TCONS_00022985-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022985-protein
Unique NameTCONS_00022985-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length398

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022985-protein ID=TCONS_00022985-protein|Name=TCONS_00022985-protein|organism=Clytia hemisphaerica|type=polypeptide|length=398bp
MLKRNLVPVFKRLLIQTSQSAKKSTFPSYGLEKKWAHYNQAAIIDQAGKP
VRLLTPEKLMFAGKSKDGRHLMKSVRFLQSELPRRIARRVMDFQGLPYVV
AINPNVQHVYELYLRAFHKLSSFPEIKTLEEEKEYSDLIQRLLDDHKDVI
SCLAKAFHEVKHLISYEVLGALTERTIRSRLGIRLLAEHHVALRHQKNDY
IGIICTRTSPKAIIEKCVYNSRRMCEHELGHSPSVFLSGHTKSCFPHFPS
PLEYILQELLKNSMKANILQHKKLNTEKPLPSLEVTICNNSDHFIIKISD
RGGGIPEDRMEEIFRYSESSTPAEDEERFEQGGMLDGLVNAANVTAVGGR
ISGHGFGLPSSRAYTEFLGGNLTLMPMVGLGTDVFLRIAHITSDSIKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012912XLOC_012912Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022985TCONS_00022985Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018955BCDHK/PDK_N
IPR003594HATPase_C
IPR005467His_kinase_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018955Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, N-terminalGENE3D1.20.140.20coord: 54..206
e-value: 4.2E-43
score: 146.4
IPR018955Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, N-terminalPFAMPF10436BCDHK_Adom3coord: 56..205
e-value: 1.3E-35
score: 122.6
IPR018955Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, N-terminalSUPERFAMILY69012alpha-ketoacid dehydrogenase kinase, N-terminal domaincoord: 43..196
IPR003594Histidine kinase-like ATPase, C-terminal domainPFAMPF02518HATPase_ccoord: 250..387
e-value: 1.6E-10
score: 41.4
IPR003594Histidine kinase-like ATPase, C-terminal domainGENE3D3.30.565.10coord: 207..397
e-value: 3.6E-28
score: 97.3
IPR003594Histidine kinase-like ATPase, C-terminal domainSUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 204..388
IPR005467Histidine kinase domainPROSITEPS50109HIS_KINcoord: 252..392
score: 16.382
NoneNo IPR availableCDDcd00075HATPase_ccoord: 252..388
e-value: 1.45244E-14
score: 68.057

Blast
[Close]
BLAST of TCONS_00022985-protein vs. Swiss-Prot (Human)
Match: BCKD ([3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Homo sapiens GN=BCKDK PE=1 SV=2)

HSP 1 Score: 333.954 bits (855), Expect = 4.058e-112
Identity = 172/359 (47.91%), Postives = 240/359 (66.85%), Query Frame = 0 
Query:   38 YNQAAIIDQAGKPVRLLTPEKLMFAGKSKDGRHLMKSVRFLQSELPRRIARRVMDFQGLPYVVAINPNVQHVYELYLRAFHKLSSFPEIKTLEEEKEYSDLIQRLLDDHKDVISCLAKAFHEV-KHLISYEVLGALTERTIRSRLGIRLLAEHHVALRHQKNDYIGIICTRTSPKAIIEKCVYNSRRMCEHELGHSPSVFLSGHTKSCFPHFPSPLEYILQELLKNSMKANILQHKKLNTEKPLPSLEVTICNNSDHFIIKISDRGGGIPEDRMEEIFRY----SESSTPAEDEERFEQGGMLDGLVNAANVTAVGGRISGHGFGLPSSRAYTEFLGGNLTLMPMVGLGTDVFLRIAHI 391
            YNQ+AI   A KP   LTP  +++AG+S+DG HL+KS R+LQ ELP RIA R+  F+ LP+++  NP + HV+ELY+RAF KL+ FP IK   +E +Y  L+++LLDDHKDV++ LA+   E  KH+   +++    ++T+ SRLGIR+LA HH+AL   K D++GIICTR SPK IIEK V  +RR+CEH+ G++P V ++GH  + FP  P PL+YIL ELLKN+M+A +  H  L+T   +P + +TI NN    II+ISDRGGGI    ++ +  Y    +E+ST  +D       G LD      +  A  G + G GFGLP+SRAY E+LGG+L L  + G+GTDV+LR+ HI
Sbjct:   54 YNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKSARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESH--LDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTAEAST--QDPRISPLFGHLD-----MHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHI 403
The following BLAST results are available for this feature:
BLAST of TCONS_00022985-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BCKD4.058e-11247.91[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]... [more]
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