TCONS_00041555-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041555-protein
Unique NameTCONS_00041555-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length265

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041555-protein ID=TCONS_00041555-protein|Name=TCONS_00041555-protein|organism=Clytia hemisphaerica|type=polypeptide|length=265bp
MASNNNSRPSSKRSRSRTCAVVGCKSSDYRFSKWEDEWCDLHQTTYSNSV
CTCLPPFQLFTFPTERENPEARMIWRELINRREPSNKNLLWSPSRHKQSR
VCSVHFPDGMPTKTNPHPTLFLNNNVDIDVAIGNKNKTTTRRRLTYNINN
NDDDAVVPNPTDVPNPEIVNDSSLAIDFDVSPGHIPSTRDESPINEPIIN
NGNRQCLFLPSFFVFRHGTYRNMFFSCMVTVASLLCFGWMLKSKYFAALK
EINKLKDDLHKKELL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025497XLOC_025497Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041555TCONS_00041555Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006612Znf_C2CH
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006612Zinc finger, C2CH-typeSMARTSM00980THAP_2coord: 17..127
e-value: 8.9E-7
score: 38.5
IPR006612Zinc finger, C2CH-typePFAMPF05485THAPcoord: 19..113
e-value: 2.3E-6
score: 28.4
IPR006612Zinc finger, C2CH-typePROSITEPS50950ZF_THAPcoord: 15..121
score: 13.61

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041555-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top