TCONS_00043453-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043453-protein
Unique NameTCONS_00043453-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length132

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043453-protein ID=TCONS_00043453-protein|Name=TCONS_00043453-protein|organism=Clytia hemisphaerica|type=polypeptide|length=132bp
GIILDNVCRKRTKHIWFSISSDLKHDAERDLRDIGCYVKVIDGCQQLDQK
TKTFGLSSEYKEGVVFSTYSTLVSSSQKDSKKTCRLDQLIEWCGKDFDGC
LIFDESHKAKHFMPGKEKSSTKVAVAVTNIQR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027149XLOC_027149Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043453TCONS_00043453Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13872AAA_34coord: 1..132
e-value: 1.8E-42
score: 145.2
NoneNo IPR availableGENE3D3.40.50.300coord: 2..123
e-value: 2.2E-4
score: 20.2

Blast
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BLAST of TCONS_00043453-protein vs. Swiss-Prot (Human)
Match: SBNO1 (Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.968e-33
Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = 0 
Query:    1 GIILDNVCRKRTKHIWFSISSDLKHDAERDLRDIGCYVKVIDGCQQLDQKTKTFGLSSEYKEGVVFSTYSTLVSSSQKDSKKTCRLDQLIEWCGKDFDGCLIFDESHKAKHFMPGKEKSSTKVAVAVTNIQ 131
            GII +N    R + +WFS+S+DLK+DAERDLRDIG    ++    +      +   +   K+GV+F+TYS+L+  SQ   K   RL QL+ WCG DFDG ++FDE HKAK+  P      TK  +AV  +Q
Sbjct:  333 GIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQ 463
The following BLAST results are available for this feature:
BLAST of TCONS_00043453-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SBNO14.968e-3343.51Protein strawberry notch homolog 1 OS=Homo sapiens... [more]
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