TCONS_00046951 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046951
Unique NameTCONS_00046951
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4478

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046951 ID=TCONS_00046951|Name=TCONS_00046951|organism=Clytia hemisphaerica|type=transcript|length=4478bp
gtttgtaaattgtctaaatattttatcatgattagtataattacgcatga
attaacatattttatgcacagatcgcgaatcgtgcatcgtaaatcgttag
atcgtgcatcttaaattacaccaaccctttAGTTACCCCCTGTTGTGGAT
GACATGGATTTTCCGTAACAATTTACCTGTAAAAAACTTCAGGATTTCCG
TTACATTCAAGTATATGGTTAATATGGTTACTGTATAGCATAATTCTTTA
CCAAataaatttatcattttcagtgtcattctgaaacaaaaatttgatcc
CAGGTTTCGTGACCTCGATCGATTATTAAGGGGGATTCTGAGAACTCTAT
ATAGAGGGAGATTGATtatatggggggggggttgattataccagacccga
tcaatcgaacttgtcgaaccaatcgaacaatcaaactaatcaaactccat
cgaacgactaaattttgattaaaaaaattaatcgaactccaagatttttt
acaagattgtgagtgttcgattaagttccaTCATTAACAACACCAGCTTC
CTCAGCAGTTGGCGATGGAACAACCGACATTTTGGCAACTCTGAATTCCT
TAATCGACAGCCGACTTAGTGCGTTGTTGCCAACAGCCGCCATCCCTTCT
GCTTCAAGTCCTGTCCTTTAAAACCAGGCCAATAACTTTATTCTTCCACa
acaattccaaacaacaacaacgtCCGTCACGCCCGGTACCGTAAACGCAA
CCGCCTCTAACGCCCTCACGGGAGCAATCAACAACATCAATAATGGTAAC
CCAGCTACGAGTACGGGCGATAACGTTTTGCTTTCGTTGCCACTTCTTCA
ACAACAACTAGGACAAGTTTtgcaacagcaacaacaacctCAAACTCAAC
ATCAATTGTGTACGAACGAACTGCCTGCTATTCCAGCCAAGATTATCAAA
CAAATAAAGAATGGTGAGTTCATTGACTTTGACCTCTTGCTGCCTAGCAA
TATTGGTAGGCCTGCCAATACTTCTGTTGCATTTGCCTTCGATGGAGATG
GAAATATATCTCTCCAACAGCGTAGTGACTCTAGTctgtttacaaaaaaa
gctaaggTTATTGACCTAAATTCATGGCTGATGGTGTGGTCCAGGTTCAT
TCAAGCCACCTTGGTTTTTCGCCCTTTTCTCGTCAACCAGTTGATTGCAT
ACCAAGTGTATATTGCACAACTAGCCAACGATTACTTTTTTAATGGGTGG
TATGTATATGACAAAGCCTTCAGAACTTACATCGCAAACAACCCCACCGC
TAGGTGGGATATTACTAGTACAACATTATTCAACATGCACCTCCAGGGTC
AAAGGGAGCCTAGCAAATGTTACCTTTGCCAAAGCAAGGACCATCTTGCC
CCTCGATGCACCGCGTCTTCTGCTTCCCTTTCTGGTCGGTCGTCCTTGAA
TCTTGGCTCAGCTCCTCAACCTGCACACCACACCCCTCGTTTGCCTTCCC
AGCCTGTCCCTCGCCCTCGGCCCCCTTCTTTTCCTCGTGCACAGTACTTC
CAACCCTACCCTTCCCTCCGCCAGCCCTTTCCTAACCCCCAGCAAGCTTC
CTCTGCTGCCAATACCACGAAGCAATGCCATCTTTTCAACACAATCTTTT
CAACACAAGCCTCCCTTGTCGTCCCGGCTGCAGGTACGTCCACACCTGCC
TCATCTGCAGCGACAACCACCCAGCCCTCCAGTGCCCCTACCGTTAGCGA
TTTTCAAACCCTACTTGACTTTCCCTCCTTTTCCTTTCTCCCCTCTCCCT
CTAAGCCAGCCACCTCTGTGAAACCTGCAGTGCTCCATGAATTGATCTCT
GGGTATGACCCTGAAATAAGAGATTTTTTAGTGTCTGGGTTTTTCTATGG
ATTCCACATTGGAATTCAAGGGCCCTCTCCCTCAGGACCTGAACGCAACA
ACCTTTCGGCCGATTCTAACGGTCAGGCTGTGTCTACAGCCATCTTGAAA
GAATTGAAGCGGGGACATACCGCAGGCCCCTTCGACTCCCACCCTCTACC
TTCCTTCTTCTGTTCCCCCCTTGGTGCTGCCCCAAAGAAAGATGGAACCC
AACGTGTCATCCTGGACTTATCCTTCCCCCTGGCTCTTCTGTTAATGATG
GAATCCCTATCGATCTAACTCATGTGGAATACACATCCTTTGATGAAACC
CTCAACATGATCCGCCTAGTGGGCCCAGGTTGTTTTATGGGAAAAATCGA
CATTAAGCATGCCTTTCGCCTATGCCCCGTTCACCCTGATGACTGGCCCC
TTCTAGGTTACCATTGGCAAGGTAGGTATTATTTTGATCTTTGTCTCCCT
TTTGGCAGCCGATCCTTCCCCTGTATTTTCAACATGTTTGCTGATGCTCT
GCAGTGGATTCTTGTACATAAATGTCTTCTATCTGCTCTCTCCCACTATC
TTGACGACTTCATTCTGTGTGCGGTTACTTCAGTCGAAACTCAGCATAAG
ATGAATGTTACACAGGCTCTCTTCAAGGACGTTGGTGTCCCCGTCGCTTT
GGACAAATTGGAAGGCCCAAGTCAGGTTATGTCTTATCTTGGTATTGAAA
TTGACACTGTATCTTCTCTCATTCGTCTTCCTGATGATAAGTTGTCTGCG
CTTAAAACAATGGTATCCTCTTGGCGCTCAAAGAAGAAATGTACAAAACG
CGAGCTTCTTTCTTTGATTGGGTCTTTGTCGTTTGCCTGCAAAGTGATTC
GTCCAGGTCGTATCTTTATGCGTCGCCTAATCGATCTTTCTACTTCTGTG
GCTCGTCTCAATCACCATATTGACATTTCCTGTGATGTCCGTCTTGATCT
TGACATGTGGGCAGAATTCCTCGATTCCTGGAATGGGTCTTTTATCCCTA
CCCCCATCTCCCTTAAGAAGCCTTTTGAGATTTTCACGGATGCTTCCTTT
TTGGGTTTTGGCTGCTTTTTCCAGGGTTTATGGATTTCCCAAGCCTGGCC
TTtcgatgtttccaattttacCCACATATCCTTCCTTGAGATCTTCGCTG
CTTTTGTATCTTTAACAACATGGACTGAGTTTTTTAGGGATTGTAGGATT
GTTGTGTTTTCTGACAATGAGGCTACAGTTTCGGTCTGGTCGTCTTCTTC
TTCAAAAGACAAGCAAATGATGGCAATTATTAGGGAGATCTTTTTTATTA
CTGCTAAGAAGAATATCCTCCTTTCCGTCCGTCACATCCCGGGTTCTAAT
AATGTTTTTGCTGATCTCTTGTCCCGTTTACAGGTCAACGCATTCAAATT
AGTCTGTCCCGAATCTTGTCCGTACCCATCAATTCCACCAGTCTCTTCAA
TGGATCTCTTGGCAAAGATCTTGTTGGGCTCTTAAAAGACTCGTTGGCCC
CTTCCACCCAATCCACCTATATGTGCGGCACCCGCTCCTACCTCAATTTT
TGCGAGACATCTGGTTTGACCCCATTTCCTGTTTCAGAGTCTTCGTTGTG
TTTCTTTGCTGTCTTCTCTTTTAATCGTGGTATAGCTTGCAAAACCATTA
AAGTATACATTACTGGAGTACTACACCAAAACACCATGCTGGGTTCCAAT
GCATCCCTACCCCTTATGCCCGTCCTTCACAAACTCGTCCGAGGTATCCG
ACGTCGCCAAGGCAACTCCTTAACCCGCAAACAAAGAAAACCTATCACCA
TGTCCCACCTGCGAATCATTTCCAACTTTTTACTGTGCAGTGGTCACCCT
ACACACGATAAATACATGCTCCTGACTGCTTGCCTTACAgccttttttgg
ttttttgagaGTTTCCGAATTTACTTGCCCATCACTCAGTTCGTATGACC
CAACAGCACACCTCCAAAGATCTGATATTACGTTTAACCCGGATTTTTCA
ATTATGTCCGTCCGAATCAAGGCAAGTAAGACTGATCCTTTTCGACTTGG
TGTGACCATCCGAATTACCGCCACCTTCGACCAAATTTGTTCTGTGGGTG
CAATGAGGAACTATCTAGCCATACGTGATTCATCAATTGGCCCGctcttt
aaatttttagatgGCAAATTTCTAACGCGCAGGAAAGTTCATGATCTTCT
CGGAAAGTCCCTCCCGCTTGAACACAATTTGAATACCCATAGTTTTCGCA
TCGGTGGTGCTTCGNGctctttaaatttttagatgGCAAATTTCTAACGC
GCAGGAAAGTTCATGATCTTCTCGGAAAGTCCCTCCCGCTCGAACACAAT
TTGAATACCCATAGTTTTCGCATTGGTGGTGCTTCAGCTGCCCTCTCAGC
AGGTGTATCTGACTCAATGATACGCATCATGGGTAGATGGTCTAGTGATT
GCTATCTTAGGTATCTCAGAATCTCTGACCGAGATATTTCGAAATTTAAC
ACTAACATGGCTAAGGTAACTTTTGTTTCGTCCACCTGGGACCCAAATAA
TTGGTGatttatataaattttatctCTA
Run BLAST on NCBI

protein sequence of TCONS_00046951-protein

>TCONS_00046951-protein ID=TCONS_00046951-protein|Name=TCONS_00046951-protein|organism=Clytia hemisphaerica|type=polypeptide|length=392bp
MIRLVGPGCFMGKIDIKHAFRLCPVHPDDWPLLGYHWQGRYYFDLCLPFG
SRSFPCIFNMFADALQWILVHKCLLSALSHYLDDFILCAVTSVETQHKMN
VTQALFKDVGVPVALDKLEGPSQVMSYLGIEIDTVSSLIRLPDDKLSALK
TMVSSWRSKKKCTKRELLSLIGSLSFACKVIRPGRIFMRRLIDLSTSVAR
LNHHIDISCDVRLDLDMWAEFLDSWNGSFIPTPISLKKPFEIFTDASFLG
FGCFFQGLWISQAWPFDVSNFTHISFLEIFAAFVSLTTWTEFFRDCRIVV
FSDNEATVSVWSSSSSKDKQMMAIIREIFFITAKKNILLSVRHIPGSNNV
FADLLSRLQVNAFKLVCPESCPYPSIPPVSSMDLLAKILLGS
Run BLAST on NCBI

transcript from alignment at scaffold_118:202617..207094

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046951 ID=TCONS_00046951|Name=TCONS_00046951|organism=Clytia hemisphaerica|type=transcript|length=4478bp|location=Sequence derived from alignment at scaffold_118:202617..207094 (Clytia hemisphaerica)
TAGagataaaatttatataaatCACCAATTATTTGGGTCCCAGGTGGACG AAACAAAAGTTACCTTAGCCATGTTAGTGTTAAATTTCGAAATATCTCGG TCAGAGATTCTGAGATACCTAAGATAGCAATCACTAGACCATCTACCCAT GATGCGTATCATTGAGTCAGATACACCTGCTGAGAGGGCAGCTGAAGCAC CACCAATGCGAAAACTATGGGTATTCAAATTGTGTTCGAGCGGGAGGGAC TTTCCGAGAAGATCATGAACTTTCCTGCGCGTTAGAAATTTGCcatctaa aaatttaaagagCNCGAAGCACCACCGATGCGAAAACTATGGGTATTCAA ATTGTGTTCAAGCGGGAGGGACTTTCCGAGAAGATCATGAACTTTCCTGC GCGTTAGAAATTTGCcatctaaaaatttaaagagCGGGCCAATTGATGAA TCACGTATGGCTAGATAGTTCCTCATTGCACCCACAGAACAAATTTGGTC GAAGGTGGCGGTAATTCGGATGGTCACACCAAGTCGAAAAGGATCAGTCT TACTTGCCTTGATTCGGACGGACATAATTGAAAAATCCGGGTTAAACGTA ATATCAGATCTTTGGAGGTGTGCTGTTGGGTCATACGAACTGAGTGATGG GCAAGTAAATTCGGAAACtctcaaaaaaccaaaaaaggcTGTAAGGCAAG CAGTCAGGAGCATGTATTTATCGTGTGTAGGGTGACCACTGCACAGTAAA AAGTTGGAAATGATTCGCAGGTGGGACATGGTGATAGGTTTTCTTTGTTT GCGGGTTAAGGAGTTGCCTTGGCGACGTCGGATACCTCGGACGAGTTTGT GAAGGACGGGCATAAGGGGTAGGGATGCATTGGAACCCAGCATGGTGTTT TGGTGTAGTACTCCAGTAATGTATACTTTAATGGTTTTGCAAGCTATACC ACGATTAAAAGAGAAGACAGCAAAGAAACACAACGAAGACTCTGAAACAG GAAATGGGGTCAAACCAGATGTCTCGCAAAAATTGAGGTAGGAGCGGGTG CCGCACATATAGGTGGATTGGGTGGAAGGGGCCAACGAGTCTTTTAAGAG CCCAACAAGATCTTTGCCAAGAGATCCATTGAAGAGACTGGTGGAATTGA TGGGTACGGACAAGATTCGGGACAGACTAATTTGAATGCGTTGACCTGTA AACGGGACAAGAGATCAGCAAAAACATTATTAGAACCCGGGATGTGACGG ACGGAAAGGAGGATATTCTTCTTAGCAGTAATAAAAAAGATCTCCCTAAT AATTGCCATCATTTGCTTGTCTTTTGAAGAAGAAGACGACCAGACCGAAA CTGTAGCCTCATTGTCAGAAAACACAACAATCCTACAATCCCTAAAAAAC TCAGTCCATGTTGTTAAAGATACAAAAGCAGCGAAGATCTCAAGGAAGGA TATGTGGgtaaaattggaaacatcgaAAGGCCAGGCTTGGGAAATCCATA AACCCTGGAAAAAGCAGCCAAAACCCAAAAAGGAAGCATCCGTGAAAATC TCAAAAGGCTTCTTAAGGGAGATGGGGGTAGGGATAAAAGACCCATTCCA GGAATCGAGGAATTCTGCCCACATGTCAAGATCAAGACGGACATCACAGG AAATGTCAATATGGTGATTGAGACGAGCCACAGAAGTAGAAAGATCGATT AGGCGACGCATAAAGATACGACCTGGACGAATCACTTTGCAGGCAAACGA CAAAGACCCAATCAAAGAAAGAAGCTCGCGTTTTGTACATTTCTTCTTTG AGCGCCAAGAGGATACCATTGTTTTAAGCGCAGACAACTTATCATCAGGA AGACGAATGAGAGAAGATACAGTGTCAATTTCAATACCAAGATAAGACAT AACCTGACTTGGGCCTTCCAATTTGTCCAAAGCGACGGGGACACCAACGT CCTTGAAGAGAGCCTGTGTAACATTCATCTTATGCTGAGTTTCGACTGAA GTAACCGCACACAGAATGAAGTCGTCAAGATAGTGGGAGAGAGCAGATAG AAGACATTTATGTACAAGAATCCACTGCAGAGCATCAGCAAACATGTTGA AAATACAGGGGAAGGATCGGCTGCCAAAAGGGAGACAAAGATCAAAATAA TACCTACCTTGCCAATGGTAACCTAGAAGGGGCCAGTCATCAGGGTGAAC GGGGCATAGGCGAAAGGCATGCTTAATGTCGATTTTTCCCATAAAACAAC CTGGGCCCACTAGGCGGATCATGTTGAGGGTTTCATCAAAGGATGTGTAT TCCACATGAGTTAGATCGATAGGGATTCCATCATTAACAGAAGAGCCAGG GGGAAGGATAAGTCCAGGATGACACGTTGGGTTCCATCTTTCTTTGGGGC AGCACCAAGGGGGGAACAGAAGAAGGAAGGTAGAGGGTGGGAGTCGAAGG GGCCTGCGGTATGTCCCCGCTTCAATTCTTTCAAGATGGCTGTAGACACA GCCTGACCGTTAGAATCGGCCGAAAGGTTGTTGCGTTCAGGTCCTGAGGG AGAGGGCCCTTGAATTCCAATGTGGAATCCATAGAAAAACCCAGACACTA AAAAATCTCTTATTTCAGGGTCATACCCAGAGATCAATTCATGGAGCACT GCAGGTTTCACAGAGGTGGCTGGCTTAGAGGGAGAGGGGAGAAAGGAAAA GGAGGGAAAGTCAAGTAGGGTTTGAAAATCGCTAACGGTAGGGGCACTGG AGGGCTGGGTGGTTGTCGCTGCAGATGAGGCAGGTGTGGACGTACCTGCA GCCGGGACGACAAGGGAGGCTTGTGTTGAAAAGATTGTGTTGAAAAGATG GCATTGCTTCGTGGTATTGGCAGCAGAGGAAGCTTGCTGGGGGTTAGGAA AGGGCTGGCGGAGGGAAGGGTAGGGTTGGAAGTACTGTGCACGAGGAAAA GAAGGGGGCCGAGGGCGAGGGACAGGCTGGGAAGGCAAACGAGGGGTGTG GTGTGCAGGTTGAGGAGCTGAGCCAAGATTCAAGGACGACCGACCAGAAA GGGAAGCAGAAGACGCGGTGCATCGAGGGGCAAGATGGTCCTTGCTTTGG CAAAGGTAACATTTGCTAGGCTCCCTTTGACCCTGGAGGTGCATGTTGAA TAATGTTGTACTAGTAATATCCCACCTAGCGGTGGGGTTGTTTGCGATGT AAGTTCTGAAGGCTTTGTCATATACATACCACCCATTAAAAAAGTAATCG TTGGCTAGTTGTGCAATATACACTTGGTATGCAATCAACTGGTTGACGAG AAAAGGGCGAAAAACCAAGGTGGCTTGAATGAACCTGGACCACACCATCA GCCATGAATTTAGGTCAATAAccttagctttttttgtaaacagACTAGAG TCACTACGCTGTTGGAGAGATATATTTCCATCTCCATCGAAGGCAAATGC AACAGAAGTATTGGCAGGCCTACCAATATTGCTAGGCAGCAAGAGGTCAA AGTCAATGAACTCACCATTCTTTATTTGTTTGATAATCTTGGCTGGAATA GCAGGCAGTTCGTTCGTACACAATTGATGTTGAGTTTGaggttgttgttg ctgttgcaAAACTTGTCCTAGTTGTTGTTGAAGAAGTGGCAACGAAAGCA AAACGTTATCGCCCGTACTCGTAGCTGGGTTACCATTATTGATGTTGTTG ATTGCTCCCGTGAGGGCGTTAGAGGCGGTTGCGTTTACGGTACCGGGCGT GACGGacgttgttgttgtttggaattgttGTGGAAGAATAAAGTTATTGG CCTGGTTTTAAAGGACAGGACTTGAAGCAGAAGGGATGGCGGCTGTTGGC AACAACGCACTAAGTCGGCTGTCGATTAAGGAATTCAGAGTTGCCAAAAT GTCGGTTGTTCCATCGCCAACTGCTGAGGAAGCTGGTGTTGTTAATGAtg gaacttaatcgaacactcacaatcttgtaaaaaatcttggagttcgatta atttttttaatcaaaatttagtcgttcgatggagtttgattagtttgatt gttcgattggttcgacaagttcgattgatcgggtctggtataatcaaccc cccccccatataATCAATCTCCCTCTATATAGAGTTCTCAGAATCCCCCT TAATAATCGATCGAGGTCACGAAACCTGggatcaaatttttgtttcagaa tgacactgaaaatgataaatttatTTGGTAAAGAATTATGCTATACAGTA ACCATATTAACCATATACTTGAATGTAACGGAAATCCTGAAGTTTTTTAC AGGTAAATTGTTACGGAAAATCCATGTCATCCACAACAGGGGGTAACTaa agggttggtgtaatttaagatgcacgatctaacgatttacgatgcacgat tcgcgatctgtgcataaaatatgttaattcatgcgtaattatactaatca tgataaaatatttagacaatttacaaac

Coding sequence (CDS) from alignment at scaffold_118:202617..207094

>TCONS_00046951 ID=TCONS_00046951|Name=TCONS_00046951|organism=Clytia hemisphaerica|type=CDS|length=1179bp|location=Sequence derived from alignment at scaffold_118:202617..207094 (Clytia hemisphaerica)
TTAAGAGCCCAACAAGATCTTTGCCAAGAGATCCATTGAAGAGACTGGTG
GAATTGATGGGTACGGACAAGATTCGGGACAGACTAATTTGAATGCGTTG
ACCTGTAAACGGGACAAGAGATCAGCAAAAACATTATTAGAACCCGGGAT
GTGACGGACGGAAAGGAGGATATTCTTCTTAGCAGTAATAAAAAAGATCT
CCCTAATAATTGCCATCATTTGCTTGTCTTTTGAAGAAGAAGACGACCAG
ACCGAAACTGTAGCCTCATTGTCAGAAAACACAACAATCCTACAATCCCT
AAAAAACTCAGTCCATGTTGTTAAAGATACAAAAGCAGCGAAGATCTCAA
GGAAGGATATGTGGgtaaaattggaaacatcgaAAGGCCAGGCTTGGGAA
ATCCATAAACCCTGGAAAAAGCAGCCAAAACCCAAAAAGGAAGCATCCGT
GAAAATCTCAAAAGGCTTCTTAAGGGAGATGGGGGTAGGGATAAAAGACC
CATTCCAGGAATCGAGGAATTCTGCCCACATGTCAAGATCAAGACGGACA
TCACAGGAAATGTCAATATGGTGATTGAGACGAGCCACAGAAGTAGAAAG
ATCGATTAGGCGACGCATAAAGATACGACCTGGACGAATCACTTTGCAGG
CAAACGACAAAGACCCAATCAAAGAAAGAAGCTCGCGTTTTGTACATTTC
TTCTTTGAGCGCCAAGAGGATACCATTGTTTTAAGCGCAGACAACTTATC
ATCAGGAAGACGAATGAGAGAAGATACAGTGTCAATTTCAATACCAAGAT
AAGACATAACCTGACTTGGGCCTTCCAATTTGTCCAAAGCGACGGGGACA
CCAACGTCCTTGAAGAGAGCCTGTGTAACATTCATCTTATGCTGAGTTTC
GACTGAAGTAACCGCACACAGAATGAAGTCGTCAAGATAGTGGGAGAGAG
CAGATAGAAGACATTTATGTACAAGAATCCACTGCAGAGCATCAGCAAAC
ATGTTGAAAATACAGGGGAAGGATCGGCTGCCAAAAGGGAGACAAAGATC
AAAATAATACCTACCTTGCCAATGGTAACCTAGAAGGGGCCAGTCATCAG
GGTGAACGGGGCATAGGCGAAAGGCATGCTTAATGTCGATTTTTCCCATA
AAACAACCTGGGCCCACTAGGCGGATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029953XLOC_029953Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046951-proteinTCONS_00046951-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046951-exon-scaffold_118-1491911889:202617..207094TCONS_00046951-exon-scaffold_118-1491911889:202617..207094Clytia hemisphaericaexon
TCONS_00046951-exon-scaffold_118-1510915933:202617..207094TCONS_00046951-exon-scaffold_118-1510915933:202617..207094Clytia hemisphaericaexon
TCONS_00046951-exon-scaffold_118-1575043694:202617..207094TCONS_00046951-exon-scaffold_118-1575043694:202617..207094Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_118supercontigscaffold_118:202617..207094 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.302071 0.436252 0.644952 0.522646 0.905316 0.61844 0.519378 0.674201 0.457026 0.472501 0.415488 0.531796 0.476477 0.566315 0.248904 0.456731 0.273116 0.384997 0.690185 0.473648 0.594352 0.726703 0.20421 0.330643 0.497588 0.828134 0.646217 0.432056 0.782065 0.642498
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046951 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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