TCONS_00043798-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00043798-protein
Unique Name	TCONS_00043798-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	208

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00043798-protein ID=TCONS_00043798-protein|Name=TCONS_00043798-protein|organism=Clytia hemisphaerica|type=polypeptide|length=208bp
MFGRSMFGDDPFFSSSSNMFEEFNRMDQMMSSFGMPGGRMGQPPHHSDIG
DSSNRQQRNHQRRPHQQQQHQNEMLSPIGRGGMFGGGSVFQEMNRMMADM
ERGSSSSTGQFYSSSKVMSYSRGGEGDQPKYYEASSQITQGPDGLRQTRK
SERNSETGTDRMAIGHHIHDRGHVVERIRNNRTNEREEKQNFINLDEGTS
LLFFVSCH

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_027472	XLOC_027472	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00043798	TCONS_00043798	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019376	Myeloid_leukemia_factor

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019376	Myeloid leukemia factor	PFAM	PF10248	Mlf1IP	coord: 26..198 e-value: 6.4E-42 score: 143.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..158

Blast

[Close]

BLAST of TCONS_00043798-protein vs. Swiss-Prot (Human)
Match: MLF2 (Myeloid leukemia factor 2 OS=Homo sapiens GN=MLF2 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.846e-33
Identity = 61/142 (42.96%), Postives = 96/142 (67.61%), Query Frame = 0

Query:   63 RPHQQQQHQNEMLSPIGRGGMFGG-GSVFQEMNRMMADMERGSSSSTGQFYSSSKVMSYSRGGEGDQPKYYEASSQITQGPDGLRQTRKSERNSETGTDRMAIGHHIHDRGHVVERIRNNRTNEREEKQNFINLDEGTSLLF 203
            RP  ++  Q   +SP G  GM GG   +F  MN M+ +ME  ++    Q +SSS V+SYS  G+G  PK Y+ +S++   P G+R+TR++ R+S++G ++M+IGHHI DR H+++R RN+RT ++EE+Q++INLDE  +  F
Sbjct:   52 RPASRRMQQAGAVSPFGMLGMSGGFMDMFGMMNDMIGNMEHMTAGGNCQTFSSSTVISYSNTGDG-APKVYQETSEMRSAPGGIRETRRTVRDSDSGLEQMSIGHHIRDRAHILQRSRNHRTGDQEERQDYINLDESEAAAF 192

The following BLAST results are available for this feature:

BLAST of TCONS_00043798-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00043798-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MLF2	5.846e-33	42.96	Myeloid leukemia factor 2 OS=Homo sapiens GN=MLF2 ...	[more]

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TCONS_00043798-protein (polypeptide) - C. hemisphaerica