TCONS_00039228-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039228-protein
Unique NameTCONS_00039228-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length279

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039228-protein ID=TCONS_00039228-protein|Name=TCONS_00039228-protein|organism=Clytia hemisphaerica|type=polypeptide|length=279bp
MCNTKPKSETTTTTNNNTQNLDDFQRQLLESHNKRRHEHGVSPLEWDNTL
AAEAQAWADKLAREENLYHSSVDVRHHLGENLANNNRKIFTGEDATEQWY
GEIKNFDYEHSDHFEVQTGHFTQVVWKHSKKVGAAMATSQSGKHYVCARY
DPPGNMRGVFERNLQLMEDVEEEVVEEDGTVERKMVKRLKRRLNDPLKDK
TLGVIQHSNTLEIEDEGRVSFDHVYEEAKETGVDDGLLRQTASVNTKGAP
PKRTQPAYADNDYFKPGKNYSVTHNIYGF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023638XLOC_023638Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039228TCONS_00039228Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR002413V5_allergen
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 118..134
score: 49.91
coord: 44..62
score: 39.28
coord: 95..108
score: 31.58
coord: 145..158
score: 40.38
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 44..62
score: 43.42
coord: 93..108
score: 26.56
coord: 117..136
score: 42.19
IPR014044CAP domainSMARTSM00198SCP_3coord: 23..158
e-value: 3.1E-34
score: 129.7
IPR014044CAP domainGENE3D3.40.33.10coord: 16..169
e-value: 9.4E-41
score: 139.0
IPR014044CAP domainPFAMPF00188CAPcoord: 29..147
e-value: 8.3E-23
score: 81.5
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 18..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 119..129
IPR034113Golgi-associated plant pathogenesis-related protein 1, SCP domainCDDcd05382SCP_GAPR-1_likecoord: 23..156
e-value: 2.88115E-55
score: 175.861

Blast
[Close]
BLAST of TCONS_00039228-protein vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 5.188e-29
Identity = 58/143 (40.56%), Postives = 86/143 (60.14%), Query Frame = 0 
Query:   24 FQRQLLESHNKRRHEHGVSPLEWDNTLAAEAQAWADKLAREENLYHSSVDVRHHLGENLANNNRKIFTGEDATEQWYGEIKNFDYEHSDHFEVQTGHFTQVVWKHSKKVGAAMATSQSGKHYVCARYDPPGNM--RGVFERNL 164
            F  ++L++HN+ R +HGV PL+    L  EAQ +++ LA    L HS    R   GENLA  +    TG++  ++WY EIKN++++    F   TGHFT +VWK++KK+G   A++  G  +V ARY P GN+   G FE N+
Sbjct:    9 FHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQ-TGKEVADRWYSEIKNYNFQQPG-FTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENV 149
The following BLAST results are available for this feature:
BLAST of TCONS_00039228-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR15.188e-2940.56Golgi-associated plant pathogenesis-related protei... [more]
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