TCONS_00036201-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036201-protein
Unique NameTCONS_00036201-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length325

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036201-protein ID=TCONS_00036201-protein|Name=TCONS_00036201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
EKSEAFRESFSKLVELKSILPSETPFIALTATATNATVSFIETNLGMTDP
SRYIAVPHKSNIKYFVVKTSTRDPDENFGHIIEELRQKKYKAPRCIIFCR
LTDHVTAIFGAFKRALKSDFPDYTVRPFAMFHCYTQEEIQKFIIQSFSDP
KGSVRVLIATIAFGMGVDCKDLNIALHYGPPSATEDYFQETGRAGRNGKP
SYACIINYPKCLGSKKLKPEIKEYVRNKLICRRKMLLKQFDVNSHDIPAK
ECCDICESEVEEGLSKVPTYIQPFILSAQQENEETESESENEECEDFDNV
DKYRCRTGSLSSPDKEKEDGGDDDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021291XLOC_021291Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036201TCONS_00036201Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 275..295
NoneNo IPR availableGENE3D3.40.50.300coord: 59..260
e-value: 4.1E-28
score: 97.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..325
NoneNo IPR availableCDDcd00079HELICccoord: 61..203
e-value: 2.35233E-18
score: 78.0484
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 110..198
e-value: 2.2E-10
score: 50.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 80..198
e-value: 2.5E-14
score: 53.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 77..243
score: 14.164
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..51
score: 7.491
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..208

Blast
[Close]
BLAST of TCONS_00036201-protein vs. Swiss-Prot (Human)
Match: WRN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 8.827e-20
Identity = 80/299 (26.76%), Postives = 137/299 (45.82%), Query Frame = 0 
Query:    1 EKSEAFRESFSKLVELKSILPSETPFIALTATATNATVSFIETNLGMTDPSRYIAVPHKSNIKYFVVKTSTRDPDENFGHIIEELR--------QKKYKAPRCIIFC---RLTDHVTAIFGAFKRALKSDFPDYTVRPFA----MFHCYTQEEIQKFIIQSFSDPKGSVRVLIATIAFGMGVDCKDLNIALHYGPPSATEDYFQETGRAGRNGKPSYACIINYPKCLGSK-----------------KLKPEIKEYVRNKLICRRKMLLKQFD------VNSHDIPAKECCDICESEVE 261
            E    FR+SF KL  LK+ LP   P +ALTATA+++    I   L + +P        + N+ Y  V+  T       G+I+++L+          +++ P  II+C   ++T  VT   G  ++   S    +    F+    + H + ++EIQ                +IATIAFGMG++  D+   +HYG P   E Y+QE GRAGR+G  S   ++  P  +                    K+  ++++Y+ +   CRR+++L  F+       +   +  ++CCD C S ++
Sbjct:  675 EWGHDFRDSFRKLGSLKTALPM-VPIVALTATASSSIREDIVRCLNLRNPQITCTGFDRPNL-YLEVRRKT-------GNILQDLQPFLVKTSSHWEFEGP-TIIYCPSRKMTQQVT---GELRKLNLSCGTYHAGMSFSTRKDIHHRFVRDEIQ---------------CVIATIAFGMGINKADIRQVIHYGAPKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLLTEIRNEKFRLYKLKMMAKMEKYLHSSR-CRRQIILSHFEDKQVQKASLGIMGTEKCCDNCRSRLD 944
The following BLAST results are available for this feature:
BLAST of TCONS_00036201-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WRN8.827e-2026.76Werner syndrome ATP-dependent helicase OS=Homo sap... [more]
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