TCONS_00046951-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046951-protein
Unique NameTCONS_00046951-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length392

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046951-protein ID=TCONS_00046951-protein|Name=TCONS_00046951-protein|organism=Clytia hemisphaerica|type=polypeptide|length=392bp
MIRLVGPGCFMGKIDIKHAFRLCPVHPDDWPLLGYHWQGRYYFDLCLPFG
SRSFPCIFNMFADALQWILVHKCLLSALSHYLDDFILCAVTSVETQHKMN
VTQALFKDVGVPVALDKLEGPSQVMSYLGIEIDTVSSLIRLPDDKLSALK
TMVSSWRSKKKCTKRELLSLIGSLSFACKVIRPGRIFMRRLIDLSTSVAR
LNHHIDISCDVRLDLDMWAEFLDSWNGSFIPTPISLKKPFEIFTDASFLG
FGCFFQGLWISQAWPFDVSNFTHISFLEIFAAFVSLTTWTEFFRDCRIVV
FSDNEATVSVWSSSSSKDKQMMAIIREIFFITAKKNILLSVRHIPGSNNV
FADLLSRLQVNAFKLVCPESCPYPSIPPVSSMDLLAKILLGS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029953XLOC_029953Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046951TCONS_00046951Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 38..132
e-value: 1.2E-8
score: 34.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..132
score: 12.647
NoneNo IPR availableGENE3D3.30.70.270coord: 4..132
e-value: 1.6E-10
score: 40.4
NoneNo IPR availableCDDcd09275RNase_HI_RT_DIRS1coord: 241..359
e-value: 4.24521E-28
score: 105.828
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 7..349
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 230..362
e-value: 6.7E-7
score: 28.4

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046951-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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