TCONS_00043973-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043973-protein
Unique NameTCONS_00043973-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length139

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043973-protein ID=TCONS_00043973-protein|Name=TCONS_00043973-protein|organism=Clytia hemisphaerica|type=polypeptide|length=139bp
MSIINYNGDHQDEIIPYVSNGAYNDIDMLLIGDYSLSEDQSKTQFAMWSI
LAAPLFMSADLSSMKDWQKDILLNTEVIAVNQDPMGKMGRRFYKQNNQQN
WVRDLADGGMAVAIMSTREDNPVFMSVDFSQVFLISRTT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027634XLOC_027634Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043973TCONS_00043973Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002241Glyco_hydro_27
IPR013785Aldolase_TIM
IPR017853Glycoside_hydrolase_SF
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002241Glycoside hydrolase, family 27PRINTSPR00740GLHYDRLASE27coord: 39..60
score: 42.05
coord: 18..37
score: 38.5
IPR002241Glycoside hydrolase, family 27PFAMPF16499Melibiase_2coord: 2..83
e-value: 4.9E-28
score: 98.0
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 2..85
e-value: 1.8E-22
score: 79.9
NoneNo IPR availablePFAMPF17450Melibiase_2_Ccoord: 86..132
e-value: 3.1E-7
score: 30.4
NoneNo IPR availableGENE3D2.60.40.1180coord: 86..139
e-value: 3.4E-8
score: 33.1
NoneNo IPR availableSUPERFAMILY51011Glycosyl hydrolase domaincoord: 85..136
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 10..84

Blast
[Close]
BLAST of TCONS_00043973-protein vs. Swiss-Prot (Human)
Match: NAGAB (Alpha-N-acetylgalactosaminidase OS=Homo sapiens GN=NAGA PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 3.234e-28
Identity = 53/123 (43.09%), Postives = 80/123 (65.04%), Query Frame = 0 
Query:    1 MSIINYNGDHQDEIIPYVSNGAYNDIDMLLIGDYSLSEDQSKTQFAMWSILAAPLFMSADLSSMKDWQKDILLNTEVIAVNQDPMGKMGRRFYKQNNQ-QNWVRDLADGGMAVAIMSTREDNP 122
            +SI+N+  +HQD + P    G +ND DMLLIG++ LS +QS+ Q A+W++LAAPL MS DL ++     DIL N  +I +NQDP+G  GRR +K+ +  + ++R L++   A+   S R D P
Sbjct:  226 LSILNWFVEHQDILQPVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNPLMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMP 348
The following BLAST results are available for this feature:
BLAST of TCONS_00043973-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NAGAB3.234e-2843.09Alpha-N-acetylgalactosaminidase OS=Homo sapiens GN... [more]
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