TCONS_00042402-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042402-protein
Unique NameTCONS_00042402-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length160

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042402-protein ID=TCONS_00042402-protein|Name=TCONS_00042402-protein|organism=Clytia hemisphaerica|type=polypeptide|length=160bp
XTKKLSEVNYELSDPLNKRKPTAVHVNRLKSFKDPNFRVMQDEDKSSDES
EDIEGSEDIGGEPEEEKDDSSENSSNQENQNGGTEEHEQGNSSQNPDQDG
ANGRISQSLDPNDDEKGEQEDEKMYMVERILKMKMKRSKRYFLIKWQDFP
EEENTWEPEX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026246XLOC_026246Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042402TCONS_00042402Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023780Chromo_domain
IPR000953Chromo/chromo_shadow_dom
IPR016197Chromodomain-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023780Chromo domainPFAMPF00385Chromocoord: 125..159
e-value: 1.2E-11
score: 44.2
NoneNo IPR availableGENE3D2.40.50.40coord: 112..160
e-value: 1.7E-14
score: 52.8
NoneNo IPR availableCDDcd00024CHROMOcoord: 125..159
e-value: 3.52076E-8
score: 45.7179
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 125..160
score: 14.983
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 111..159

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042402-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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