TCONS_00043882-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00043882-protein
Unique Name	TCONS_00043882-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	389

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00043882-protein ID=TCONS_00043882-protein|Name=TCONS_00043882-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
QVYWKGNTVAVLSFDKHQNDFRLKNSFSVETEIKDVIYTNFHLDEKSSEL
SQCLCVLEKSCLNIFTEVGKLFIASLPFKVKKIWGISKGICAEREANSKD
AEEEKGMPTLFSLAHPTEDFKPVVYHYLDNRKPMYFTDATQHIVFTSPKD
SLIMTYDSVLGLHSVWKARKALEQDFPEVLSHQDSLPEFGMMNQSSQLGA
LKGGPGITGRFSMSPSVTTSNKRHSCPPIPIHLQQKGSPGASSSPMSRKG
FSPAGHLHKGSPHHHLHANSHHHEAHESSYVSEINGSKRSHMNSLMMFRM
SCADTRLEEEAEPLPPNLCLEQVWQEQTTTIRYGLKGKSVFCFMSTDFNG
ISYLGYLVKGLSKLKLLKIHYGKFEKATEIECMDAGPLQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_027552	XLOC_027552	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00043882	TCONS_00043882	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024990	Apc1

Vocabulary: **Cellular Component**
Term	Definition
GO:0005680	anaphase-promoting complex

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005680	anaphase-promoting complex

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024990	Anaphase-promoting complex subunit 1	PFAM	PF12859	ANAPC1	coord: 53..100 e-value: 1.2E-7 score: 32.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..283

Blast

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BLAST of TCONS_00043882-protein vs. Swiss-Prot (Human)
Match: APC1 (Anaphase-promoting complex subunit 1 OS=Homo sapiens GN=ANAPC1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 9.873e-36
Identity = 111/413 (26.88%), Postives = 194/413 (46.97%), Query Frame = 0

Query:    1 QVYWKGNTVAVLSFDKHQNDFRLKNSFSVETEIKDVIYTNFHLDE-------KSSELSQCLCVLEKSCLNIFTEVGKLFIASLPFKVKKIWGISKGICAEREANSKDA---EEEKGMPTLFSLAHPTEDFKPVVYH---YLDNRKPMYFTDATQHIVFTSPKDSLIMTYDSVLGLHSVWKARKALEQDFPEVL--SHQDSLPEFGMMNQS--SQLGAL-KGGPGITGRFSMSPSVTTSNKRHSCPPIPIHLQQKGSPGASSSPMSRKGFSPAGHLHKGSPHHHLHANSHHHEAHESSYVSEINGSKRSHMNSLMMFRMSCADTRLEEEAEPLPPNLCLEQVWQEQTTTIRYGLKGKSVFCFMSTDFNGISYLGYLVKGLSKLKLLKIHYGK------FEKATEIECMDAGPLQ 389
            ++Y  GN V + S         +  +F+V++ ++  ++ +F + +        S+E+ +C+C+L+ SC+N+ +  GK +IASLPF+V  +W    G+  ER A+S +       + +PT+FS+ HP ++  P+V        + +  Y  D    IVF +   S++MTYD+V  +HSVW  R+   ++   VL  S Q   P+    + S  + L +L KG   +T  F    S+ + ++  S P +        SP  S+     +  SPA  +H  S     + +SH+      S    I+ S  S+ N           + L  E EP+ P LC++ +W E  T IR     ++   F+++D  G  +L +LV+   +L+ +K           F   T I   DA P++
Sbjct:   92 ELYVAGNMV-IWSKGSKSQALAVYKAFTVDSPVQQALWCDFIISQDKSEKAYSSNEVEKCICILQSSCINMHSIEGKDYIASLPFQVANVWPTKYGLLFERSASSHEVPPGSPREPLPTMFSMLHPLDEITPLVCKSGSLFGSSRVQYVVDHAMKIVFLNTDPSIVMTYDAVQNVHSVWTLRRVKSEEENVVLKFSEQGGTPQNVATSSSLTAHLRSLSKGDSPVTSPFQNYSSIHSQSRSTSSPSL-----HSRSPSISNMAALSRAHSPALGVHSFSGVQRFNISSHNQSPKRHS----ISHSPNSNSNG----------SFLAPETEPIVPELCIDHLWTETITNIREK-NSQASKVFITSDLCGQKFLCFLVESQLQLRCVKFQESNDKTQLIFGSVTNIPAKDAAPVE 483

The following BLAST results are available for this feature:

BLAST of TCONS_00043882-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00043882-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
APC1	9.873e-36	26.88	Anaphase-promoting complex subunit 1 OS=Homo sapie...	[more]

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TCONS_00043882-protein (polypeptide) - C. hemisphaerica