TCONS_00046599-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046599-protein
Unique NameTCONS_00046599-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length265

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046599-protein ID=TCONS_00046599-protein|Name=TCONS_00046599-protein|organism=Clytia hemisphaerica|type=polypeptide|length=265bp
VTNTYKREILSNHYIIIKITYKQDTHLLYYKTQFIMRKKSFREEFVKVAF
MGPGASGKSCIVHRLVGKKFSEEYEPTVFDFYDYESKVDNTCRLSLQISD
TAGAFSFPAMDRLTIQKSDVVVVVFDLTSMGSLKQAMKLAKEIRGDNPKK
AVLVIGNKSDLALRVAAKKELENTITCNLQMGYCELSAKYDXKKELENTI
TCNLQMGYCELSAKYDDVSADLIPRIAEEFAISKGPYDVKRSRKPLSAKF
KRKLSKSTENLLDLF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029743XLOC_029743Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046599TCONS_00046599Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 87..109
score: 31.08
coord: 148..161
score: 38.85
coord: 208..230
score: 22.7
coord: 46..67
score: 31.31
coord: 69..85
score: 28.0
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 48..206
e-value: 7.1E-6
score: -42.5
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 47..229
e-value: 6.2E-11
score: 38.4
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 46..210
e-value: 4.8E-6
score: -34.2
NoneNo IPR availableGENE3D3.40.50.300coord: 112..230
e-value: 2.0E-12
score: 46.4
NoneNo IPR availableGENE3D3.30.70.1390coord: 44..111
e-value: 1.3E-14
score: 53.5
NoneNo IPR availablePROSITEPS51419RABcoord: 38..233
score: 12.03
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 46..171
e-value: 2.6E-17
score: 61.0
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 47..192
e-value: 2.2E-28
score: 98.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 45..192

Blast
[Close]
BLAST of TCONS_00046599-protein vs. Swiss-Prot (Human)
Match: DIRA2 (GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIRAS2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.846e-19
Identity = 50/148 (33.78%), Postives = 76/148 (51.35%), Query Frame = 0 
Query:   47 KVAFMGPGASGKSCIVHRLVGKKFSEEYEPTVFDFYDYESKVDNTCRLSLQISDTAGAFSFPAMDRLTIQKSDVVVVVFDLTSMGSLKQAMKLAK---EIRGDNPKKAVLVIGNKSDLALRVAAKKELENTITCNLQMGYCELSAKYD 191
            +VA  G G  GKS +V R V   F E Y PTV D Y      D +   +LQI+DT G+  FPAM RL+I K    ++V+ +TS  SL++   + +   EI+GD     ++++GNK D +     +      +    +  + E SAK +
Sbjct:    9 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSI-CTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETSAKLN 155
The following BLAST results are available for this feature:
BLAST of TCONS_00046599-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIRA24.846e-1933.78GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIR... [more]
back to top