TCONS_00039938-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039938-protein
Unique NameTCONS_00039938-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length502

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039938-protein ID=TCONS_00039938-protein|Name=TCONS_00039938-protein|organism=Clytia hemisphaerica|type=polypeptide|length=502bp
MLFPLDLGLFNIRNKFLVALDILQDWWESLKLGTPLTNIITAKMHALLKK
VPNERRPEVSKFKYHLEILYDGYYGFECMTLRSLDDVICGYCGIAGKIYF
GDGNEKNCCGLKGIDVSDSSNPPVSPSSNDALSSNNIQSMTTMLDEVKLH
LVERSTFAKHRQEFRINYKDIPPLIAPSNARAELNTEGYKKSGYLENPQN
KVKGDAIMLEKLFKDGKIQSIDDVESMSLDSLRQLCKQCMIPTSLKSMAM
LRLDLRTLYATILVGSSNCHQFVKAEGHTGGFYHIVCRHGTTVASKFMVL
TESVRDAADLWLSLKYPPVLFVCDTPCTFTRHINQRSPDEAIAYWGENDG
CFEVPTLGKDPEPNKSVPDIVPGEHSDSNTVAHLYLDQKVHPVTGKTQRY
VCGDRFHAKKNPHKSPLCAYHNIDLCQQAKTVKTSYQESQNNQKNEKRNR
SSCSQNFLHHIMYNYLMNFYDNERVVLKQLNDIKERTGQKEVVRDEFGRF
QV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024187XLOC_024187Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039938TCONS_00039938Clytia hemisphaericatranscript
Blast
[Close]
BLAST of TCONS_00039938-protein vs. Swiss-Prot (Human)
Match: HMGX3 (HMG domain-containing protein 3 OS=Homo sapiens GN=HMGXB3 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 4.383e-45
Identity = 139/503 (27.63%), Postives = 228/503 (45.33%), Query Frame = 0 
Query:    8 GLFNIRNKFLVALDILQDWWESLKLGT-PLTNIITAKMHALLKKVPNERRPEVS--KFKYHLEILYDGYYGFECMTLRSLDDVICGYCGIAGKIYFGDGNEKNCCGLKGIDVSDSSNPPVSPSSNDALSSNNIQSMTTMLDEVKLHLVERSTFAKHRQEFRINYKDIPPLIAP-SNARAELNTEGYKKSGYLENPQNKVKGDAIMLEKLFKDGKIQSIDDVESMSLDSLRQLCKQCMIPTSLK-SMAMLRLDLRTLYATILVGSSNCHQFVKAEGH-TGGFYHIVCRHGTTVASKFMVLTESVRDAADLWLSLKYPPVLFVCDTPCTFTRHINQRSPDEAIAYWGENDGCFEVPTLGKDPEPNKSVPDIVPGEHSDSNTVAHLYLDQKVHPVTGKTQRYVCGDRFHAKKNPHKS-PLCAYHNIDLCQQAKTVKTSYQESQNNQKNEKRNRSSCSQNFLHHIMYNYLMNFYDNERVVLKQLNDIKERTGQKEVV-RDEFGRFQV 502
            GLFN+ NK LV+LD+L      +KLG  P  +I     + +LK V  +    ++  +     E+L +GY+ FEC+T+R  +D+ICG CG+A K+     +E+N   LK ++           +  + L SN + ++      ++  ++E+  F       + +   I P   P       +NTE  K           V G    L +L ++G  + +D++ S S + L+ L +QC IP   + S   L   L  LY ++     N  + ++   H TGG  + VC H     SK++V  ES RD  DL  S ++ P ++V D   +     +   P+     WG N GCF  PT   +P  + S P+++   ++   T     +    HPVT    R +     HA   P+   P   +H++ LC +     T      +++ N  R R     N  H+ +YN LM+F  +  +V +Q++DI +     EVV RD   R  V
Sbjct: 1051 GLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVSI-----NVVLKSVQEQTEKTLTSEELSQLQELLCNGYWAFECLTVRDYNDMICGICGVAPKVEMAQRSEENVLALKSVEF----------TWPEFLGSNEV-NVEDFWATMETEVIEQVAFPASIPITKFDASVIAPFFPPLMRGAVVVNTEKDKNLDV-----QPVPGSGSALVRLLQEGTCK-LDEIGSYSEEKLQHLLRQCGIPFGAEDSKDQLCFSLLALYESV----QNGARAIRPPRHFTGGKIYKVCPHQVVCGSKYLVRGESARDHVDLLASSRHWPPVYVVDMATSVALCADLCYPELTNQMWGRNQGCFSSPT---EPPVSVSCPELLDQHYTVDMTETEHSIQ---HPVTKTATRRI----VHAGLQPNPGDPSAGHHSLALCPELAPYATILASIVDSKPNGVRQRPIAFDNATHYYLYNRLMDFLTSREIVNRQIHDIVQSCQPGEVVIRDTLYRLGV 1517
The following BLAST results are available for this feature:
BLAST of TCONS_00039938-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMGX34.383e-4527.63HMG domain-containing protein 3 OS=Homo sapiens GN... [more]
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