TCONS_00021095 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021095
Unique NameTCONS_00021095
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1879

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021095 ID=TCONS_00021095|Name=TCONS_00021095|organism=Clytia hemisphaerica|type=transcript|length=1879bp
cagccaaaaagtttaccagaaataaaaaaaatgtttaataaatctaaatc
aaaaagaaattatcGATCACGGAAACAACAAGAGCAAACAAATGAAGAAT
CTGAAGAAACTAAACAGACCGAAAATGAAGATGATGTTGATGGGACAGAA
GAAggggaagaagaagaaagtgtTTTAACTTCATTACAAGAACGCAAAGA
ACTGCAAAGTTTTCGGAAAAGACAAACAGGTGTTAGTGCCGAATCGCTAC
TTGTAGGTGAAAAAGTTGAACAGAAAAAAGAAGGAGGTATCTCTGAtcct
tttaaaatcaaatcagGCGGAGGACTAACCGAGATGTCGGCAACAGCTAA
AAAAGTGACACAAGTTTCAGAGCTAGGTACAGCGTTTTCAACTGAAACTA
ATCAGAGAGACGAGGATGttcaattgttgaaatatattgaagaAGGTTTG
AAGAAGAAACGTGGTGCTGatgaagaaacaacatcaaataatgaaatgaa
GCTGTCATCTAAGGAGAGTCAACTATTCCAAGTACCAGACAACATCAATG
TCAAATCAAAGATCATGAAATCTGAAGAAATGTTATCAAGTCAAATGTTA
TCTGGTATTCCAGAAGTTAATCTAGGAATCGAAGCGAAAATCAAGAATAT
TGAAGCAACAGAAGAAGCCAAAATGAAGATGATTGATGACAGTAAAAACA
AACGGCGTGAAAGCTCAGATTTCGTGCCTACTAACATGGCATCAAACTTT
ATGCACCACAATCGGTTTTATAACGAGAAAGCTATTGTTGATAAGGAGCG
AAAGAAagagcaaaagaaaaaagaattagaAAGCGTAACTGTTGTTGATA
AAGGACCAACCGTTGGTAAAGAAATTGTTGAGAATGATGTCGATACTAAG
TTTATGAACAAAGCAATGAATGCAAGTCAAAATAAAAGGAAAGATAAACC
TTCAGATACTGTCGATGATTATATgtttgaaaactttaaaaagaaagCGA
AAGAAGGCCGTTGGAGGTGATGTTTGAGTTCGGAATGGAACGATCTGTCT
ATGACTTGGAGAATGAGGGATGGATCAGGATTTTCATTACTTTAGGTGTG
TGAACTTTCACGAGGttgaaaaatcgcgaaatttacgatATGTTTTGTTT
GCGAATTTGAGGATGAAAAGGGAAAAATTTTTAATGTagatattttttag
cttttttaatGTACAAGATATAGAATCAGTTAATGATTCTTAGACAAACT
TTATTCATGAAAACGTATTTATTAATAACaactacagtatgtggccccca
aaacgtcgatcaaatttaaaacttctctcaaatctagaggaagagaggtt
ttacaaaaatttttgctgcatgaaaaactttaacatctctactttatttt
ccggaagttctttttcaaaattttcaatttcaaaaatatttttcaatcgc
ttaaagataggtagcttttttctaagggccaccaaaacggaggtttgcaa
ttttagctatttctcgagatatctttaagatatgaatacaaaattttgac
catagtttggaaatgtgatttagagggttttgggcataattttttttgat
aaaacttttacagtatacccctggttgtcaaaatacaggtttggggcccc
caaaacggaggtgtagttaaaatcaaattattaagcccagtggtaaaagg
gggagaaactatgaacatatttgtgttttccattaaatttacgacccgat
gcatgtaaaatttatgatttttataaaatatttcaagatttttgatgata
caaagtccaaactgaaaatttagaaattttcaaaatgacaattttgattt
aacaacgtcttaatcaagtttctgaaaac
Run BLAST on NCBI

protein sequence of TCONS_00021095-protein

>TCONS_00021095-protein ID=TCONS_00021095-protein|Name=TCONS_00021095-protein|organism=Clytia hemisphaerica|type=polypeptide|length=339bp
QPKSLPEIKKMFNKSKSKRNYRSRKQQEQTNEESEETKQTENEDDVDGTE
EGEEEESVLTSLQERKELQSFRKRQTGVSAESLLVGEKVEQKKEGGISDP
FKIKSGGGLTEMSATAKKVTQVSELGTAFSTETNQRDEDVQLLKYIEEGL
KKKRGADEETTSNNEMKLSSKESQLFQVPDNINVKSKIMKSEEMLSSQML
SGIPEVNLGIEAKIKNIEATEEAKMKMIDDSKNKRRESSDFVPTNMASNF
MHHNRFYNEKAIVDKERKKEQKKKELESVTVVDKGPTVGKEIVENDVDTK
FMNKAMNASQNKRKDKPSDTVDDYMFENFKKKAKEGRWR
Run BLAST on NCBI

transcript from alignment at sc0000378:135691..139766+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021095 ID=TCONS_00021095|Name=TCONS_00021095|organism=Clytia hemisphaerica|type=transcript|length=4076bp|location=Sequence derived from alignment at sc0000378:135691..139766+ (Clytia hemisphaerica)
cagccaaaaagtttaccagaaataaaaaaaatgtttaataaatctaaatc aaaaagaaattatcGATCACGGAAACAACAAGAGCAAACAAATGAAGAAT CTGAAGAAACTAAACAGACCGAAAATGAAGATGATGTTGATGGGACAGAA GAAggggaagaagaagaaagtgtTTTAACTTCATTACAAGAACGCAAAGA ACTGCAAAGTTTTCGGAAAAGACAAACAGGTGTTAGTGCCGAATCGCTAC TTGTAGGTGAAAAAGTTGAACAGAAAAAAGAAGGAGGTATCTCTGAtcct tttaaaatcaaatcagGCGGAGGACTAACCGAGATGTCGGCAACAGCTAA AAAAGTGACACAAGTTTCAGAGCTAGGTACAGCGTTTTCAACTGAAACTA ATCAGAGAGACGAGGATGttcaattgttgaaatatattgaagaAGGTTTG AAGAAGAAACGTGGTGCTGatgaagaaacaacatcaaataatgaaatgaa GTGAGTTTTCATGTTTTCGTAACGTAACACTGTTCTTAATTATAATCTTA AAGCATATCTTAGCTCAGAATTTTGTATTAGAATGACTCTTATAatcttt taagtttttaagcGAACTAACTCAGATGcttaatttcaaaaaagaaatgt aaTCCTTAGAAGGaatgaattcttccttttaggTTCTTTGATTTGCACTG CTCTTTGATTTGCACTGCTCTTTGATTTGCACTGCTCTTTGATTTGCACT GCTCTTCCTTCAAATATAGTTTGCTTTTTATTATATTCGAACCTTTATCT CTAAACAAGCTTTCCCTTTCAAACAAACTCTATAAACCAGTCTCCATTGA ACAAACTACGCTAACTCCGTTAGTGTTAGAGTCATGAAGACTCTTGTTTT TCCTCTTCTTAAAAGTTGTATTGTGTTGTTGGCAGACTTTTTCAACTAGA ATTTTATTTCAGGTCATAGGGGGTAACACAGTTACTCGGAAATAATAGGT TTAACTTTGAACATGATCTCATAGATTCACTGCTTTCCTCCCGATCTGAT TAAGACACAGTTCACCTccattagcctatttcatagaaTTCATACATCTG TTACATGCTAAAATTTTCTATTAAATTTTAAATGGGGGAAGTGCATAAAT CTGTCCCTTCATCATTCAATTGACTTGGGAATTAGAGAACTTTTTCCATT GTTGTTGCTTTTGTAAAACTTATAATCTCAATTTGGAAAAGAGTGCTtat aggttttgtttttaagtaagagtgatatcgtttgcttattcatcattttt aattcacaagctttttcacattggattgacacggatgtggagcaagattg gtctaaaagaagaaaataacaatagacagacactgtcctgatatgaaata tgtgcctgatatgaaacggggacactatgtaaaaataaaacctttaatca tAAAAACTGCAGTGATGTAGAAAAATATGTTCTaaaaacacgaatcctat gaaataggctaatatCACTGGTGGTAAGttgtggaaatatcatatttatg atatgcatcattgtcttctgacattacatcacggacccaatagctcattg gttgtgttattgtaagtgacgtaaaatcagtcaatacgtcactttcaacc aatcagctgttgggtccgtggaaggcattgtaatggtgcatatcatgaat actcaTTACGCGTGGTTACTTCAATTTCTCAGGCTGTCATCTAAGGAGAG TCAACTATTCCAAGTACCAGACAACATNGTGGTTACTTCGATTTCTCAGG ATGTCATCTAAGGAGAGTCAACTATTCCAAGTACCAGACAACATCAATGT CAAATCAAAGATCATGAAATCTGAAGAAATGTTATCAAGTCAAATGTTAT CTGGTATTCCAGAAGTTAATCTAGGTAAGATTTGGTTCCTCTAATGAAAT TATGGAGTTGTATATTAAGATCTATACAAACCATGAAAAATATCCACCAC ATACAATGAATGATTAAGAGAATTGAAATACGCTACCTTAAGAGAATCAA AAATCGTAATAGATAAATTTGGTGAGAGACTATTTTGttgaataatgttt tttttgattttagcaagaATTAATTTCATTGATGGTAGGGTAAATTATTC CTCTTCTTCCTAAAGATGAGCCTTTTCaacaaaatatgtttttttaagaa aattatgaaaaagtgaCAGGTTATTCTAGCTAGGCAATAATTTATActaa ttttgacaaatattatcaaaatgaGTTCTTACCATATGAAGTTCTCTTGC GGCATGATATTCAGggatacccggggggggggggactagggttgGCAGAt gaggggtactagggttgacAGATGACGGGTAACTGCGGATGGGACCTCCG AAGACCGagccttagagagactgatttttctgaaaaggtgGCCGTTAggg agacttttttgaaaaattcttttctacaattttttcactttaaatcaaaa aaaattcctaaaaatcgtgaatttttgagagactttgaagggtgaaaaag ccgacccttaccgtctgcacatacacagcacccatttttgcctaagtacc cccctctCCCTGGGAGGGATATAATAAAAACGTTAATTAGTGGTAGTGAT TGATAGTGTAGATAACAAGCGTCCGAGATTAAATTCGAACAATTATCAAA GTGGTATTTGAGGTCAAATGAAGGCCTCAGGTTTAGATTTAGATATAGAC CCTTCATTTACAATACTCATCAAAATTTCGTCTACCATTATAAAGaattt tattatgtttttttatgacCAGGAATCGAAGCGAAAATCAAGAATATTGA AGCAACAGAAGAAGCCAAAATGAAGATGATTGATGACAGTAAAAACAAAC GGCGTGAAAGCTCAGATTTCGTGCCTACTAACATGGCATCAAACTTTATG CACCACAATCGGTTTTATAACGAGAAAGCTATTGTTGATAAGGAGCGAAA GAAagagcaaaagaaaaaagaattagaAAGCGTAACTGTTGTTGATAAAG GACCAACCGTTGGTAAAGAAATTGTTGAGAATGATGTCGATACTAAGTTT ATGAACAAAGCAATGAATGCAAGTCAAAATAAAAGGAAAGATAAACCTTC AGATACTGTCGATGATTATATgtttgaaaactttaaaaagaaagCGAAAG AAGGCCGTTGGAGGTGATGTTTGAGTTCGGAATGGAACGATCTGTCTATG ACTTGGAGAATGAGGGATGGATCAGGATTTTCATTACTTTAGGTGTGTGA ACTTTCACGAGGttgaaaaatcgcgaaatttacgatATGTTTTGTTTGCG AATTTGAGGATGAAAAGGGAAAAATTTTTAATGTagatattttttagctt ttttaatGTACAAGATATAGAATCAGTTAATGATTCTTAGACAAACTTTA TTCATGAAAACGTATTTATTAATAACaactacagtatgtggcccccaaaa cgtcgatcaaatttaaaacttctctcaaatctagaggaagagaggtttta caaaaatttttgctgcatgaaaaactttaacatctctactttattttccg gaagttctttttcaaaattttcaatttcaaaaatatttttcaatcgctta aagataggtagcttttttctaagggccaccaaaacggaggtttgcaattt tagctatttctcgagatatctttaagatatgaatacaaaattttgaccat agtttggaaatgtgatttagagggttttgggcataattttttttgataaa acttttacagtatacccctggttgtcaaaatacaggtttggggcccccaa aacggaggtgtagttaaaatcaaattattaagcccagtggtaaaaggggg agaaactatgaacatatttgtgttttccattaaatttacgacccgatgca tgtaaaatttatgatttttataaaatatttcaagatttttgatgatacaa agtccaaactgaaaatttagaaattttcaaaatgacaattttgatttaac aacgtcttaatcaagtttctgaaaac

Coding sequence (CDS) from alignment at sc0000378:135691..139766+

>TCONS_00021095 ID=TCONS_00021095|Name=TCONS_00021095|organism=Clytia hemisphaerica|type=CDS|length=4080bp|location=Sequence derived from alignment at sc0000378:135691..139766+ (Clytia hemisphaerica)
cagccaaaaagtttaccagaaataaaaaaaatgtttaataaatctaaatc
aaaaagaaattatcGATCACGGAAACAACAAGAGCAAACAAATGAAGAAT
CTGAAGAAACTAAACAGACCGAAAATGAAGATGATGTTGATGGGACAGAA
GAAggggaagaagaagaaagtgtTTTAACTTCATTACAAGAACGCAAAGA
ACTGCAAAGTTTTCGGAAAAGACAAACAGGTGTTAGTGCCGAATCGCTAC
TTGTAGGTGAAAAAGTTGAACAGAAAAAAGAAGGAGGTATCTCTGAtcct
tttaaaatcaaatcagGCGGAGGACTAACCGAGATGTCGGCAACAGCTAA
AAAAGTGACACAAGTTTCAGAGCTAGGTACAGCGTTTTCAACTGAAACTA
ATCAGAGAGACGAGGATGttcaattgttgaaatatattgaagaAGGTTTG
AAGAAGAAACGTGGTGCTGatgaagaaacaacatcaaataatgaaatgaa
GCTGTCATCTAAGGAGAGTCAACTATTCCAAGTACCAGACAACATCAATG
TCAAATCAAAGATCATGAAATCTGAAGAAATGTTATCAAGTCAAATGTTA
TCTGGTATTCCAGAAGTTAATCTAGGAATCGAAGCGAAAATCAAGAATAT
TGAAGCAACAGAAGAAGCCAAAATGAAGATGATTGATGACAGTAAAAACA
AACGGCGTGAAAGCTCAGATTTCGTGCCTACTAACATGGCATCAAACTTT
ATGCACCACAATCGGTTTTATAACGAGAAAGCTATTGTTGATAAGGAGCG
AAAGAAagagcaaaagaaaaaagaattagaAAGCGTAACTGTTGTTGATA
AAGGACCAACCGTTGGTAAAGAAATTGTTGAGAATGATGTCGATACTAAG
TTTATGAACAAAGCAATGAATGCAAGTCAAAATAAAAGGAAAGATAAACC
TTCAGATACTGTCGATGATTATATgtttgaaaactttaaaaagaaagCGA
AAGAAGGCCGTTGGAGGTGAcagccaaaaagtttaccagaaataaaaaaa
atgtttaataaatctaaatcaaaaagaaattatcGATCACGGAAACAACA
AGAGCAAACAAATGAAGAATCTGAAGAAACTAAACAGACCGAAAATGAAG
ATGATGTTGATGGGACAGAAGAAggggaagaagaagaaagtgtTTTAACT
TCATTACAAGAACGCAAAGAACTGCAAAGTTTTCGGAAAAGACAAACAGG
TGTTAGTGCCGAATCGCTACTTGTAGGTGAAAAAGTTGAACAGAAAAAAG
AAGGAGGTATCTCTGAtccttttaaaatcaaatcagGCGGAGGACTAACC
GAGATGTCGGCAACAGCTAAAAAAGTGACACAAGTTTCAGAGCTAGGTAC
AGCGTTTTCAACTGAAACTAATCAGAGAGACGAGGATGttcaattgttga
aatatattgaagaAGGTTTGAAGAAGAAACGTGGTGCTGatgaagaaaca
acatcaaataatgaaatgaaGCTGTCATCTAAGGAGAGTCAACTATTCCA
AGTACCAGACAACATCAATGTCAAATCAAAGATCATGAAATCTGAAGAAA
TGTTATCAAGTCAAATGTTATCTGGTATTCCAGAAGTTAATCTAGGAATC
GAAGCGAAAATCAAGAATATTGAAGCAACAGAAGAAGCCAAAATGAAGAT
GATTGATGACAGTAAAAACAAACGGCGTGAAAGCTCAGATTTCGTGCCTA
CTAACATGGCATCAAACTTTATGCACCACAATCGGTTTTATAACGAGAAA
GCTATTGTTGATAAGGAGCGAAAGAAagagcaaaagaaaaaagaattaga
AAGCGTAACTGTTGTTGATAAAGGACCAACCGTTGGTAAAGAAATTGTTG
AGAATGATGTCGATACTAAGTTTATGAACAAAGCAATGAATGCAAGTCAA
AATAAAAGGAAAGATAAACCTTCAGATACTGTCGATGATTATATgtttga
aaactttaaaaagaaagCGAAAGAAGGCCGTTGGAGGTGAcagccaaaaa
gtttaccagaaataaaaaaaatgtttaataaatctaaatcaaaaagaaat
tatcGATCACGGAAACAACAAGAGCAAACAAATGAAGAATCTGAAGAAAC
TAAACAGACCGAAAATGAAGATGATGTTGATGGGACAGAAGAAggggaag
aagaagaaagtgtTTTAACTTCATTACAAGAACGCAAAGAACTGCAAAGT
TTTCGGAAAAGACAAACAGGTGTTAGTGCCGAATCGCTACTTGTAGGTGA
AAAAGTTGAACAGAAAAAAGAAGGAGGTATCTCTGAtccttttaaaatca
aatcagGCGGAGGACTAACCGAGATGTCGGCAACAGCTAAAAAAGTGACA
CAAGTTTCAGAGCTAGGTACAGCGTTTTCAACTGAAACTAATCAGAGAGA
CGAGGATGttcaattgttgaaatatattgaagaAGGTTTGAAGAAGAAAC
GTGGTGCTGatgaagaaacaacatcaaataatgaaatgaaGCTGTCATCT
AAGGAGAGTCAACTATTCCAAGTACCAGACAACATCAATGTCAAATCAAA
GATCATGAAATCTGAAGAAATGTTATCAAGTCAAATGTTATCTGGTATTC
CAGAAGTTAATCTAGGAATCGAAGCGAAAATCAAGAATATTGAAGCAACA
GAAGAAGCCAAAATGAAGATGATTGATGACAGTAAAAACAAACGGCGTGA
AAGCTCAGATTTCGTGCCTACTAACATGGCATCAAACTTTATGCACCACA
ATCGGTTTTATAACGAGAAAGCTATTGTTGATAAGGAGCGAAAGAAagag
caaaagaaaaaagaattagaAAGCGTAACTGTTGTTGATAAAGGACCAAC
CGTTGGTAAAGAAATTGTTGAGAATGATGTCGATACTAAGTTTATGAACA
AAGCAATGAATGCAAGTCAAAATAAAAGGAAAGATAAACCTTCAGATACT
GTCGATGATTATATgtttgaaaactttaaaaagaaagCGAAAGAAGGCCG
TTGGAGGTGAcagccaaaaagtttaccagaaataaaaaaaatgtttaata
aatctaaatcaaaaagaaattatcGATCACGGAAACAACAAGAGCAAACA
AATGAAGAATCTGAAGAAACTAAACAGACCGAAAATGAAGATGATGTTGA
TGGGACAGAAGAAggggaagaagaagaaagtgtTTTAACTTCATTACAAG
AACGCAAAGAACTGCAAAGTTTTCGGAAAAGACAAACAGGTGTTAGTGCC
GAATCGCTACTTGTAGGTGAAAAAGTTGAACAGAAAAAAGAAGGAGGTAT
CTCTGAtccttttaaaatcaaatcagGCGGAGGACTAACCGAGATGTCGG
CAACAGCTAAAAAAGTGACACAAGTTTCAGAGCTAGGTACAGCGTTTTCA
ACTGAAACTAATCAGAGAGACGAGGATGttcaattgttgaaatatattga
agaAGGTTTGAAGAAGAAACGTGGTGCTGatgaagaaacaacatcaaata
atgaaatgaaGCTGTCATCTAAGGAGAGTCAACTATTCCAAGTACCAGAC
AACATCAATGTCAAATCAAAGATCATGAAATCTGAAGAAATGTTATCAAG
TCAAATGTTATCTGGTATTCCAGAAGTTAATCTAGGAATCGAAGCGAAAA
TCAAGAATATTGAAGCAACAGAAGAAGCCAAAATGAAGATGATTGATGAC
AGTAAAAACAAACGGCGTGAAAGCTCAGATTTCGTGCCTACTAACATGGC
ATCAAACTTTATGCACCACAATCGGTTTTATAACGAGAAAGCTATTGTTG
ATAAGGAGCGAAAGAAagagcaaaagaaaaaagaattagaAAGCGTAACT
GTTGTTGATAAAGGACCAACCGTTGGTAAAGAAATTGTTGAGAATGATGT
CGATACTAAGTTTATGAACAAAGCAATGAATGCAAGTCAAAATAAAAGGA
AAGATAAACCTTCAGATACTGTCGATGATTATATgtttgaaaactttaaa
aagaaagCGAAAGAAGGCCGTTGGAGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011826XLOC_011826Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021095-exon-sc0000378-1491911889:135691..136190TCONS_00021095-exon-sc0000378-1491911889:135691..136190Clytia hemisphaericaexon
TCONS_00021095-exon-sc0000378-1510915933:135691..136190TCONS_00021095-exon-sc0000378-1510915933:135691..136190Clytia hemisphaericaexon
TCONS_00021095-exon-sc0000378-1575043694:135691..136190TCONS_00021095-exon-sc0000378-1575043694:135691..136190Clytia hemisphaericaexon
TCONS_00021095-exon-sc0000378-1491911889:137423..137465TCONS_00021095-exon-sc0000378-1491911889:137423..137465Clytia hemisphaericaexon
TCONS_00021095-exon-sc0000378-1510915933:137423..137465TCONS_00021095-exon-sc0000378-1510915933:137423..137465Clytia hemisphaericaexon
TCONS_00021095-exon-sc0000378-1575043694:137423..137465TCONS_00021095-exon-sc0000378-1575043694:137423..137465Clytia hemisphaericaexon
TCONS_00021095-exon-sc0000378-1491911889:137533..137614TCONS_00021095-exon-sc0000378-1491911889:137533..137614Clytia hemisphaericaexon
TCONS_00021095-exon-sc0000378-1510915933:137533..137614TCONS_00021095-exon-sc0000378-1510915933:137533..137614Clytia hemisphaericaexon
TCONS_00021095-exon-sc0000378-1575043694:137533..137614TCONS_00021095-exon-sc0000378-1575043694:137533..137614Clytia hemisphaericaexon
TCONS_00021095-exon-sc0000378-1491911889:138513..139766TCONS_00021095-exon-sc0000378-1491911889:138513..139766Clytia hemisphaericaexon
TCONS_00021095-exon-sc0000378-1510915933:138513..139766TCONS_00021095-exon-sc0000378-1510915933:138513..139766Clytia hemisphaericaexon
TCONS_00021095-exon-sc0000378-1575043694:138513..139766TCONS_00021095-exon-sc0000378-1575043694:138513..139766Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021095-proteinTCONS_00021095-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000378supercontigsc0000378:135691..139766 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.3994 18.4102 14.7714 12.555 23.8391 17.3616 16.0484 15.2199 12.1566 8.66654 6.77347 6.97272 6.09605 3.29102 9.37522 8.73098 11.886 10.7066 4.9007 5.75755 10.2019 10.1245 20.7999 19.5456 4.81617 7.90653 11.3482 8.50061 15.3772 14.6094
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR010756Hep_59
Blast
BLAST of TCONS_00021095 vs. Swiss-Prot (Human)
Match: CI078 (Uncharacterized protein C9orf78 OS=Homo sapiens GN=C9orf78 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 9.971e-52
Identity = 100/203 (49.26%), Postives = 146/203 (71.92%), Query Frame = 1
Query:  187 QERKELQSFRKRQTGVSAESLLVGEKVEQKKEGGISDPFKIKSGGGLTEMSATAKKVTQVSE-----LGTAFSTETNQRDEDVQLLKYIEEGLKKKRGADEETTSNNEMKLSSKESQLFQVPDNINVKSKIMKSEEMLSSQMLSGIPEVNLGIEAKIKNIEATEEAKMKMIDDSKNKRRES-SDFVPTNMASNFMHHNRFYNE 777
            +E +E+Q+ RKR  GVSA +LLVGEKV Q++   + DPF++K+GG +       +   ++SE     LGT+FS ETN+RDED  ++KYIE  LKK++G  E      ++K  + E  L+++P+NI V S   K+EEMLS+QMLSGIPEV+LGI+AKIKNI +TE+AK +++ + +NK+++S + FVPTNMA N++ HNRFY+E
Sbjct:   32 EETREVQNLRKRPNGVSAVALLVGEKV-QEETTLVDDPFQMKTGGMVDMKKLKERGKDKISEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKGIVEH--EEQKVKPKNAEDCLYELPENIRVSS-AKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKKKDSETSFVPTNMAVNYVQHNRFYHE 230          
The following BLAST results are available for this feature:
BLAST of TCONS_00021095 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CI0789.971e-5249.26Uncharacterized protein C9orf78 OS=Homo sapiens GN... [more]
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