TCONS_00042037-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042037-protein
Unique NameTCONS_00042037-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length232

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042037-protein ID=TCONS_00042037-protein|Name=TCONS_00042037-protein|organism=Clytia hemisphaerica|type=polypeptide|length=232bp
LQGVSPNLAGAGSSWGLYFFSFNFCKASLKDYQQVESLSATSHLLAGTIA
GVFTLSLTNPIWVIKTRMCLQTGATSVNEVYYSGVLDGLKKLYQQEGLRG
YYRGFVPGLFGVSHGALQFMAYEELKKMRSKYTGQPAESKLNPLEYIAMA
ALSKVFAVVSTYPYQVLRSRLQDAQYLGHYNGMVDTFQKILRHEGVSGLY
KGMFMSMLRVTPACCITFLVYENVSHFLLEKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025924XLOC_025924Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042037TCONS_00042037Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 141..231
e-value: 2.2E-20
score: 72.3
coord: 38..131
e-value: 9.9E-24
score: 83.0
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 141..227
score: 21.312
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 38..128
score: 24.444
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 1..228
e-value: 2.1E-65
score: 219.9
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 2..223

Blast
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BLAST of TCONS_00042037-protein vs. Swiss-Prot (Human)
Match: MFTC (Mitochondrial folate transporter/carrier OS=Homo sapiens GN=SLC25A32 PE=1 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 4.948e-85
Identity = 129/231 (55.84%), Postives = 168/231 (72.73%), Query Frame = 0 
Query:    2 QGVSPNLAGAGSSWGLYFFSFNFCKASLKDYQQVESLSATSHLLAGTIAGVFTLSLTNPIWVIKTRMCLQTGATSVNEVY--YSGVLDGLKKLYQQEGLRGYYRGFVPGLFGVSHGALQFMAYEELKKMRSKYTGQPAESKLNPLEYIAMAALSKVFAVVSTYPYQVLRSRLQDAQYLGHYNGMVDTFQKILRHEGVSGLYKGMFMSMLRVTPACCITFLVYENVSHFLLE 230
            QGV+PN+ GAG SWGLYFF +N  K S K   + E L AT +L++   AG  TL +TNP+WV KTR+ LQ  A  VN  +  Y G+ D L K+Y+ EG+RG Y+GFVPGLFG SHGALQFMAYE LK   +++  +  E++L+ +EYI++AALSK+FAV +TYPYQV+R+RLQD      Y+G++D   K  R EGV G YKG+  +++RVTPACCITF+VYENVSHFLL+
Sbjct:   83 QGVTPNIWGAGLSWGLYFFFYNAIK-SYKTEGRAERLEATEYLVSAAEAGAMTLCITNPLWVTKTRLMLQYDAV-VNSPHRQYKGMFDTLVKIYKYEGVRGLYKGFVPGLFGTSHGALQFMAYELLKLKYNQHINRLPEAQLSTVEYISVAALSKIFAVAATYPYQVVRARLQDQHMF--YSGVIDVITKTWRKEGVGGFYKGIAPNLIRVTPACCITFVVYENVSHFLLD 309

HSP 2 Score: 76.2554 bits (186), Expect = 2.451e-16
Identity = 59/189 (31.22%), Postives = 90/189 (47.62%), Query Frame = 0 
Query:   42 SHLLAGTIAGVFTLSLTNPIWVIKTRMCLQTGATSVNEVYYSGVLDGLKKLYQQEGLRGYYRGFVPGLFGVS-HGALQFMAYEELKKMRSKYTGQPAESKLNPLEYIAMAALSKVFAVVSTYPYQVLRSRLQDAQYLG-------HYNGMVDTFQKILRHEGVSGLYKGMFMSMLRVTPACCITFLVYE 222
             +L+AG   GV +    +P+ ++K R  +  G     +  Y+G+L  L  +++ +GLRG Y+G  P ++G      L F  Y  +K     Y  +    +L   EY+  AA +    +  T P  V ++RL   QY          Y GM DT  KI ++EGV GLYKG F+  L  T    + F+ YE
Sbjct:   24 ENLIAGVSGGVLSNLALHPLDLVKIRFAVSDGLELRPK--YNGILHCLTTIWKLDGLRGLYQGVTPNIWGAGLSWGLYFFFYNAIK----SYKTEGRAERLEATEYLVSAAEAGAMTLCITNPLWVTKTRLM-LQYDAVVNSPHRQYKGMFDTLVKIYKYEGVRGLYKG-FVPGLFGTSHGALQFMAYE 204
The following BLAST results are available for this feature:
BLAST of TCONS_00042037-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFTC4.948e-8555.84Mitochondrial folate transporter/carrier OS=Homo s... [more]
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