TCONS_00034881-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00034881-protein
Unique NameTCONS_00034881-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length212

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00034881-protein ID=TCONS_00034881-protein|Name=TCONS_00034881-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
LSYFQAPKVQKNTILASSTFDETSYISKTKLSESEDPYHRHKFNQQISDE
LDSDRPIPDTRPPQCLEESYDKRLSSTSIIITFHNEARSALLRTIKSVLD
RTPPHLLTEIILVDDFSANEKDGASLKDLPKIVLMRNGKREGLIRSRLKG
VSVAKSSILTFLDSHCEVNVGWIEPLLAQVEQDPLAIASPVIDIIKTDTL
EYKASSNYLKGV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020293XLOC_020293Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00034881TCONS_00034881Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001173Glyco_trans_2-like
IPR029044Nucleotide-diphossugar_trans
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001173Glycosyltransferase 2-likePFAMPF00535Glycos_transf_2coord: 78..206
e-value: 7.8E-26
score: 90.8
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 16..210
e-value: 1.3E-33
score: 116.1
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 54..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..65

Blast
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BLAST of TCONS_00034881-protein vs. Swiss-Prot (Human)
Match: GLT16 (Polypeptide N-acetylgalactosaminyltransferase 16 OS=Homo sapiens GN=GALNT16 PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 5.068e-69
Identity = 106/195 (54.36%), Postives = 139/195 (71.28%), Query Frame = 0 
Query:   17 SSTFDETSYISKTKLSESEDPYHRHKFNQQISDELDSDRPIPDTRPPQCLEESYDKRLSSTSIIITFHNEARSALLRTIKSVLDRTPPHLLTEIILVDDFSANEKDGASLKDLPKIVLMRNGKREGLIRSRLKGVSVAKSSILTFLDSHCEVNVGWIEPLLAQVEQDPLAIASPVIDIIKTDTLEYKASSNYLKG 211
            S  FDE +Y+S  +L   EDPY +H FNQ  SD+L  DRPI DTR   C   SY   L +TS+IITFHNEARS LLRT+KSVL+RTP +L+ EIILVDDFS++ +D   L  +PK+  +RN +REGLIRSR++G  VA +++LTFLDSHCEVN  W+ P+L +V++D   + SP+ID+I  D   Y A+S  L+G
Sbjct:   65 SKGFDEKAYLSAKQLKAGEDPYRQHAFNQLESDKLSPDRPIRDTRHYSCPSVSYSSDLPATSVIITFHNEARSTLLRTVKSVLNRTPANLIQEIILVDDFSSDPEDCLLLTRIPKVKCLRNDRREGLIRSRVRGADVAAATVLTFLDSHCEVNTEWLPPMLQRVKEDHTRVVSPIIDVISLDNFAYLAASADLRG 259
The following BLAST results are available for this feature:
BLAST of TCONS_00034881-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLT165.068e-6954.36Polypeptide N-acetylgalactosaminyltransferase 16 O... [more]
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