TCONS_00021095-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00021095-protein
Unique Name	TCONS_00021095-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	339

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00021095-protein ID=TCONS_00021095-protein|Name=TCONS_00021095-protein|organism=Clytia hemisphaerica|type=polypeptide|length=339bp
QPKSLPEIKKMFNKSKSKRNYRSRKQQEQTNEESEETKQTENEDDVDGTE
EGEEEESVLTSLQERKELQSFRKRQTGVSAESLLVGEKVEQKKEGGISDP
FKIKSGGGLTEMSATAKKVTQVSELGTAFSTETNQRDEDVQLLKYIEEGL
KKKRGADEETTSNNEMKLSSKESQLFQVPDNINVKSKIMKSEEMLSSQML
SGIPEVNLGIEAKIKNIEATEEAKMKMIDDSKNKRRESSDFVPTNMASNF
MHHNRFYNEKAIVDKERKKEQKKKELESVTVVDKGPTVGKEIVENDVDTK
FMNKAMNASQNKRKDKPSDTVDDYMFENFKKKAKEGRWR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_011826	XLOC_011826	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00021095	TCONS_00021095	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010756	Hep_59

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 24..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..108
IPR010756	Hepatocellular carcinoma-associated antigen 59	PFAM	PF07052	Hep_59	coord: 129..227 e-value: 5.3E-27 score: 94.6

Blast

[Close]

BLAST of TCONS_00021095-protein vs. Swiss-Prot (Human)
Match: CI078 (Uncharacterized protein C9orf78 OS=Homo sapiens GN=C9orf78 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.495e-58
Identity = 116/280 (41.43%), Postives = 171/280 (61.07%), Query Frame = 0

Query:   58 VLTSLQERKELQSFRKRQTGVSAESLLVGEKVEQKKEGGISDPFKIKSGGGLTEMSATAKKVTQVSE-----LGTAFSTETNQRDEDVQLLKYIEEGLKKKRGADEETTSNNEMKLSSKESQLFQVPDNINVKSKIMKSEEMLSSQMLSGIPEVNLGIEAKIKNIEATEEAKMKMIDDSKNKRRES-SDFVPTNMASNFMHHNRFYNEKAIVDKERKKEQKKKELESVTVVDKGPTVGKEIVENDVDTKFMNKAMNASQNKRKDKPSDTVDDYMFENFKK 331
            V   L+E +E+Q+ RKR  GVSA +LLVGEKV Q++   + DPF++K+GG +       +   ++SE     LGT+FS ETN+RDED  ++KYIE  LKK++G  E      ++K  + E  L+++P+NI V S   K+EEMLS+QMLSGIPEV+LGI+AKIKNI +TE+AK +++ + +NK+++S + FVPTNMA N++ HNRFY+E+      R KE+ K     V   +K                   +   +  N+++       DDY +E FKK
Sbjct:   27 VRLKLEETREVQNLRKRPNGVSAVALLVGEKV-QEETTLVDDPFQMKTGGMVDMKKLKERGKDKISEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKGIVEH--EEQKVKPKNAEDCLYELPENIRVSS-AKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKKKDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKP------------------EPERSPPNRKRPANEKATDDYHYEKFKK 284

The following BLAST results are available for this feature:

BLAST of TCONS_00021095-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00021095-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CI078	7.495e-58	41.43	Uncharacterized protein C9orf78 OS=Homo sapiens GN...	[more]

You are here

TCONS_00021095-protein (polypeptide) - C. hemisphaerica