TCONS_00036668-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036668-protein
Unique NameTCONS_00036668-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length210

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036668-protein ID=TCONS_00036668-protein|Name=TCONS_00036668-protein|organism=Clytia hemisphaerica|type=polypeptide|length=210bp
LLKSKKPLPSIDKLEEYLSVYAPPEWLSNKDCKKFPYFPQIGDEVYYLKQ
GHHLYVKKVVQHNEYDIQENRQAYRRYDLSPAELCKLIGIQYDVGPPTMC
SLKLELIGKRKSTGNRRTITVRFHDMPNVDDFLVLKHIFEDSLSQGWSVG
DRFRCMIDATWYFGTIIEVSPLNEEFITSSFMSLVVRWDNDDEDRVSPWD
LEPIPDDTDT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021649XLOC_021649Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036668TCONS_00036668Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 141..209
e-value: 8.5E-4
score: 18.5

Blast
[Close]
BLAST of TCONS_00036668-protein vs. Swiss-Prot (Human)
Match: BRWD1 (Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens GN=BRWD1 PE=1 SV=4)

HSP 1 Score: 193.356 bits (490), Expect = 7.414e-57
Identity = 81/194 (41.75%), Postives = 130/194 (67.01%), Query Frame = 0 
Query:   16 EYLSVYAPPEWLSNKDCKKFPYFPQIGDEVYYLKQGHHLYVKKVVQHNEYDIQENRQAYRRYDLSPAELCKLIGIQYDVGPPTMCSLKLELIGKRKSTGNRRTITVRFHDMPNVDDFLVLKHIFEDSLSQGWSVGDRFRCMIDATWYFGTIIEVSPLNEEFITSSFMSLVVRWDNDDEDRVSPWDLEPIPDDTD 209
            E+L  + PP W+++   +K P+ PQ+GDEV Y +QGH  Y++ V ++N Y++  N++ +R+ DL   EL K++GI+Y+VGPPT+C LKL  I         ++ ++R+HDMP+V DFLVL+  ++++  + W   DRFR +ID  W+FGT++   P   ++  S F   +VRWDN + +++SPWD+EPIPD+ D
Sbjct:  936 EHLYEFHPPVWITDTTLRKSPFVPQMGDEVIYFRQGHEAYIEAVRRNNIYELNPNKEPWRKMDLRDQELVKIVGIRYEVGPPTLCCLKLAFIDPATGKLMDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQSCDRFRSIIDDAWWFGTVLSQEPYQPQYPDSHFQCYIVRWDNTEIEKLSPWDMEPIPDNVD 1129
The following BLAST results are available for this feature:
BLAST of TCONS_00036668-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BRWD17.414e-5741.75Bromodomain and WD repeat-containing protein 1 OS=... [more]
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