TCONS_00039833-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039833-protein
Unique NameTCONS_00039833-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length114

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039833-protein ID=TCONS_00039833-protein|Name=TCONS_00039833-protein|organism=Clytia hemisphaerica|type=polypeptide|length=114bp
MSKRIRSTMSKTLEQKSILQKYYDQGMTSYGKDHYEAKQMVLKAVEETGL
SEKQVKDWINNQNKPPKVSKTEKIYTKKPRGCDLFKRKYFENLKGLLRIL
IYLMHKSSRIAECL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024109XLOC_024109Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039833TCONS_00039833Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 1..78
e-value: 1.6E-7
score: 30.5
NoneNo IPR availableCDDcd00086homeodomaincoord: 3..62
e-value: 0.00238633
score: 31.4449
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 2..69
score: 8.633
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 2..72

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039833-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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