XLOC_003855 (gene) - C. hemisphaerica

Overview
NameXLOC_003855
Unique NameXLOC_003855
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000072:238298..243482+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003855 ID=XLOC_003855|Name=XLOC_003855|organism=Clytia hemisphaerica|type=gene|length=5185bp|location=Sequence derived from alignment at sc0000072:238298..243482+ (Clytia hemisphaerica)
ttcgttCTTTCTATGCAGAGAACTGGGACGACTGGGCTGGTTACCAAAGC AACGAACAACAAGAACAACAACAAGAAGGTAAAAATGAAGAGCTAAGTGA GCAAAGTAAGTGTGTTTAAGTGATACTTCATTTTAGCAAtatcaaaaaag gtaaaaaaacctcggtaggccatttttcatgtccTTTAAAGCATTCGGTT ATTGGACGCCACCCCTCCtgaaataattaaaattttgttaaatacagcct ttttagtggaaaaacactAGAAAAGGTGCCCtctttttggccaccaacgg acgctgTCTTGCCTTTCTTAAACATGGCCTGCTCGGgctattttttcgaa aattgccctcaaattcaaatacaattttTAACACTAAACATAAATAACTG TTATTAATTTTTACAATTATACTTCAGGTGAGGAAGACGGCAGAGGCGAC GAAATGGAAGAATATATGGAGGATGCTGAAGGTGGCTACGAAGGGCATTG TGAGGACGATGATTTTAATGTAAGTACTATCCTAAATAAGTTTAAACTTG TCAACTCGGTGTCTACTCTGTACCATACAGAGTGTATCTCTTGTATGACG TAGCGTAGTACACCTCTACGGCAATAGAATTTCTGTAGATGTCGTCTCTC TGTAAAGCCTGAATGTTCTACTTGACGCCAGAGtgcaataaattttgaaa tttccgtaGATGTCGGGTCTGTTTACAGACAAGTAAGAGTCAAGTAACAG TGTTACTCTCACTTGAAGTTattcgtggcttggatcacgagttTTGCGTT TGATGATGTGCGTTTTAACGTGAAGCTTAACTTTTTCTGAGTTTTCGGAC GACATATGGCCTTCTTAGAtgattgaattttcaaaaacaactcCTAGGAT CTTCGAAATTAATTACCGTATTCAACAGGCGACCAACAAATTCGCAGAAA TGACCAATCTTCTTCAAAAATTGCAATACCTCTTTGAAAACTCGTACTAT CTTCCTCAAAAGTTATATATGGGATTTGACTGAAACAATCGTTTAGTTTC AATCTCTGTCTCATTTACTCATTAGATGGACGCTGATTACGTTGACACGC GGTCCGCCaagaaaaagatgaaagaaAAACGAGCTCTGCTGTCAGGAAAG AACAAAAAGCAATCCAAATTCCTGGAAGCCATTCAAAAGAAGAAACCGGT CTTCGATCCAAGTATGACAAATGTTTTGAGATTCAACTCTCCTACTATAC CTCGATTGCATTAAACTTCgctaaattttcgcgagatctagttttcgttt tcgttttcgtttttgcatttttcgcgaaaataaaactgggtaatcgtttg aaattgctgacttgcgaaattaaatctacATGAAACTTTCAAGTTCAGAT TTTAGACTAAAGGTTTCTTGTAGATTTTCCATTTCTGACACGAATGGGCC AGTTTCAATTAATCAAATACTGAAGGAGAACGCaaattttttcgagttaa ggaaatttcttATGGAATATAGTTTGTAAGGCGTTGTCAATAACTGAGGG GACCattaaacttgttcgagttaaggaggcattcgagttatagaggttcc agTTAAAGAGGTTGGAGTTAAAGAGATACCACTGTACTGTATTATAACTT AACACAAATGCTTGTTGTTGTCAATTTCAGAGGACAAGAcatttgaagaa tattttgacGAGTATTACAAATTGGACTTTGAAGACATTGTCGGTGATAT GCCGGTCAGATTCCAATACCGACAGGTGATGGCTAACAATTATGGACTCT CTACAAATGAGGTACGAGCCTTTTTTAAACAACTGCCTTTCATGTACACA CCCATGTCTCATAGCCCCAGGGAAATTTTTCTCTCAGTGAGGAGAGAATT AGCTAACTTATATTACTTATAACTTGCTTGCTTacttattctcaacttca gttgagctagaatctgacaaggtctgtatgtatgtctgtatgtatgtctg cctgtatgtccgtccgaaaaatttggggcagcctggagacttcaaaaatt gttcgatttggctgaaattttgcacacttgttccttgggtgaatatctgg gggcgtttttttaatttttcaaaaatttgggatttttggggcctggggac gagttttttgccaaaacgaggctaaaacttggtattcacccaaggaacaa gtgtaccaaatttcagccaaaatgaaCAAAGTTATCATATTTGCTACGTA ATaccaaatatttgaaatgttataaTTGGGCTTTCGAATAACAAAATATC TGAAATTGAGCCGGCAGTGTGGTGCGCAGGTTCGACTATATTATTAGGGG TGTTTGATTAATCCGATTAGACTAGGTTTTAGTCGTACCTCGAGTTTTTT ACTATTATTAACACGACAGAGGAACCTACTTTACTCTCCGTACTTACTGT ATATTGATATttaattttccgattttctctGCTTGCAGATTTTAGATGCA GAAAATCGTGAGCTGAACGAATGGTGTTCTTTGAAGCGTGTTATACGTTA CAAGTAAGTCATTCAATCTACAATCTCTATCACTCGAACACGCAGGAGAA ACacaattttgttcgatttaaggaaAATCCGAGTTATGGAGTAGTCCTAT CTGAAGGGACCagcaaacttgttcgagttatagggTATCGAGTTGAATAG ACTCTACTGCAGAACTGTTATTCTTTGCGTGTCATCTAGTGTTTTTAGTG TTTCTACAGAATGAGAAAATTGTCTGATCTGAATAAAGCTGTTTTCATAT GTGGGTTAGTTAAAATCTTTACCATATTTTTCTCAGCTATTTTCCGGTTA TTTAGATATTTTGGATAATGTGTCTTTTTAGAAAAGTTTCTGACTGGTTT CTCAGATTTGTCAGACTACAAATAAGGCAGGGACGGCAGCAAAATCTTCA GAAGGTTTTTAGCTTCTAGTCTtaaaatacagttgacactttttaatttg ATCTGCAAGGAACCAACGATCTTCGATTCGATTTACAGAGAGTATTTACA CGACTTTTCATCTGGTCCCCAGCatcagttcgaattacagataAATTCAA ACAATAAAGGTTCGAAGTAGAGAGAAAGTTGATTGCAAGACAATCCTTAA AAATCTTATTTCGtgatacagttgactctctctaattcgatgttcaACGG ACCAAAAACTtacttcgaattagagaaagactTGAATTACAGAGATTGAT TCACACCACTTCCCAGGTGAGGGGACCANCCAAAAACTtacttcgaatta gagaaagactTGAATTACAGAGATTGATTCACACCACTCCCTAggtgagg ggaccaatattttactagttcgaattacagaaagattcgaataatagagg ttcaaattcatgatattcacgacgtaatgttttctacggaaagaccccgg ttttagACAGTGGTGGCAAaattaaactagacaaaagttgtataaaattt gccattactggcaaaaaccggggtctttccgtaaaaaaaacattacgtca ttaatATCATTAATAAAGAGAGAGATGAATGGAAGACAATCCTTAAAATT TGAACCCGCGATATTCTTCTATTTGAAGCACTGAAGCAGAAGAACAAAGT GAACgtcaaaaatacaagaaaaaatcaCGGAACAAACAGAAGAAAGAAAT CGTCTTCTCCTCGCTGACGAAGAAAGCGCAGGAGAATGAAAACGAGGCCC CGGTTGGTGATATTGGGTCCGGACAAGGGTCCAGCAAACAAGATGGAAGA AAAGCGAATACTCAGTAAGTTgtcttaatattttttaatgtgaCCTGTTC TTTTAAATGCTGCCATGTAGAAACATTTTAGTGTAGCTATAGTAATTCCC TTGAGAGTAAGGTAGCCCGAGGTTCACTTaaatctttttataaatttgaC GGTATGAGTAAACTTTTATTCGAAAATAAGGGGTTGCTAttcatgtttgt ttctcattgtttttaattatatttttcaacaaagTTCAGCAAGAAGttct ttaggcgtacaaactttcgcgagcagaaactttcgcgaggtcaaaaaatc gcgaaatttgcgACATTTACTTTGGCGAATTTGAGGAACTAAtctttttc gcgagcataaactttcgcgaatcgttagataaaaatgagaattttcgaat aaaatttgccttaaaagtgaaaattattCCTTTAAATCCGCTAAAGACGG TTGCTCTTCAACTCTAAAAAGGTATTACAGGATAATAGTATgcagaaaat ttgatatttattacgatttcgatttccaatttttttgagaatttttcgcg agcataaacctTCGCGAATTatcctgttaagaattttcaaagacatttac ttccgcgaaaaaggccaaaattcgcgaaaatcgaagccttatgttctgat atagtttggttatttatttatttatttatttattgtatatttttagtTCG AAGAATAAGCATACGTCAAAGAGCAATCAAAACCTCGACAAAACGAAATC ACCAgggaaacaaaaacaaaaacaaatcaagaATAACAACGTACCGCAGA ATAAACGCGGGTTCAATGCGAACAAAACGCAGAAACAAAATAAACCAGAG AGGAATAAAACCGCGTTAAACCAACTGAACACGCAGAGTAAACGAGGTTT TAAGAAAAGACTTCAACCGAAATTAGGTGGTTCTAATCATTCATTGACCA TATCTTCAACTAAACAACGCAAGATTATGAAGCAATTCAAAGGAGCCAAT AAAGACGTTATGAATAAACTTTCAAGCGGTCGCTTAGCGGCATACGGTTT GGATAAAAGGAAGAAGGGAAAAGAAGATTGAGCTTAGGTAACGTCTCATC CTCTAAATGCTctttttgttttaacttttatGAACTTTTATATAAATTTG TATTAGAAACTAATGCTTTTTGGAATGCAAAGTTACATTTAATTCAATGT AATTAATATACGGAAAGAACGATGAGAAAGAATTTCGCCCCACATTTTCG AAACCAAAAAAGACCCTGGACCAACCACCGACGGGGACGAGCCGTTAGAT CTTGAAAAATGTACACAGCTAAACGAAATACTGAACCTGAAAGACCATAT TACATATTAGTACCTGACTCgctgatgaaattttg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006873TCONS_00006873Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006873-proteinTCONS_00006873-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072supercontigsc0000072:238298..243482 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.71 9 4.17 4.31 36.23 27.46 22.29 25.3 15.66 19.34 14.5 12.58 16.78 17.94 15.09 22.85 19.77 20.56 4.07 4.89 14.07 13.15 18.76 17.3 18.87 19.91 6.23 6.39 14.63 18.46