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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00025173-protein ID=TCONS_00025173-protein|Name=TCONS_00025173-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1490bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00025173-protein vs. Swiss-Prot (Human)
Match: MED23 (Mediator of RNA polymerase II transcription subunit 23 OS=Homo sapiens GN=MED23 PE=1 SV=2) HSP 1 Score: 1117.45 bits (2889), Expect = 0.000e+0 Identity = 596/1430 (41.68%), Postives = 873/1430 (61.05%), Query Frame = 0
Query: 11 KSNLRKILSNSLVFQSVGYAFYGHLVEDEEESKDRVGQFITSFTNFWSHLTREQQEDESMIVEFVEFANQQRHHMRISYLYELLTATVQNGIVSARIASEAILSSEYLTLENSLIWKLSFAFVATFLPQMDYKSVRSVYSKLLTKVKNELPESLSNSQIELLQDVKKVVLLGLNRESSILPSYLVINDIYKLYPVSNFQPHWVFGEEFTTFVNTFRPLAQMVSITGHSSLVPVVGHSGS-SNVWNLEPATLKFPLKGPLPYKKNLIKPQKDLLRHVIAQTYSRDMVCSMLGLKKQQRQRCEALEGLLVELIIVAMEKTE------NGESHHLLWQHLSSQLIFFILFQFASFPHMVLALHEKLSKRNLNKGRDHLMWVLLQFISGSIQKGPLSAFSPVMKLFELLYPEKEPIKSVTEVESDSNISFAMACIWVHLSKKAETDN------VPVALRSQIEMLGTTIKQKVEEGSYACPGFEVSLLCNAYSTNQESFQMPLNRLLSRLYGAGQSNTKLGPNGVLVATNTSPLEMKLLDSLTIHAKMSLIQGVVRRIIQIAHAYASQQPQNSIPLTPALVETYSRLLVYNEIELLGIKGFLSQLLPMVLKSKAWGILHTLAEMFSYRLHHIQSHYRVHLLTNLYPLIVVPFTGKHQLYLCIQHAAIRLMMGFENSEIQMHLSTQRYQQEPKLLLSRDCEELNRVFVLNVARAVQT----TSADSLPFAWCEAVLKETIQMTPHRWSSSTLAAFPSSIQRFYAANTNPQLXFPSSIQRFYAANTNPQLMQNKTGKPLHDKVELHYRKLKTFAKEEDMVTYCAETADVHEIFLCIIWKVLNEQNMVTAFCHHVIMRLSHKPLINYLSIFCDYIIHELKSCMGNMGNNQLKRIFSLINDMVWKYDILPLDRFLLSLILRPLEDKEVHFAHLLINYLLIQLQEFKTRVNKFVSENHSQHWDQSNWHEKHKQYHEQFPENFFYEGILKANNMTPAPGSLEYLPTYFGNICLRFIPVFGIIIHRLIETKDLTL-LESLLNEYGQLFKFHDRPITYLYNTLYFYEKQLRDQNHIKKLLASVIINAQSENQPKDWASREFQEYVK-----DTNSIWSPNTQYLSNLIERFVNTILDRNPPQFASCDWRFNEFSNPSSHVLHATCVELMTLPMHGDAIGKSLIEVICKSGNANNSTFLHSDIMSWINATALILTSLPQSYLFTINQCVSDVLQNHLSKFVLTSTTSLPSF----FDFCS---NYS-MNCATYPDFIVALFHATWLHAGVGQFVQLYSFLRDTLKPLIETETQLLYVLCLYGPFIQRFQSENQQHRCLFEICSEFYLIIEQVSRNCQTPLVFVDVMSDFLYHIKYMFVGDNLRGVISNTMDNFHESLQKKLKFM-----VSPATTTPLAASGAASIKMENFGGPQQPLAATMT 1404
++ L+ I + + + AF G ++ E+ K ++ + +F FW L++E E I V+F + Q RIS+LY+ L V+ G++ R+ E++++S+ L E + +W L+F V + +DYK VR + +L K+ +P ++S++ ++ L ++V+ L R + +LP+Y + +I KLYP PHW+ G + FV+TFRP A++ SI G SL+PVV +SG+ N W L+PATL+FPLKG LPY K+L +PQ LLR+V+ Q YSRDMVC+MLGL KQ +QRC LE LV+L++ AME++E +G + LLWQHLSSQLIFF+LFQFASFPHMVL+LH+KL+ R L KGRDHLMWVLLQFISGSIQK L+ F PVMKLF+LLYPEKE I + S +FAM CIW+HL++KA+ DN +P +LR E L +++ K S ++++LLCNAYSTN E F +P+ L+ +YG G L + + + +PL M LLDSLT+HAKMSLI + R+I++AHA ++S+ L PALVETYSRLLVY EIE LGIKGF+SQLLP V KS AWGILHTL EMFSYR+HHIQ HYRV LL++L+ L V T ++QL+LC++ A+RL+ +SE+Q + R+ +PK +LS + EELNR +L +ARA T +DS+ WC+ +L+ + TPH W+S TL+ FP +Q F+ N PQ RF L VE YRK K+ + E D++T+ + +FLC++WK+L E + + + V+ R+ + L+ ++ F D++++E + + G QL + ++NDMVWKY+I+ LDR +L L +R E E + +I LL++ +F+ RV+ FV EN +HW Q++WH KH YH+++PE ++EG+ + + P YLP YFGN+CLRF+PVF I+IHR +E ++ LE+LL+ G L+KFHDRP+TYLYNTL++YE LRD+ +K+ L II + +N+P+ W + Y+K + W P+ Y LI R V+T+ ++P F +CDWRFNEF NP++H LH TCVELM L + G +G +L+ V+ KS +I +W+NA LI+T+LP+ Y ++ + V +S LTS T + FDF + +YS M+C+ + +AL HA W H+ +GQ + FL + L P+++TE QLLYV L GPF+QRFQ E + RC+ EI FY ++ V + C T L ++D + DFLYH+KYMF GD+++ + + N +L+ +L+F+ + PA P A + + N Q P++ +T
Sbjct: 2 ETQLQSIFEEVVKTEVIEEAFPGMFMDTPEDEKTKLISCLGAFRQFWGGLSQESHEQ--CIQWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRLVCESLINSDTLEWERTQLWALTFKLVRKIIGGVDYKGVRDLLKVILEKILT-IPNTVSSAVVQQLLAAREVIAYILERNACLLPAYFAVTEIRKLYPEGKL-PHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNSWKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQHKQRCPVLEDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKEYIPVPDINKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHEFLQQSLRNK----SLQMNDYKIALLCNAYSTNSECFTLPMGALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA------KSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT--RFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWASHTLSCFPGPLQAFFKQNNVPQE------SRFN----------------LKKNVEEEYRKWKSMSNENDIITHFSMQGS-PPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFADFLVYEFST---SAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVD-PPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIGSLKDNRPQGWCLSD--TYLKCAMNAREENPWVPDDTYYCRLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVSGKEVGNALLNVVLKS----QPLVPRENITAWMNAIGLIITALPEPYWIVLHDRIVSV----ISSPSLTSETEWVGYPFRLFDFTACHQSYSEMSCS----YTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEFQLLYVYHLVGPFLQRFQQE--RTRCMIEIGVAFYDMLLNVDQ-CSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICNLKPALKLRLRFITHISKMEPAAVPPQAMNSGSPAPQSN----QVPVSLPVT 1367 The following BLAST results are available for this feature:
BLAST of TCONS_00025173-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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