TCONS_00042362-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042362-protein
Unique NameTCONS_00042362-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length670

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042362-protein ID=TCONS_00042362-protein|Name=TCONS_00042362-protein|organism=Clytia hemisphaerica|type=polypeptide|length=670bp
FKKKKCFNCQKTGHISKFCPEIKSETGAIRDDVKPAPRTIIKINTCGKTV
DFLYDTGSQVTIMKRQDFENLPNKPPLQKVERSGTAVDGTPFKFDGIAYL
NLSFPSSDSNRHRQYTLEYEPILISSNVESNIYGAQTEEKFRKCERDIEN
STLSYTTKENEKVTVQCYREKISSVTAYVKVAKVAYLPPNHTMMIKGRIN
SPKTITGTSFLCENEELPNCLNVNELTFENVERNITIPITNHSEVQQKLK
KGQIVAEIREIESCPEESKIEVNATDASNKLPLDTESTERNEIQKLETIL
ETYYGAIENSPLSRSKLPLKHSINLTDDAPTVCAPRSIPHARKEAVNEQI
KTLLENGCIERSYSPYSAPIVPVLKPDGSLRFCIDYRKLNTKTINNKYPI
ARNEDLLDGLKGCKYFSVIDLKAAYHHIAMEETDKLKTAFDSPQGKFQWI
VMPFGLTGAAFTLSANLSEVLKDCHXLGMVAFFRKFIPDFSHYAADLFSL
LKKGTRFQWTEKHATSFNEIKRLLSENVLLLHPDYTKPFVLFTDASNVAV
GFTLTQENEGTFCPILYVGRSLSICEMNYCTTDKELLGLYYSVKKSEFYI
TDQIVIVYTDHKPLTYLSTFRDIVNKRYRWIEYIENIGIIIRYIEGKDNV
IGDYISRNLKTDIKTEKRWR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026207XLOC_026207Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042362TCONS_00042362Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR000477RT_dom
IPR021109Peptidase_aspartic_dom
IPR001995Peptidase_A2_cat
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
GO:0004190aspartic-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 5..21
e-value: 5.5E-4
score: 29.3
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 1..34
e-value: 1.2E-6
score: 28.2
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 4..21
e-value: 1.0E-4
score: 22.1
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 5..21
score: 9.57
IPR001878Zinc finger, CCHC-typeSUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 2..25
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 374..533
e-value: 5.1E-9
score: 35.9
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 354..554
score: 9.429
NoneNo IPR availableGENE3D3.30.70.270coord: 468..578
e-value: 9.1E-31
score: 105.9
NoneNo IPR availableGENE3D3.10.10.10coord: 322..465
e-value: 3.4E-39
score: 133.4
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 540..658
e-value: 1.31646E-34
score: 126.838
NoneNo IPR availableCDDcd01647RT_LTRcoord: 359..483
e-value: 5.59213E-43
score: 151.979
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 318..643
IPR021109Aspartic peptidase domainGENE3D2.40.70.10coord: 35..155
e-value: 1.2E-7
score: 31.6
IPR001995Peptidase A2A, retrovirus, catalyticPROSITEPS50175ASP_PROT_RETROVcoord: 50..137
score: 8.937

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042362-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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