TCONS_00022376-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022376-protein
Unique NameTCONS_00022376-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length421

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022376-protein ID=TCONS_00022376-protein|Name=TCONS_00022376-protein|organism=Clytia hemisphaerica|type=polypeptide|length=421bp
QGSVTALLTKKDETNSKKRYCTDFDLGYVMERNVDELSGGELQRFACAVV
CVQNADVYMFDEPSSYLDVKQRLKAALAIRSLTQENKYIIVVEHDLSVLD
YLSDFICCLYGTPGAYGVVTMPFTVREGINIFLDGFVPTENLRFREESLT
FKVSESAEDEEIKRMRRYSYPDMEKTLKSFHLAVKKGDFTDSEIIVMLGE
NGTGKTTFIRMMAGILKPDNDENVPQLNVSYKPQKISPKSQGTVRMLMHA
KIRDAYIHPQFITDVMKPLKIENIFDQEVQNLSGGELQRVALTLCLGKPA
DVYLIDEPSAYLDSEQRLHAAKVIKRFILHAKKTGFIVEHDFIMATYLAD
RVIVFEGQPSVDTTANSPQSLLTGMNKFLESLEITFRRDPANFRPRINKL
NSVKDAEQKKTGNFFFMDTTD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012553XLOC_012553Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022376TCONS_00022376Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 191..360
e-value: 1.7E-10
score: 50.9
NoneNo IPR availableGENE3D3.40.50.300coord: 163..417
e-value: 1.1E-34
score: 119.6
NoneNo IPR availableGENE3D3.40.50.300coord: 3..162
e-value: 6.2E-22
score: 77.7
NoneNo IPR availableCDDcd03237ABC_RNaseL_inhibitor_domain2coord: 168..412
e-value: 1.71582E-153
score: 436.454
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 188..310
e-value: 2.5E-16
score: 60.3
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 157..382
score: 15.193
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 188..356
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..109

Blast
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BLAST of TCONS_00022376-protein vs. Swiss-Prot (Human)
Match: ABCE1 (ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1 PE=1 SV=1)

HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0
Identity = 318/418 (76.08%), Postives = 364/418 (87.08%), Query Frame = 0 
Query:    1 QGSVTALLTKKDETNSKKRYCTDFDLGYVMERNVDELSGGELQRFACAVVCVQNADVYMFDEPSSYLDVKQRLKAALAIRSLTQENKYIIVVEHDLSVLDYLSDFICCLYGTPGAYGVVTMPFTVREGINIFLDGFVPTENLRFREESLTFKVSESAEDEEIKRMRRYSYPDMEKTLKSFHLAVKKGDFTDSEIIVMLGENGTGKTTFIRMMAGILKPDNDENVPQLNVSYKPQKISPKSQGTVRMLMHAKIRDAYIHPQFITDVMKPLKIENIFDQEVQNLSGGELQRVALTLCLGKPADVYLIDEPSAYLDSEQRLHAAKVIKRFILHAKKTGFIVEHDFIMATYLADRVIVFEGQPSVDTTANSPQSLLTGMNKFLESLEITFRRDPANFRPRINKLNSVKDAEQKKTGNFFFMD 418
            +G+V ++L +KDET ++   C   DL ++ ERNV++LSGGELQRFACAVVC+Q AD++MFDEPSSYLDVKQRLKAA+ IRSL   ++YIIVVEHDLSVLDYLSDFICCLYG P AYGVVTMPF+VREGINIFLDG+VPTENLRFR+ SL FKV+E+A +EE+K+M  Y YP M+K +  F LA+  G+FTDSEI+VMLGENGTGKTTFIRM+AG LKPD    VP LNVSYKPQKISPKS G+VR L+H KIRDAY HPQF+TDVMKPL+IENI DQEVQ LSGGELQRVAL LCLGKPADVYLIDEPSAYLDSEQRL AA+V+KRFILHAKKT F+VEHDFIMATYLADRVIVF+G PS +T ANSPQ+LL GMNKFL  LEITFRRDP N+RPRINKLNS+KD EQKK+GN+FF+D
Sbjct:  181 KGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMFDEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVTMPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEFELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKSTGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPADVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLD 598

HSP 2 Score: 93.9745 bits (232), Expect = 1.263e-20
Identity = 67/218 (30.73%), Postives = 110/218 (50.46%), Query Frame = 0 
Query:  192 SEIIVMLGENGTGKTTFIRMMAGILKPDNDENVPQLNVSYKPQKISPKSQGTVRMLMHAKIRD----AYIHPQFITDVMKPLK--IENIFDQE----------------------VQNLSGGELQRVALTLCLGKPADVYLIDEPSAYLDSEQRLHAAKVIKRFILHAKKTGFIVEHDFIMATYLADRVIVFEGQPSVDTTANSPQSLLTGMNKFLES 381
             E++ ++G NG GK+T ++++AG  KP    N+ + +     Q+I    +G+       KI +    A I PQ++  + K  K  + +I D++                      V++LSGGELQR A  +   + AD+++ DEPS+YLD +QRL AA  I R +++  +   +VEHD  +  YL+D +    G PS       P S+  G+N FL+ 
Sbjct:  103 GEVLGLVGTNGIGKSTALKILAGKQKP----NLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAAKGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMFDEPSSYLDVKQRLKAAITI-RSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVTMPFSVREGINIFLDG 315
The following BLAST results are available for this feature:
BLAST of TCONS_00022376-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCE11.263e-2076.08ATP-binding cassette sub-family E member 1 OS=Homo... [more]
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