTGGACCAACCACCGA
CGGGGACGAGCCGTTAGATCTTGAAAAATGTACACAGCTAAACGAAATAC
TGAACCTGAAAGACCATATTACATATTAGTACCTGACTCgctgatgaaat
tttg

Run BLAST on NCBI

protein sequence of TCONS_00006873-protein

>TCONS_00006873-protein ID=TCONS_00006873-protein|Name=TCONS_00006873-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
RSFYAENWDDWAGYQSNEQQEQQQEGKNEELSEQSEEDGRGDEMEEYMED
AEGGYEGHCEDDDFNMDADYVDTRSAKKKMKEKRALLSGKNKKQSKFLEA
IQKKKPVFDPKDKTFEEYFDEYYKLDFEDIVGDMPVRFQYRQVMANNYGL
STNEILDAENRELNEWCSLKRVIRYNTEAEEQSERQKYKKKSRNKQKKEI
VFSSLTKKAQENENEAPVGDIGSGQGSSKQDGRKANTHSKNKHTSKSNQN
LDKTKSPGKQKQKQIKNNNVPQNKRGFNANKTQKQNKPERNKTALNQLNT
QSKRGFKKRLQPKLGGSNHSLTISSTKQRKIMKQFKGANKDVMNKLSSGR
LAAYGLDKRKKGKED

Run BLAST on NCBI

transcript from alignment at sc0000072:238298..243482+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00006873 ID=TCONS_00006873|Name=TCONS_00006873|organism=Clytia hemisphaerica|type=transcript|length=5185bp|location=Sequence derived from alignment at sc0000072:238298..243482+ (Clytia hemisphaerica)
ttcgttCTTTCTATGCAGAGAACTGGGACGACTGGGCTGGTTACCAAAGC
AACGAACAACAAGAACAACAACAAGAAGGTAAAAATGAAGAGCTAAGTGA
GCAAAGTAAGTGTGTTTAAGTGATACTTCATTTTAGCAAtatcaaaaaag
gtaaaaaaacctcggtaggccatttttcatgtccTTTAAAGCATTCGGTT
ATTGGACGCCACCCCTCCtgaaataattaaaattttgttaaatacagcct
ttttagtggaaaaacactAGAAAAGGTGCCCtctttttggccaccaacgg
acgctgTCTTGCCTTTCTTAAACATGGCCTGCTCGGgctattttttcgaa
aattgccctcaaattcaaatacaattttTAACACTAAACATAAATAACTG
TTATTAATTTTTACAATTATACTTCAGGTGAGGAAGACGGCAGAGGCGAC
GAAATGGAAGAATATATGGAGGATGCTGAAGGTGGCTACGAAGGGCATTG
TGAGGACGATGATTTTAATGTAAGTACTATCCTAAATAAGTTTAAACTTG
TCAACTCGGTGTCTACTCTGTACCATACAGAGTGTATCTCTTGTATGACG
TAGCGTAGTACACCTCTACGGCAATAGAATTTCTGTAGATGTCGTCTCTC
TGTAAAGCCTGAATGTTCTACTTGACGCCAGAGtgcaataaattttgaaa
tttccgtaGATGTCGGGTCTGTTTACAGACAAGTAAGAGTCAAGTAACAG
TGTTACTCTCACTTGAAGTTattcgtggcttggatcacgagttTTGCGTT
TGATGATGTGCGTTTTAACGTGAAGCTTAACTTTTTCTGAGTTTTCGGAC
GACATATGGCCTTCTTAGAtgattgaattttcaaaaacaactcCTAGGAT
CTTCGAAATTAATTACCGTATTCAACAGGCGACCAACAAATTCGCAGAAA
TGACCAATCTTCTTCAAAAATTGCAATACCTCTTTGAAAACTCGTACTAT
CTTCCTCAAAAGTTATATATGGGATTTGACTGAAACAATCGTTTAGTTTC
AATCTCTGTCTCATTTACTCATTAGATGGACGCTGATTACGTTGACACGC
GGTCCGCCaagaaaaagatgaaagaaAAACGAGCTCTGCTGTCAGGAAAG
AACAAAAAGCAATCCAAATTCCTGGAAGCCATTCAAAAGAAGAAACCGGT
CTTCGATCCAAGTATGACAAATGTTTTGAGATTCAACTCTCCTACTATAC
CTCGATTGCATTAAACTTCgctaaattttcgcgagatctagttttcgttt
tcgttttcgtttttgcatttttcgcgaaaataaaactgggtaatcgtttg
aaattgctgacttgcgaaattaaatctacATGAAACTTTCAAGTTCAGAT
TTTAGACTAAAGGTTTCTTGTAGATTTTCCATTTCTGACACGAATGGGCC
AGTTTCAATTAATCAAATACTGAAGGAGAACGCaaattttttcgagttaa
ggaaatttcttATGGAATATAGTTTGTAAGGCGTTGTCAATAACTGAGGG
GACCattaaacttgttcgagttaaggaggcattcgagttatagaggttcc
agTTAAAGAGGTTGGAGTTAAAGAGATACCACTGTACTGTATTATAACTT
AACACAAATGCTTGTTGTTGTCAATTTCAGAGGACAAGAcatttgaagaa
tattttgacGAGTATTACAAATTGGACTTTGAAGACATTGTCGGTGATAT
GCCGGTCAGATTCCAATACCGACAGGTGATGGCTAACAATTATGGACTCT
CTACAAATGAGGTACGAGCCTTTTTTAAACAACTGCCTTTCATGTACACA
CCCATGTCTCATAGCCCCAGGGAAATTTTTCTCTCAGTGAGGAGAGAATT
AGCTAACTTATATTACTTATAACTTGCTTGCTTacttattctcaacttca
gttgagctagaatctgacaaggtctgtatgtatgtctgtatgtatgtctg
cctgtatgtccgtccgaaaaatttggggcagcctggagacttcaaaaatt
gttcgatttggctgaaattttgcacacttgttccttgggtgaatatctgg
gggcgtttttttaatttttcaaaaatttgggatttttggggcctggggac
gagttttttgccaaaacgaggctaaaacttggtattcacccaaggaacaa
gtgtaccaaatttcagccaaaatgaaCAAAGTTATCATATTTGCTACGTA
ATaccaaatatttgaaatgttataaTTGGGCTTTCGAATAACAAAATATC
TGAAATTGAGCCGGCAGTGTGGTGCGCAGGTTCGACTATATTATTAGGGG
TGTTTGATTAATCCGATTAGACTAGGTTTTAGTCGTACCTCGAGTTTTTT
ACTATTATTAACACGACAGAGGAACCTACTTTACTCTCCGTACTTACTGT
ATATTGATATttaattttccgattttctctGCTTGCAGATTTTAGATGCA
GAAAATCGTGAGCTGAACGAATGGTGTTCTTTGAAGCGTGTTATACGTTA
CAAGTAAGTCATTCAATCTACAATCTCTATCACTCGAACACGCAGGAGAA
ACacaattttgttcgatttaaggaaAATCCGAGTTATGGAGTAGTCCTAT
CTGAAGGGACCagcaaacttgttcgagttatagggTATCGAGTTGAATAG
ACTCTACTGCAGAACTGTTATTCTTTGCGTGTCATCTAGTGTTTTTAGTG
TTTCTACAGAATGAGAAAATTGTCTGATCTGAATAAAGCTGTTTTCATAT
GTGGGTTAGTTAAAATCTTTACCATATTTTTCTCAGCTATTTTCCGGTTA
TTTAGATATTTTGGATAATGTGTCTTTTTAGAAAAGTTTCTGACTGGTTT
CTCAGATTTGTCAGACTACAAATAAGGCAGGGACGGCAGCAAAATCTTCA
GAAGGTTTTTAGCTTCTAGTCTtaaaatacagttgacactttttaatttg
ATCTGCAAGGAACCAACGATCTTCGATTCGATTTACAGAGAGTATTTACA
CGACTTTTCATCTGGTCCCCAGCatcagttcgaattacagataAATTCAA
ACAATAAAGGTTCGAAGTAGAGAGAAAGTTGATTGCAAGACAATCCTTAA
AAATCTTATTTCGtgatacagttgactctctctaattcgatgttcaACGG
ACCAAAAACTtacttcgaattagagaaagactTGAATTACAGAGATTGAT
TCACACCACTTCCCAGGTGAGGGGACCANCCAAAAACTtacttcgaatta
gagaaagactTGAATTACAGAGATTGATTCACACCACTCCCTAggtgagg
ggaccaatattttactagttcgaattacagaaagattcgaataatagagg
ttcaaattcatgatattcacgacgtaatgttttctacggaaagaccccgg
ttttagACAGTGGTGGCAAaattaaactagacaaaagttgtataaaattt
gccattactggcaaaaaccggggtctttccgtaaaaaaaacattacgtca
ttaatATCATTAATAAAGAGAGAGATGAATGGAAGACAATCCTTAAAATT
TGAACCCGCGATATTCTTCTATTTGAAGCACTGAAGCAGAAGAACAAAGT
GAACgtcaaaaatacaagaaaaaatcaCGGAACAAACAGAAGAAAGAAAT
CGTCTTCTCCTCGCTGACGAAGAAAGCGCAGGAGAATGAAAACGAGGCCC
CGGTTGGTGATATTGGGTCCGGACAAGGGTCCAGCAAACAAGATGGAAGA
AAAGCGAATACTCAGTAAGTTgtcttaatattttttaatgtgaCCTGTTC
TTTTAAATGCTGCCATGTAGAAACATTTTAGTGTAGCTATAGTAATTCCC
TTGAGAGTAAGGTAGCCCGAGGTTCACTTaaatctttttataaatttgaC
GGTATGAGTAAACTTTTATTCGAAAATAAGGGGTTGCTAttcatgtttgt
ttctcattgtttttaattatatttttcaacaaagTTCAGCAAGAAGttct
ttaggcgtacaaactttcgcgagcagaaactttcgcgaggtcaaaaaatc
gcgaaatttgcgACATTTACTTTGGCGAATTTGAGGAACTAAtctttttc
gcgagcataaactttcgcgaatcgttagataaaaatgagaattttcgaat
aaaatttgccttaaaagtgaaaattattCCTTTAAATCCGCTAAAGACGG
TTGCTCTTCAACTCTAAAAAGGTATTACAGGATAATAGTATgcagaaaat
ttgatatttattacgatttcgatttccaatttttttgagaatttttcgcg
agcataaacctTCGCGAATTatcctgttaagaattttcaaagacatttac
ttccgcgaaaaaggccaaaattcgcgaaaatcgaagccttatgttctgat
atagtttggttatttatttatttatttatttattgtatatttttagtTCG
AAGAATAAGCATACGTCAAAGAGCAATCAAAACCTCGACAAAACGAAATC
ACCAgggaaacaaaaacaaaaacaaatcaagaATAACAACGTACCGCAGA
ATAAACGCGGGTTCAATGCGAACAAAACGCAGAAACAAAATAAACCAGAG
AGGAATAAAACCGCGTTAAACCAACTGAACACGCAGAGTAAACGAGGTTT
TAAGAAAAGACTTCAACCGAAATTAGGTGGTTCTAATCATTCATTGACCA
TATCTTCAACTAAACAACGCAAGATTATGAAGCAATTCAAAGGAGCCAAT
AAAGACGTTATGAATAAACTTTCAAGCGGTCGCTTAGCGGCATACGGTTT
GGATAAAAGGAAGAAGGGAAAAGAAGATTGAGCTTAGGTAACGTCTCATC
CTCTAAATGCTctttttgttttaacttttatGAACTTTTATATAAATTTG
TATTAGAAACTAATGCTTTTTGGAATGCAAAGTTACATTTAATTCAATGT
AATTAATATACGGAAAGAACGATGAGAAAGAATTTCGCCCCACATTTTCG
AAACCAAAAAAGACCCTGGACCAACCACCGACGGGGACGAGCCGTTAGAT
CTTGAAAAATGTACACAGCTAAACGAAATACTGAACCTGAAAGACCATAT
TACATATTAGTACCTGACTCgctgatgaaattttg

Coding sequence (CDS) from alignment at sc0000072:238298..243482+

>TCONS_00006873 ID=TCONS_00006873|Name=TCONS_00006873|organism=Clytia hemisphaerica|type=CDS|length=7686bp|location=Sequence derived from alignment at sc0000072:238298..243482+ (Clytia hemisphaerica)
cgttCTTTCTATGCAGAGAACTGGGACGACTGGGCTGGTTACCAAAGCAA
CGAACAACAAGAACAACAACAAGAAGGTAAAAATGAAGAGCTAAGTGAGC
AAAGTGAGGAAGACGGCAGAGGCGACGAAATGGAAGAATATATGGAGGAT
GCTGAAGGTGGCTACGAAGGGCATTGTGAGGACGATGATTTTAATATGGA
CGCTGATTACGTTGACACGCGGTCCGCCaagaaaaagatgaaagaaAAAC
GAGCTCTGCTGTCAGGAAAGAACAAAAAGCAATCCAAATTCCTGGAAGCC
ATTCAAAAGAAGAAACCGGTCTTCGATCCAAAGGACAAGAcatttgaaga
atattttgacGAGTATTACAAATTGGACTTTGAAGACATTGTCGGTGATA
TGCCGGTCAGATTCCAATACCGACAGGTGATGGCTAACAATTATGGACTC
TCTACAAATGAGATTTTAGATGCAGAAAATCGTGAGCTGAACGAATGGTG
TTCTTTGAAGCGTGTTATACGTTACAACACTGAAGCAGAAGAACAAAGTG
AACgtcaaaaatacaagaaaaaatcaCGGAACAAACAGAAGAAAGAAATC
GTCTTCTCCTCGCTGACGAAGAAAGCGCAGGAGAATGAAAACGAGGCCCC
GGTTGGTGATATTGGGTCCGGACAAGGGTCCAGCAAACAAGATGGAAGAA
AAGCGAATACTCAtTCGAAGAATAAGCATACGTCAAAGAGCAATCAAAAC
CTCGACAAAACGAAATCACCAgggaaacaaaaacaaaaacaaatcaagaA
TAACAACGTACCGCAGAATAAACGCGGGTTCAATGCGAACAAAACGCAGA
AACAAAATAAACCAGAGAGGAATAAAACCGCGTTAAACCAACTGAACACG
CAGAGTAAACGAGGTTTTAAGAAAAGACTTCAACCGAAATTAGGTGGTTC
TAATCATTCATTGACCATATCTTCAACTAAACAACGCAAGATTATGAAGC
AATTCAAAGGAGCCAATAAAGACGTTATGAATAAACTTTCAAGCGGTCGC
TTAGCGGCATACGGTTTGGATAAAAGGAAGAAGGGAAAAGAAGATTGAcg
ttCTTTCTATGCAGAGAACTGGGACGACTGGGCTGGTTACCAAAGCAACG
AACAACAAGAACAACAACAAGAAGGTAAAAATGAAGAGCTAAGTGAGCAA
AGTGAGGAAGACGGCAGAGGCGACGAAATGGAAGAATATATGGAGGATGC
TGAAGGTGGCTACGAAGGGCATTGTGAGGACGATGATTTTAATATGGACG
CTGATTACGTTGACACGCGGTCCGCCaagaaaaagatgaaagaaAAACGA
GCTCTGCTGTCAGGAAAGAACAAAAAGCAATCCAAATTCCTGGAAGCCAT
TCAAAAGAAGAAACCGGTCTTCGATCCAAAGGACAAGAcatttgaagaat
attttgacGAGTATTACAAATTGGACTTTGAAGACATTGTCGGTGATATG
CCGGTCAGATTCCAATACCGACAGGTGATGGCTAACAATTATGGACTCTC
TACAAATGAGATTTTAGATGCAGAAAATCGTGAGCTGAACGAATGGTGTT
CTTTGAAGCGTGTTATACGTTACAACACTGAAGCAGAAGAACAAAGTGAA
CgtcaaaaatacaagaaaaaatcaCGGAACAAACAGAAGAAAGAAATCGT
CTTCTCCTCGCTGACGAAGAAAGCGCAGGAGAATGAAAACGAGGCCCCGG
TTGGTGATATTGGGTCCGGACAAGGGTCCAGCAAACAAGATGGAAGAAAA
GCGAATACTCAtTCGAAGAATAAGCATACGTCAAAGAGCAATCAAAACCT
CGACAAAACGAAATCACCAgggaaacaaaaacaaaaacaaatcaagaATA
ACAACGTACCGCAGAATAAACGCGGGTTCAATGCGAACAAAACGCAGAAA
CAAAATAAACCAGAGAGGAATAAAACCGCGTTAAACCAACTGAACACGCA
GAGTAAACGAGGTTTTAAGAAAAGACTTCAACCGAAATTAGGTGGTTCTA
ATCATTCATTGACCATATCTTCAACTAAACAACGCAAGATTATGAAGCAA
TTCAAAGGAGCCAATAAAGACGTTATGAATAAACTTTCAAGCGGTCGCTT
AGCGGCATACGGTTTGGATAAAAGGAAGAAGGGAAAAGAAGATTGAcgtt
CTTTCTATGCAGAGAACTGGGACGACTGGGCTGGTTACCAAAGCAACGAA
CAACAAGAACAACAACAAGAAGGTAAAAATGAAGAGCTAAGTGAGCAAAG
TGAGGAAGACGGCAGAGGCGACGAAATGGAAGAATATATGGAGGATGCTG
AAGGTGGCTACGAAGGGCATTGTGAGGACGATGATTTTAATATGGACGCT
GATTACGTTGACACGCGGTCCGCCaagaaaaagatgaaagaaAAACGAGC
TCTGCTGTCAGGAAAGAACAAAAAGCAATCCAAATTCCTGGAAGCCATTC
AAAAGAAGAAACCGGTCTTCGATCCAAAGGACAAGAcatttgaagaatat
tttgacGAGTATTACAAATTGGACTTTGAAGACATTGTCGGTGATATGCC
GGTCAGATTCCAATACCGACAGGTGATGGCTAACAATTATGGACTCTCTA
CAAATGAGATTTTAGATGCAGAAAATCGTGAGCTGAACGAATGGTGTTCT
TTGAAGCGTGTTATACGTTACAACACTGAAGCAGAAGAACAAAGTGAACg
tcaaaaatacaagaaaaaatcaCGGAACAAACAGAAGAAAGAAATCGTCT
TCTCCTCGCTGACGAAGAAAGCGCAGGAGAATGAAAACGAGGCCCCGGTT
GGTGATATTGGGTCCGGACAAGGGTCCAGCAAACAAGATGGAAGAAAAGC
GAATACTCAtTCGAAGAATAAGCATACGTCAAAGAGCAATCAAAACCTCG
ACAAAACGAAATCACCAgggaaacaaaaacaaaaacaaatcaagaATAAC
AACGTACCGCAGAATAAACGCGGGTTCAATGCGAACAAAACGCAGAAACA
AAATAAACCAGAGAGGAATAAAACCGCGTTAAACCAACTGAACACGCAGA
GTAAACGAGGTTTTAAGAAAAGACTTCAACCGAAATTAGGTGGTTCTAAT
CATTCATTGACCATATCTTCAACTAAACAACGCAAGATTATGAAGCAATT
CAAAGGAGCCAATAAAGACGTTATGAATAAACTTTCAAGCGGTCGCTTAG
CGGCATACGGTTTGGATAAAAGGAAGAAGGGAAAAGAAGATTGAcgttCT
TTCTATGCAGAGAACTGGGACGACTGGGCTGGTTACCAAAGCAACGAACA
ACAAGAACAACAACAAGAAGGTAAAAATGAAGAGCTAAGTGAGCAAAGTG
AGGAAGACGGCAGAGGCGACGAAATGGAAGAATATATGGAGGATGCTGAA
GGTGGCTACGAAGGGCATTGTGAGGACGATGATTTTAATATGGACGCTGA
TTACGTTGACACGCGGTCCGCCaagaaaaagatgaaagaaAAACGAGCTC
TGCTGTCAGGAAAGAACAAAAAGCAATCCAAATTCCTGGAAGCCATTCAA
AAGAAGAAACCGGTCTTCGATCCAAAGGACAAGAcatttgaagaatattt
tgacGAGTATTACAAATTGGACTTTGAAGACATTGTCGGTGATATGCCGG
TCAGATTCCAATACCGACAGGTGATGGCTAACAATTATGGACTCTCTACA
AATGAGATTTTAGATGCAGAAAATCGTGAGCTGAACGAATGGTGTTCTTT
GAAGCGTGTTATACGTTACAACACTGAAGCAGAAGAACAAAGTGAACgtc
aaaaatacaagaaaaaatcaCGGAACAAACAGAAGAAAGAAATCGTCTTC
TCCTCGCTGACGAAGAAAGCGCAGGAGAATGAAAACGAGGCCCCGGTTGG
TGATATTGGGTCCGGACAAGGGTCCAGCAAACAAGATGGAAGAAAAGCGA
ATACTCAtTCGAAGAATAAGCATACGTCAAAGAGCAATCAAAACCTCGAC
AAAACGAAATCACCAgggaaacaaaaacaaaaacaaatcaagaATAACAA
CGTACCGCAGAATAAACGCGGGTTCAATGCGAACAAAACGCAGAAACAAA
ATAAACCAGAGAGGAATAAAACCGCGTTAAACCAACTGAACACGCAGAGT
AAACGAGGTTTTAAGAAAAGACTTCAACCGAAATTAGGTGGTTCTAATCA
TTCATTGACCATATCTTCAACTAAACAACGCAAGATTATGAAGCAATTCA
AAGGAGCCAATAAAGACGTTATGAATAAACTTTCAAGCGGTCGCTTAGCG
GCATACGGTTTGGATAAAAGGAAGAAGGGAAAAGAAGATTGAcgttCTTT
CTATGCAGAGAACTGGGACGACTGGGCTGGTTACCAAAGCAACGAACAAC
AAGAACAACAACAAGAAGGTAAAAATGAAGAGCTAAGTGAGCAAAGTGAG
GAAGACGGCAGAGGCGACGAAATGGAAGAATATATGGAGGATGCTGAAGG
TGGCTACGAAGGGCATTGTGAGGACGATGATTTTAATATGGACGCTGATT
ACGTTGACACGCGGTCCGCCaagaaaaagatgaaagaaAAACGAGCTCTG
CTGTCAGGAAAGAACAAAAAGCAATCCAAATTCCTGGAAGCCATTCAAAA
GAAGAAACCGGTCTTCGATCCAAAGGACAAGAcatttgaagaatattttg
acGAGTATTACAAATTGGACTTTGAAGACATTGTCGGTGATATGCCGGTC
AGATTCCAATACCGACAGGTGATGGCTAACAATTATGGACTCTCTACAAA
TGAGATTTTAGATGCAGAAAATCGTGAGCTGAACGAATGGTGTTCTTTGA
AGCGTGTTATACGTTACAACACTGAAGCAGAAGAACAAAGTGAACgtcaa
aaatacaagaaaaaatcaCGGAACAAACAGAAGAAAGAAATCGTCTTCTC
CTCGCTGACGAAGAAAGCGCAGGAGAATGAAAACGAGGCCCCGGTTGGTG
ATATTGGGTCCGGACAAGGGTCCAGCAAACAAGATGGAAGAAAAGCGAAT
ACTCAtTCGAAGAATAAGCATACGTCAAAGAGCAATCAAAACCTCGACAA
AACGAAATCACCAgggaaacaaaaacaaaaacaaatcaagaATAACAACG
TACCGCAGAATAAACGCGGGTTCAATGCGAACAAAACGCAGAAACAAAAT
AAACCAGAGAGGAATAAAACCGCGTTAAACCAACTGAACACGCAGAGTAA
ACGAGGTTTTAAGAAAAGACTTCAACCGAAATTAGGTGGTTCTAATCATT
CATTGACCATATCTTCAACTAAACAACGCAAGATTATGAAGCAATTCAAA
GGAGCCAATAAAGACGTTATGAATAAACTTTCAAGCGGTCGCTTAGCGGC
ATACGGTTTGGATAAAAGGAAGAAGGGAAAAGAAGATTGAcgttCTTTCT
ATGCAGAGAACTGGGACGACTGGGCTGGTTACCAAAGCAACGAACAACAA
GAACAACAACAAGAAGGTAAAAATGAAGAGCTAAGTGAGCAAAGTGAGGA
AGACGGCAGAGGCGACGAAATGGAAGAATATATGGAGGATGCTGAAGGTG
GCTACGAAGGGCATTGTGAGGACGATGATTTTAATATGGACGCTGATTAC
GTTGACACGCGGTCCGCCaagaaaaagatgaaagaaAAACGAGCTCTGCT
GTCAGGAAAGAACAAAAAGCAATCCAAATTCCTGGAAGCCATTCAAAAGA
AGAAACCGGTCTTCGATCCAAAGGACAAGAcatttgaagaatattttgac
GAGTATTACAAATTGGACTTTGAAGACATTGTCGGTGATATGCCGGTCAG
ATTCCAATACCGACAGGTGATGGCTAACAATTATGGACTCTCTACAAATG
AGATTTTAGATGCAGAAAATCGTGAGCTGAACGAATGGTGTTCTTTGAAG
CGTGTTATACGTTACAACACTGAAGCAGAAGAACAAAGTGAACgtcaaaa
atacaagaaaaaatcaCGGAACAAACAGAAGAAAGAAATCGTCTTCTCCT
CGCTGACGAAGAAAGCGCAGGAGAATGAAAACGAGGCCCCGGTTGGTGAT
ATTGGGTCCGGACAAGGGTCCAGCAAACAAGATGGAAGAAAAGCGAATAC
TCAtTCGAAGAATAAGCATACGTCAAAGAGCAATCAAAACCTCGACAAAA
CGAAATCACCAgggaaacaaaaacaaaaacaaatcaagaATAACAACGTA
CCGCAGAATAAACGCGGGTTCAATGCGAACAAAACGCAGAAACAAAATAA
ACCAGAGAGGAATAAAACCGCGTTAAACCAACTGAACACGCAGAGTAAAC
GAGGTTTTAAGAAAAGACTTCAACCGAAATTAGGTGGTTCTAATCATTCA
TTGACCATATCTTCAACTAAACAACGCAAGATTATGAAGCAATTCAAAGG
AGCCAATAAAGACGTTATGAATAAACTTTCAAGCGGTCGCTTAGCGGCAT
ACGGTTTGGATAAAAGGAAGAAGGGAAAAGAAGATTGAcgttCTTTCTAT
GCAGAGAACTGGGACGACTGGGCTGGTTACCAAAGCAACGAACAACAAGA
ACAACAACAAGAAGGTAAAAATGAAGAGCTAAGTGAGCAAAGTGAGGAAG
ACGGCAGAGGCGACGAAATGGAAGAATATATGGAGGATGCTGAAGGTGGC
TACGAAGGGCATTGTGAGGACGATGATTTTAATATGGACGCTGATTACGT
TGACACGCGGTCCGCCaagaaaaagatgaaagaaAAACGAGCTCTGCTGT
CAGGAAAGAACAAAAAGCAATCCAAATTCCTGGAAGCCATTCAAAAGAAG
AAACCGGTCTTCGATCCAAAGGACAAGAcatttgaagaatattttgacGA
GTATTACAAATTGGACTTTGAAGACATTGTCGGTGATATGCCGGTCAGAT
TCCAATACCGACAGGTGATGGCTAACAATTATGGACTCTCTACAAATGAG
ATTTTAGATGCAGAAAATCGTGAGCTGAACGAATGGTGTTCTTTGAAGCG
TGTTATACGTTACAACACTGAAGCAGAAGAACAAAGTGAACgtcaaaaat
acaagaaaaaatcaCGGAACAAACAGAAGAAAGAAATCGTCTTCTCCTCG
CTGACGAAGAAAGCGCAGGAGAATGAAAACGAGGCCCCGGTTGGTGATAT
TGGGTCCGGACAAGGGTCCAGCAAACAAGATGGAAGAAAAGCGAATACTC
AtTCGAAGAATAAGCATACGTCAAAGAGCAATCAAAACCTCGACAAAACG
AAATCACCAgggaaacaaaaacaaaaacaaatcaagaATAACAACGTACC
GCAGAATAAACGCGGGTTCAATGCGAACAAAACGCAGAAACAAAATAAAC
CAGAGAGGAATAAAACCGCGTTAAACCAACTGAACACGCAGAGTAAACGA
GGTTTTAAGAAAAGACTTCAACCGAAATTAGGTGGTTCTAATCATTCATT
GACCATATCTTCAACTAAACAACGCAAGATTATGAAGCAATTCAAAGGAG
CCAATAAAGACGTTATGAATAAACTTTCAAGCGGTCGCTTAGCGGCATAC
GGTTTGGATAAAAGGAAGAAGGGAAAAGAAGATTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_003855	XLOC_003855	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00006873-protein	TCONS_00006873-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000072	supercontig	sc0000072:238298..243482 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.70814	9.00375	4.16824	4.30818	36.2331	27.4613	22.2908	25.2994	15.6612	19.337	14.4978	12.5752	16.7831	17.9421	15.088	22.8493	19.7686	20.5591	4.07118	4.88767	14.0652	13.147	18.7562	17.2997	18.8701	19.9135	6.22845	6.38649	14.6306	18.465

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR024626	Kri1-like_C

Blast

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BLAST of TCONS_00006873 vs. Swiss-Prot (Human)
Match: KRI1 (Protein KRI1 homolog OS=Homo sapiens GN=KRI1 PE=1 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 4.134e-43
Identity = 83/161 (51.55%), Postives = 115/161 (71.43%), Query Frame = 3

Query:  168 EGHCEDDDFNMDADYVDTRSAKKKMKEKRALLSGKNKKQSKFLEAIQKKKPVFDPKDKTFEEYFDEYYKLDFEDIVGDMPVRFQYRQVMANNYGLSTNEILDAENRELNEWCSLKRVIRYNTEAEEQSERQXXXXXXXXXXXXEIVFSSLTKKAQENENEA 650
            E HCED +FNMDADY  ++  KKK   + A L+GK K++S F  A+ ++KPVF+P DKTFEEY DEYY+LD+EDI+ D+P RF+YR V+  ++GLST EIL A+++ELN WCSLK+   Y +E EE  +++ Y +K++N  KK  VF SL ++  E   EA
Sbjct:  444 ELHCEDPNFNMDADYDPSQPRKKK---REAPLTGKKKRKSPFAAAVGQEKPVFEPGDKTFEEYLDEYYRLDYEDIIDDLPCRFKYRTVVPCDFGLSTEEILAADDKELNRWCSLKKTCMYRSEQEELRDKRAYSQKAQNSWKKRQVFKSLCREEAETPAEA 601

The following BLAST results are available for this feature:

BLAST of TCONS_00006873 vs. Swiss-Prot (Human)

BLAST of TCONS_00006873 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KRI1	4.134e-43	51.55	Protein KRI1 homolog OS=Homo sapiens GN=KRI1 PE=1 ...	[more]

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TCONS_00006873 (transcript) - C. hemisphaerica