TCONS_00037874-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00037874-protein
Unique NameTCONS_00037874-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length655

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00037874-protein ID=TCONS_00037874-protein|Name=TCONS_00037874-protein|organism=Clytia hemisphaerica|type=polypeptide|length=655bp
MTMETGKEKSSKSQLKQKQRNAKKYHKKATNLLKEFEGLNITSTPSVCLF
IGNGGMLCGQTRENLLELFTSYGVVADLVMLPKKSFALVQMQSIVCAEKA
VNALEGHILNNCDNVKQPTSVPLYFQYLDTPDLHFLRKSAENESYPDEDV
GEGLIEGLEIYREFIDEEYEKDLFDFFHRQCCDQEAGENVLKHRSVLHYG
YKFLYGSNNIDKEKPMDEGIPRICQQLLDKMLADGLIHELPDQLTINQYR
PGQGIPPHVDTHSAFQDGIFSLTLNSPVSMDFTNPEGRTKSVSLARRSLL
AMKGESRYLWSHGITPRKYDIVFCKDPTQNTEDENAKHLTMRERGIRISL
TFRKILRGECRCAFSTKCDSQNDDVTKKTWAVPLSQKEASSLEDELVYKV
YDEIAEHFSDTRHSPWPRVKKFLCNLPNGSIVADVGCGNGKYLGVNNQLM
MMGSDRSVNLASICEERGHQIMVSDCLTLPYRSSCFDGCICIAVIHHLST
EQRRLEAIQELVRITRVRGLILVYVWALEQDTEEENEGVLLGTDGTKILN
PSYSIDSEKLEALDLETNKYSVSKESNDKQYIQIAEGRNTFQQQDLLVPW
HLKNTNPSREEHVFHRFYHVFKRGELETLCRQLPNVEVRDLYLDCGNWCI
VLQKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_022578XLOC_022578Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00037874TCONS_00037874Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027450AlkB-like
IPR000504RRM_dom
IPR013216Methyltransf_11
IPR005123Oxoglu/Fe-dep_dioxygenase
IPR029063SAM-dependent_MTases
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008168methyltransferase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 15..35
NoneNo IPR availableGENE3D3.40.50.150coord: 394..655
e-value: 6.0E-24
score: 84.2
NoneNo IPR availableGENE3D3.30.70.330coord: 2..116
e-value: 5.2E-9
score: 35.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 154..356
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likeGENE3D2.60.120.590coord: 136..364
e-value: 7.5E-41
score: 139.6
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likePFAMPF135322OG-FeII_Oxy_2coord: 212..353
e-value: 1.6E-14
score: 54.5
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 61..112
e-value: 2.4E-6
score: 27.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 47..130
score: 9.917
IPR000504RNA recognition motif domainSUPERFAMILY54928RNA-binding domain, RBDcoord: 42..112
IPR013216Methyltransferase type 11PFAMPF08241Methyltransf_11coord: 434..522
e-value: 1.1E-9
score: 38.7
IPR005123Oxoglutarate/iron-dependent dioxygenasePROSITEPS51471FE2OG_OXYcoord: 240..356
score: 11.358
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 600..648
coord: 397..542

Blast
[Close]
BLAST of TCONS_00037874-protein vs. Swiss-Prot (Human)
Match: ALKB8 (Alkylated DNA repair protein alkB homolog 8 OS=Homo sapiens GN=ALKBH8 PE=1 SV=2)

HSP 1 Score: 481.871 bits (1239), Expect = 1.101e-162
Identity = 274/679 (40.35%), Postives = 382/679 (56.26%), Query Frame = 0 
Query:   11 SKSQLKQKQRNAKKYHKKATNLLKEFEGLNITSTPSVCLFIGNGGMLCGQTRENLLELFTSYGVVADLVMLPKKSFALVQMQSIVCAEKAVNALEGHILNNCDNVKQPTSVPLYFQYLDTPDLHFLRKSAENESYPDEDVGEGLIEGLEIYREFIDEEYEKDLFDFFH-RQCCDQEAGENVLKHRSVLHYGYKFLYGSNNIDKEKPMDEGIPRICQQLLDKMLADGLIHELPDQLTINQYRPGQGIPPHVDTHSAFQDGIFSLTLNSPVSMDFTNPEGRTKSVSLARRSLLAMKGESRYLWSHGITPRKYDIVFCKDPTQN-TEDENAKHLTMRERGIRISLTFRKILRGECRCAFSTKCDSQNDDVTKKTWAVPLSQKEASSLEDELVYKVYDEIAEHFSDTRHSPWPRVKKFLCNLPNGSIVADVGCGNGKYLGVNNQLMMMGSDRSVNLASICEERGHQIMVSDCLTLPYRSSCFDGCICIAVIHHLSTEQRRLEAIQELVRITRVRGLILVYVWALEQDTEEENEGVLLGTDGTKI----LNPSYSIDSEKLEALDLETNKYSVSK--ESNDKQ------------YIQIAEGRNTFQQQDLLVPWHLKNTNPSR--------------EEHVFHRFYHVFKRGELETLCRQLPNVEVRDLYLDCGNWCIVLQKT 655
            S  +L + ++   +   KA + L   EG+   S  +  L + NGG+  G +R  LL +    G+V  L+M P K ++  + ++   +++A   L G  +   D++ Q   + LY  +++      LR  A             L  GL +  E I  E EK L +     +  D +  +  LKHR V H+GY+F Y +NN+DK+KP+  G+P IC+  L+K L  G I   PDQ+TINQY PGQGIP H+DTHSAF+D I SL+L S + MDF +P+G    V L RRSLL M GESRYLW+HGIT RK+D V   +  ++     +   LT+ +RG+R S TFRK+ +  C C++   CDSQ  +      + P S KEAS LE E V++VY+EIA HFS TRH+PWP + +FL  LP+GSIVAD+GCGNGKYLG+N +L M+G DRS NL  IC ER  Q  V D L +P RS   D CI IAVIHH +T +RR+ A+QE+VR+ R  G  L+YVWA+EQ+  ++    L G   ++     +N   S+    +E +    ++ S S     ND Q             + +   R +F  QD+LVPWHLK  NP +                 VFHR+YHVF+ GELE  CR + +V +   Y D GNWC++LQK 
Sbjct:    7 SNYKLSKTEKKFLRKQIKAKHTLLRHEGIETVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEV--VDDLGQ--KITLYLNFVEKVQWKELRPQA-------------LPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQRKETPP---SFPESDKEASRLEQEYVHQVYEEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKYLGINKELYMIGCDRSQNLVDICRERQFQAFVCDALAVPVRSGSCDACISIAVIHHFATAERRVAALQEIVRLLRPGGKALIYVWAMEQEYNKQKSKYLRGNRNSQGKKEEMNSDTSVQRSLVEQMRDMGSRDSASSVPRINDSQEGGCNSRQVSNSKLPVHVNRTSFYSQDVLVPWHLKG-NPDKGKPVEPFGPIGSQDPSPVFHRYYHVFREGELEGACRTVSDVRILQSYYDQGNWCVILQKA 664
The following BLAST results are available for this feature:
BLAST of TCONS_00037874-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALKB81.101e-16240.35Alkylated DNA repair protein alkB homolog 8 OS=Hom... [more]
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