TCONS_00042797-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042797-protein
Unique NameTCONS_00042797-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length144

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042797-protein ID=TCONS_00042797-protein|Name=TCONS_00042797-protein|organism=Clytia hemisphaerica|type=polypeptide|length=144bp
MEVIEALPLANTPDVFGLHPNAEIGYSTTAAKDMWTQLVELQPQTGGDSG
GKSREEFIGKIAADIQEKLPTLYDVNGFRKKLGLEISPTTVVLLQELDVL
IRKMGTTLMNLQRALAGEVGMDNGLFQKKTVYPLLRRSISVPRG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026595XLOC_026595Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042797TCONS_00042797Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004273Dynein_heavy_dom
Vocabulary: Cellular Component
TermDefinition
GO:0030286dynein complex
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
cellular_component GO:0030286 dynein complex
molecular_function GO:0003777 microtubule motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004273Dynein heavy chain domainPFAMPF03028Dynein_heavycoord: 2..125
e-value: 1.8E-25
score: 89.2

Blast
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BLAST of TCONS_00042797-protein vs. Swiss-Prot (Human)
Match: DYH10 (Dynein heavy chain 10, axonemal OS=Homo sapiens GN=DNAH10 PE=1 SV=4)

HSP 1 Score: 163.31 bits (412), Expect = 2.060e-47
Identity = 78/128 (60.94%), Postives = 101/128 (78.91%), Query Frame = 0 
Query:    1 MEVIEALPLANTPDVFGLHPNAEIGYSTTAAKDMWTQLVELQPQTGGDSGGKSREEFIGKIAADIQEKLPTLYDVNGFRKKLGLEISPTTVVLLQELD---VLIRKMGTTLMNLQRALAGEVGMDNGL 125
            +E IEALPLANTP+VFGLHPNAEIGY T AA+DMW  L+ELQPQTG  S G SR+++IG++A +I+ K+P ++D++  RK+LG  +SPT+VVLLQEL+    L+ +M  +L  LQRALAGEVGM N L
Sbjct: 4143 VEAIEALPLANTPEVFGLHPNAEIGYYTQAARDMWAHLLELQPQTGESSSGISRDDYIGQVAKEIENKMPKVFDLDQVRKRLGTGLSPTSVVLLQELERFNKLVVRMTKSLAELQRALAGEVGMSNEL 4270
The following BLAST results are available for this feature:
BLAST of TCONS_00042797-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DYH102.060e-4760.94Dynein heavy chain 10, axonemal OS=Homo sapiens GN... [more]
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