TCONS_00041895-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041895-protein
Unique NameTCONS_00041895-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length223

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041895-protein ID=TCONS_00041895-protein|Name=TCONS_00041895-protein|organism=Clytia hemisphaerica|type=polypeptide|length=223bp
RLLFQISFNGVVDRMVKNDIDVKCPQHEKECQWQGKIIDYKDHETKCDFV
MVPCKNKGCNKSVARINMADHKSICHYQIVECEYCRKKTTKLEFGNHLCG
ECPLVNVKCPNEGCQSALVRQEIPEHLAEECLYEKIECEYFDVGCNQKVQ
RKDLDKHNKINLAKHQKFMLHDYKLMKMQLAEVCQSNKQLKDDLKKANEN
IERLNPRNQNQLKPLLCGKKYRV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025790XLOC_025790Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041895TCONS_00041895Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 180..207
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 86..114
e-value: 6.8E-7
score: 28.9
coord: 14..60
e-value: 2.5E-14
score: 52.7
coord: 115..157
e-value: 2.0E-13
score: 49.8
coord: 61..85
e-value: 5.3E-8
score: 32.4
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 43..97
e-value: 6.7E-7
score: 29.8
coord: 101..157
e-value: 3.8E-15
score: 56.2
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 43..88
score: 9.923
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 97..154
score: 13.418
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 80..175
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 20..92

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041895-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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