TCONS_00022232-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00022232-protein
Unique Name	TCONS_00022232-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1207

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00022232-protein ID=TCONS_00022232-protein|Name=TCONS_00022232-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1207bp
MDLNDNKKVWAPDGRDGFCLGKVVDIGTDAITVELVNGKNVSAPYKRVFA
SEDDNNKDHDDNCALMYLNEATLLNNIKIRYKTDKIYTYVANILIALNPY
HELAGLYSKQSIEIYKGKSLGMLPPHVYAIADKTYRDMKVLKQSQSIIVS
GESGAGKTESTKYILRYLTEAYGHGGVGNIEKRIVEANPLLEAFGNAKTL
RNLNSSRFGKYVEVHFNNKPELAGAFISHYLLEKSRIVRQSAGERNYHVF
YRMCAGAPSDMKSALRLSDAKTFNYLNRGSLSERGIDDVRDFQMLDNAMN
AVGLSTADKSNIYRIAAAVLHLGNINFQESTKDKKGGSELSPASETSAAI
TAKLLGLHQNELAMSLTTRIMMTAKGGGMGTMYKIPLSPAQAAAGRDALA
KSIYSNLFDHIVSCINKCFPFKDSANYIGVLDIAGFEFFEVNSFEQLCIN
YCNEKLQQFFNQRILKEEQALYEKEGLGVKTVNYADNQDCIDLFEMKATG
LFDLLDEEMKFPSPSETHFTTELHSKNNKHFRLAIPRKSPLSIHRSVRDD
QGFLVRHFAGAVCYQTVEFLEKNNDALHDSLEQLVLESSDPFLKSLFPAP
KPQANSKPGGKVKKLAFDSVGKKFRRQLDLLLEKLRSTGSNFIRCIKPND
QMKSRDFEGAQILSQLQCAGMVSVLELMQEGYPSRTAFLDLHTKYKSFLP
PKLAKLDPRTFCNALFRAVGMDNDDFKFGMTKVFFRPGKFAEFDQIMRSD
PQALNALISKVNKWIIRNRWKRATWCALSVQKLANKIKFRREMLVRIQKT
VKMFINVRKHKPRYKGLIKMRTLEVQANQMSSLVSALKKDKDKFNKEVMK
LKENVQKAIQQIKQSMMKQGAIDKLYDALVKDINKQLNSLKSQKAAQEEQ
ERLRKIQEQMEMEKRKREEEEKKRLQEDRQMKERAAKEAKMKKEAADQKR
KAEEEKVQASMEKAKKEEDQKNLEISQREEQEQRDYELALRLAADPQTMV
SDERVQLKRNIATTDAKYEKIRKWTYAELRDVINTSCDLDMLEACRVEYH
RRLKVYHAWRKRNMEKNKNAPKAQRAPVELIRQAELSAATTTFSSKSSKT
NNNAQRYFRVPFSKPTDQYRDREYTKSGWWYAHFDGNYIARQLEIHPNGA
LLLVAGKNDEEICELSLTETRLESRSGAEITVDEFNDVWTSYGGKIEVFK
SKQQQRK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_012461	XLOC_012461	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00022232	TCONS_00022232	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001609	Myosin_head_motor_dom
IPR004009	Myosin_N
IPR032412	Myosin-VI_CBD
IPR027417	P-loop_NTPase

Vocabulary: **Cellular Component**
Term	Definition
GO:0016459	myosin complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003774	motor activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016459	myosin complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003774	motor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 567..587
None	No IPR available	COILS	Coil	Coil	coord: 880..984
None	No IPR available	COILS	Coil	Coil	coord: 834..868
None	No IPR available	GENE3D	3.40.50.300		coord: 132..407 e-value: 0.009 score: 14.8
None	No IPR available	GENE3D	1.20.1000.10		coord: 438..945 e-value: 1.4E-10 score: 40.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 911..980
None	No IPR available	CDD	cd01382	MYSc_Myo6	coord: 71..736 e-value: 0.0 score: 1201.69
IPR001609	Myosin head, motor domain	PRINTS	PR00193	MYOSINHEAVY	coord: 87..106 score: 40.04 coord: 427..455 score: 76.15 coord: 189..216 score: 74.62 coord: 480..508 score: 32.05 coord: 144..169 score: 60.38
IPR001609	Myosin head, motor domain	SMART	SM00242	MYSc_2a	coord: 51..749 e-value: 0.0 score: 1109.0
IPR001609	Myosin head, motor domain	PFAM	PF00063	Myosin_head	coord: 59..736 e-value: 2.4E-239 score: 796.0
IPR001609	Myosin head, motor domain	PROSITE	PS51456	MYOSIN_MOTOR	coord: 57..748 score: 235.616
IPR004009	Myosin, N-terminal, SH3-like	PFAM	PF02736	Myosin_N	coord: 7..42 e-value: 2.8E-7 score: 30.1
IPR032412	Myosin VI, cargo binding domain	PFAM	PF16521	Myosin-VI_CBD	coord: 1105..1194 e-value: 2.3E-33 score: 114.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 32..796

Blast

[Close]

BLAST of TCONS_00022232-protein vs. Swiss-Prot (Human)
Match: MYO6 (Unconventional myosin-VI OS=Homo sapiens GN=MYO6 PE=1 SV=4)

HSP 1 Score: 1301.19 bits (3366), Expect = 0.000e+0
Identity = 666/1276 (52.19%), Postives = 887/1276 (69.51%), Query Frame = 0

Query:    3 LNDNKKVWAPDGRDGFCLGKVVDIGTDAITVELVN--GKNVSAPYKRVFASEDDNNKDHDDNCALMYLNEATLLNNIKIRYKTDKIYTYVANILIALNPYHELAGLYSKQSIEIYKGKSLGMLPPHVYAIADKTYRDMKVLKQSQSIIVSGESGAGKTESTKYILRYLTEAYGHGGVGNIEKRIVEANPLLEAFGNAKTLRNLNSSRFGKYVEVHFNNKPELAGAFISHYLLEKSRIVRQSAGERNYHVFYRMCAGAPSDMKSALRLSDAKTFNYLNRG---------------------------SLSERGIDDVRDFQMLDNAMNAVGLSTADKSNIYRIAAAVLHLGNINFQESTKDKKGGSELSPASETSAAITAKLLGLHQNELAMSLTTRIMMTAKGGGMGTMYKIPLSPAQAAAGRDALAKSIYSNLFDHIVSCINKCFPFKDSANYIGVLDIAGFEFFEVNSFEQLCINYCNEKLQQFFNQRILKEEQALYEKEGLGVKTVNYADNQDCIDLFEMKATGLFDLLDEEMKFPSPSETHFTTELHSKNNKHFRLAIPRKSPLSIHRSVRDDQGFLVRHFAGAVCYQTVEFLEKNNDALHDSLEQLVLESSDPFLKSLFPAPKPQANSKPGGKVKKLAFDSVGKKFRRQLDLLLEKLRSTGSNFIRCIKPNDQMKSRDFEGAQILSQLQCAGMVSVLELMQEGYPSRTAFLDLHTKYKSFLPPKLAKLDPRTFCNALFRAVGMDNDDFKFGMTKVFFRPGKFAEFDQIMRSDPQALNALISKVNKWIIRNRWKRATWCALSVQKLANKIKFRREMLVRIQKTVKMFINVRKHKPRYKGLIKMRTLEVQANQMSSLVSALKKDKDKFNKEVMKLKENVQKAIQQIKQSMMKQGAIDKLYDALVKDINKQLNSLKSQKAAQEEQERLRKIQEQMEMEKRKREEEEKKRLQEDRQMKERAAKEAKMKKEAADQKRKAE-----EEKVQASMEKAKKEEDQKNLEISQREEQEQRDYELALRLAADPQTMVSDER---VQLKRNI--------------------------------------ATTDAKYEKIRKWTYAELRDVINTSCDLDMLEACRVEYHRRLKVYHAW----RKRNMEKNKNAPKAQR----APVELIRQAELSAATTTFSSKSSKTNNNAQRYFRVPFSKPTDQYRDREYTKSGWWYAHFDGNYIARQLEIHPN-GALLLVAGKNDEEICELSLTETRLESRSGAEITVDEFNDVWTSYGG 1194
            + D K VWAP   DGF +G +VDIG D++T+E +N  GK   A   +VF +E+D+ KD +DNC+LMYLNEATLL+NIK+RY  D+IYTYVANILIA+NPY ++  +YS ++I+ Y+GKSLG  PPHV+AIADK +RDMKVLK SQSIIVSGESGAGKTE+TK++LRYLTE+YG G   +I+ RIVEANPLLEAFGNAKT+RN NSSRFGK+VE+HFN K  + G F+SHYLLEKSRI  Q   ERNYH+FYR+CAGA  D++  L LS    F YLNRG                           S+ +  +DD  DF  +  AM  +GL   +K +++R+ A VLHLGNI+F+E+     GG  L   S  S    A+LLGL Q++L +SLTTR+M+T  GG  GT+ K+PL   QA   RDALAK++YS+LFDH+V+ +N+CFPF+ S+ +IGVLDIAGFE+FE NSFEQ CINYCNEKLQQFFN+RILKEEQ LY+KEGLGV  V+Y DNQDCIDL E K  G+ D+LDEE + P PS+ HFT+ +H K+  HFRL IPRKS L++HR++RDD+GF++RHFAGAVCY+T +F+EKNNDALH SLE L+ ES D F++ LF +     N     K  KL+F SVG KF+ QL+LLL+KLRSTG++FIRCIKPN +M S  FEGAQILSQLQC+GMVSVL+LMQ GYPSR +F +L+  YK ++P KLA+LDPR FC ALF+A+G++ +D+KFG+TKVFFRPGKFAEFDQIM+SDP  L  L+ +VN W+  +RWK+  WC+LSV KL NKIK+R E  +++QKT++M++  R+HKPR  GL+K+ TL+ + ++ + +VS LK  K + NK++  L+ ++   + +IK +MM Q  I K YDALVK   + L++L+ +K  +EE ERLR+IQE+ME E+++REE+EK+R +E+ + + +   EAK K+E  ++K++ +     + +V+A + + K+EE Q+   +    EQE+RD ELALR+A     ++SDE    + L+R++                                      A    K   + KW YAELRD INTSCD+++L ACR E+HRRLKVYHAW    +KRN E  + APK+      AP  L    + + A    + +     N  QR+FR+PF +P DQY+D +  K GWWYAHFDG +IARQ+E+HP+   +LLVAGK+D E+CEL+L ET L  + GAEI   +F ++W   GG
Sbjct:    1 MEDGKPVWAPHPTDGFQMGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSEAIKSYQGKSLGTRPPHVFAIADKAFRDMKVLKMSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQ--DIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDIREKLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSMKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAG-STSGGCNLKNKSAQSLEYCAELLGLDQDDLRVSLTTRVMLTTAGGTKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEAKLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLTIPRKSKLAVHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFES-STNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGYPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNENDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWLTCSRWKKVQWCSLSVIKLKNKIKYRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLKKRLDKFNEVVSVLKDGKPEMNKQIKNLEISIDTLMAKIKSTMMTQEQIQKEYDALVKSSEELLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEKRRRKEEEERRMKLEMEAKRKQEEEERKKREDDEKRIQAEVEAQLARQKEEESQQQAVL----EQERRDRELALRIAQSEAELISDEAQADLALRRSLDSYPVSKNDGTRPKMTPEQMAKEMSEFLSRGPAVLATKAAAGTKKYDLSKWKYAELRDTINTSCDIELLAACREEFHRRLKVYHAWKSKNKKRNTETEQRAPKSVTDYDFAPF-LNNSPQQNPAAQIPARQREIEMNRQQRFFRIPFIRPADQYKDPQSKKKGWWYAHFDGPWIARQMELHPDKPPILLVAGKDDMEMCELNLEETGLTRKRGAEILPRQFEEIWERCGG 1267

The following BLAST results are available for this feature:

BLAST of TCONS_00022232-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00022232-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MYO6	0.000e+0	52.19	Unconventional myosin-VI OS=Homo sapiens GN=MYO6 P...	[more]

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TCONS_00022232-protein (polypeptide) - C. hemisphaerica