TCONS_00020313-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020313-protein
Unique NameTCONS_00020313-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length375

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020313-protein ID=TCONS_00020313-protein|Name=TCONS_00020313-protein|organism=Clytia hemisphaerica|type=polypeptide|length=375bp
MDMYKGLNQAVLDKYMELDTRGLIQLNYIWIDGTGETMRSKTRTVDWDPV
NVDQLPIWNFDGSSTGQAQGSNSDTYLHPVAIFADPFRRGKHKLILCETY
TYDHKPTKTNKRKICQYVMEQAKDEKPWFGMEQEYTLLDRDGHPLGWPKH
GYPGPQGPYYCSVGTGRVFGREVMEAHYRACMYAGVKISGENAEVMPAQW
EFQVGPCEGIEMGDHLWMARYLLERVSEDFGIRVSLDPKPMPGDWNGAGC
HCNYSTEEMRKEGGITHIYTAIEKLGKRHDYHIEMYDPRGGLDNRRRLTG
RHETSSIHDFSHGVAHRGSSIRVPRQCAEDGYGYFEDRRPSSNCDPYSVT
EALVRTTILNEADTSSEGKAATVTK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011400XLOC_011400Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020313TCONS_00020313Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008146Gln_synth_cat_dom
IPR008147Gln_synt_b-grasp
IPR014746Gln_synth/guanido_kin_cat_dom
IPR027302Gln_synth_N_conserv_site
IPR027303Gln_synth_gly_rich_site
Vocabulary: Molecular Function
TermDefinition
GO:0004356glutamate-ammonia ligase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
GO:0006542glutamine biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006542 glutamine biosynthetic process
biological_process GO:0006807 nitrogen compound metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004356 glutamate-ammonia ligase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008146Glutamine synthetase, catalytic domainSMARTSM01230Gln_synt_C_2coord: 108..357
e-value: 1.6E-67
score: 240.3
IPR008146Glutamine synthetase, catalytic domainPFAMPF00120Gln-synt_Ccoord: 118..256
e-value: 1.2E-12
score: 47.4
IPR008147Glutamine synthetase, beta-Grasp domainPFAMPF03951Gln-synt_Ncoord: 26..101
e-value: 2.1E-13
score: 49.7
IPR008147Glutamine synthetase, beta-Grasp domainSUPERFAMILY54368Glutamine synthetase, N-terminal domaincoord: 19..107
IPR014746Glutamine synthetase/guanido kinase, catalytic domainGENE3D3.30.590.10coord: 98..370
e-value: 1.3E-74
score: 250.8
IPR027302Glutamine synthetase, N-terminal conserved sitePROSITEPS00180GLNA_1coord: 60..77
IPR027303Glutamine synthetase, glycine-rich sitePROSITEPS00181GLNA_ATPcoord: 239..255
NoneNo IPR availableSUPERFAMILY55931Glutamine synthetase/guanido kinasecoord: 109..360

Blast
[Close]
BLAST of TCONS_00020313-protein vs. Swiss-Prot (Human)
Match: GLNA (Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 SV=4)

HSP 1 Score: 513.072 bits (1320), Expect = 0.000e+0
Identity = 226/355 (63.66%), Postives = 283/355 (79.72%), Query Frame = 0 
Query:    7 LNQAVLDKYMELDTRGLIQLNYIWIDGTGETMRSKTRTVDWDPVNVDQLPIWNFDGSSTGQAQGSNSDTYLHPVAIFADPFRRGKHKLILCETYTYDHKPTKTNKRKICQYVMEQAKDEKPWFGMEQEYTLLDRDGHPLGWPKHGYPGPQGPYYCSVGTGRVFGREVMEAHYRACMYAGVKISGENAEVMPAQWEFQVGPCEGIEMGDHLWMARYLLERVSEDFGIRVSLDPKPMPGDWNGAGCHCNYSTEEMRKEGGITHIYTAIEKLGKRHDYHIEMYDPRGGLDNRRRLTGRHETSSIHDFSHGVAHRGSSIRVPRQCAEDGYGYFEDRRPSSNCDPYSVTEALVRTTILNE 361
            LN+ +   YM L     +Q  YIWIDGTGE +R KTRT+D +P  V++LP WNFDGSST Q++GSNSD YL P A+F DPFR+  +KL+LCE + Y+ +P +TN R  C+ +M+   ++ PWFGMEQEYTL+  DGHP GWP +G+PGPQGPYYC VG  R +GR+++EAHYRAC+YAGVKI+G NAEVMPAQWEFQ+GPCEGI MGDHLW+AR++L RV EDFG+  + DPKP+PG+WNGAGCH N+ST+ MR+E G+ +I  AIEKL KRH YHI  YDP+GGLDN RRLTG HETS+I+DFS GVA+R +SIR+PR   ++  GYFEDRRPS+NCDP+SVTEAL+RT +LNE
Sbjct:    9 LNKGIKQVYMSLPQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 363
The following BLAST results are available for this feature:
BLAST of TCONS_00020313-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLNA0.000e+063.66Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 ... [more]
back to top