TCONS_00041060-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041060-protein
Unique NameTCONS_00041060-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length125

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041060-protein ID=TCONS_00041060-protein|Name=TCONS_00041060-protein|organism=Clytia hemisphaerica|type=polypeptide|length=125bp
LLLQVAIVIPYRNRESQLSIFLRHYHPIFIRQNLHYRIFVIDQVDKDPFN
RGKLMNVGYNEAKKYFPYDCVVFHDVDLLLEDDRLMYSCQSSPQHLSVSL
DKYNYRLLYQELFGGIEMFTRDHFE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025079XLOC_025079Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041060TCONS_00041060Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003859Galactosyl_T
IPR027791Galactosyl_T_C
IPR027995Galactosyl_T_N
IPR029044Nucleotide-diphossugar_trans
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016757transferase activity, transferring glycosyl groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003859Beta-1,4-galactosyltransferasePRINTSPR02050B14GALTRFASEcoord: 107..125
score: 31.3
coord: 39..58
score: 52.6
coord: 70..89
score: 53.05
IPR027791Galactosyltransferase, C-terminalPFAMPF02709Glyco_transf_7Ccoord: 95..125
e-value: 2.0E-5
score: 24.0
IPR027995Galactosyltransferase, N-terminalPFAMPF13733Glyco_transf_7Ncoord: 4..90
e-value: 9.9E-38
score: 128.7
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 2..125
e-value: 9.7E-16
score: 57.3
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 4..125

Blast
[Close]
BLAST of TCONS_00041060-protein vs. Swiss-Prot (Human)
Match: B4GT1 (Beta-1,4-galactosyltransferase 1 OS=Homo sapiens GN=B4GALT1 PE=1 SV=5)

HSP 1 Score: 124.79 bits (312), Expect = 2.314e-35
Identity = 55/121 (45.45%), Postives = 79/121 (65.29%), Query Frame = 0 
Query:    4 QVAIVIPYRNRESQLSIFLRHYHPIFIRQNLHYRIFVIDQVDKDPFNRGKLMNVGYNEAKKYFPYDCVVFHDVDLLLEDDRLMYSCQSSPQHLSVSLDKYNYRLLYQELFGGIEMFTRDHF 124
            +VAI+IP+RNR+  L  +L + HP+  RQ L Y I+VI+Q     FNR KL+NVG+ EA K + Y C VF DVDL+  +D   Y C S P+H+SV++DK+ + L Y + FGG+   ++  F
Sbjct:  177 KVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQF 297
The following BLAST results are available for this feature:
BLAST of TCONS_00041060-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B4GT12.314e-3545.45Beta-1,4-galactosyltransferase 1 OS=Homo sapiens G... [more]
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