TCONS_00020220-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020220-protein
Unique NameTCONS_00020220-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length756

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020220-protein ID=TCONS_00020220-protein|Name=TCONS_00020220-protein|organism=Clytia hemisphaerica|type=polypeptide|length=756bp
MAVVYDVSYLEREIDTKGPMLLEEIERANRLARSSLRRKSVEEDEVLRSE
HAALPKDQKTEGFENAKGIKKEKVNHVKEEPEEADFPGVEPSSITRYHSE
DEYSYRDEPRITKGHHTSKDSTHDERKYRSRYQEESVDTEYEEKTYYAKY
CRDQNVNPTLIQAATPIVHIPKSRNEERFPYDEEIKAEPHSPPLPQKRRR
RSHDDEDVYSGGEFLEAERADQIQYPIEDKKMDGIYEGDLADGAGEELVL
VEESKPDIAGTLDSVSLKYTTNGDKCTLGEVAERVMEINVDDPYDLCSLL
ATEKQESADDCASGRGGSRRKLYQGSGMMEPISRRSKXADDCASGRGGSR
RKLYQGSGMMEPISRRSKSFVSTMLPKGKDGRTRMNLCRYPYKCSRCDSW
FEDDVELKVHMSTHKEKSFKSVKDFIHEKIFRKPEESKTNTPLYVEPPKE
VLVRVEPPNHHSPREIIVPYLPPHHIIPAHGAPMETIYYPHPPTTTCDLC
NLHFRSHNDLLVHLQQEHKMPPVANGNGESATKAKNNNQSVSNPYKCSQC
PASFGTSFNLKRHQRIHTGTRPYKCGQCQAAFITKAQLTTHQRTHTGEKP
YKCHICGGRFIQQNNLKRHVMTHTGQKPFKCDRCPAAFISSSDLKRHIRV
HTGEKPYKCVHCNKGFTTSGNLSSHYKMHTGEKPYKCNLCNASFSHQSNL
KTHVKRHVLPFKCGCGEGWATQSELFKHMETCKVAKEYHPPVSVLPLTHP
VLVKAE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011350XLOC_011350Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020220TCONS_00020220Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 601..623
e-value: 0.0011
score: 28.3
coord: 392..414
e-value: 0.019
score: 24.2
coord: 629..651
e-value: 0.0021
score: 27.3
coord: 685..707
e-value: 4.0E-4
score: 29.7
coord: 573..595
e-value: 0.0024
score: 27.1
coord: 545..567
e-value: 2.5E-4
score: 30.4
coord: 495..518
e-value: 0.14
score: 21.2
coord: 657..679
e-value: 0.0019
score: 27.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 603..623
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 497..518
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 575..595
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 687..707
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 547..567
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 659..679
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 394..414
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 631..651
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 573..600
score: 16.061
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 685..707
score: 11.385
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 629..656
score: 16.145
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 657..684
score: 16.207
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 601..628
score: 15.251
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 545..572
score: 15.459
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 392..419
score: 9.64
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 581..638
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 544..595
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 679..728
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 637..694
NoneNo IPR availableGENE3D3.30.160.60coord: 642..662
e-value: 1.9E-18
score: 66.1
NoneNo IPR availableGENE3D2.10.110.10coord: 697..742
e-value: 2.2E-8
score: 33.7
NoneNo IPR availableGENE3D3.30.160.60coord: 333..403
e-value: 0.0012
score: 18.3
NoneNo IPR availableGENE3D3.30.60.20coord: 507..544
e-value: 0.049
score: 13.1
NoneNo IPR availableGENE3D3.30.160.60coord: 622..641
e-value: 2.8E-18
score: 65.3
NoneNo IPR availableGENE3D3.30.160.60coord: 678..696
e-value: 3.4E-12
score: 45.8
NoneNo IPR availableGENE3D3.30.160.60coord: 607..621
e-value: 2.3E-12
score: 46.3
coord: 663..677
e-value: 3.7E-13
score: 48.8
NoneNo IPR availableGENE3D2.40.155.10coord: 560..606
e-value: 1.9E-31
score: 109.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 629..651
e-value: 8.8E-5
score: 22.7
coord: 685..707
e-value: 8.0E-5
score: 22.8
coord: 601..623
e-value: 1.4E-4
score: 22.0
coord: 545..567
e-value: 1.2E-4
score: 22.2
coord: 573..595
e-value: 3.1E-4
score: 20.9
coord: 657..679
e-value: 2.6E-4
score: 21.1
NoneNo IPR availableGENE3D3.30.160.60coord: 404..506
e-value: 1.1E-8
score: 34.6
NoneNo IPR availableGENE3D3.30.160.60coord: 545..559
e-value: 9.5E-10
score: 38.0

Blast
[Close]
BLAST of TCONS_00020220-protein vs. Swiss-Prot (Human)
Match: ZNF79 (Zinc finger protein 79 OS=Homo sapiens GN=ZNF79 PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 2.755e-54
Identity = 92/188 (48.94%), Postives = 120/188 (63.83%), Query Frame = 0 
Query:  544 PYKCSQCPASFGTSFNLKRHQRIHTGTRPYKCGQCQAAFITKAQLTTHQRTHTGEKPYKCHICGGRFIQQNNLKRHVMTHTGQKPFKCDRCPAAFISSSDLKRHIRVHTGEKPYKCVHCNKGFTTSGNLSSHYKMHTGEKPYKCNLCNASFSHQSNLKTHVKRHV--LPFKCG-CGEGWATQSELFKH 728
            PYKCS+C  +F  + NL +HQR HTG +PY+C +C+ AF   + L  HQR HTGEKPY+C  CG  F    NL  H  THTG+KP+KC  C  AF   +   +H R+HTGEKPY+C  C K F+ S NL++H + HTGEKPYKC+ C  +FS  +NL  H K H    P+KC  CG+ ++  S L +H
Sbjct:  248 PYKCSECGRAFSQNANLTKHQRTHTGEKPYRCSECEKAFSDCSALVQHQRIHTGEKPYECSDCGKAFRHSANLTNHQRTHTGEKPYKCSECGKAFSYCAAFIQHQRIHTGEKPYRCAACGKAFSQSANLTNHQRTHTGEKPYKCSECGKAFSQSTNLIIHQKTHTGEKPYKCNECGKFFSESSALIRH 435

HSP 2 Score: 186.037 bits (471), Expect = 4.646e-51
Identity = 92/188 (48.94%), Postives = 115/188 (61.17%), Query Frame = 0 
Query:  544 PYKCSQCPASFGTSFNLKRHQRIHTGTRPYKCGQCQAAFITKAQLTTHQRTHTGEKPYKCHICGGRFIQQNNLKRHVMTHTGQKPFKCDRCPAAFISSSDLKRHIRVHTGEKPYKCVHCNKGFTTSGNLSSHYKMHTGEKPYKCNLCNASFSHQSNLKTHVKRH--VLPFKCG-CGEGWATQSELFKH 728
            PY+CS C  +F  S NL  HQR HTG +PYKC +C  AF   A    HQR HTGEKPY+C  CG  F Q  NL  H  THTG+KP+KC  C  AF  S++L  H + HTGEKPYKC  C K F+ S  L  H+ +HTGEKPY+CN C  +F+  S+L  H + H  V P++C  CG+ +   S   +H
Sbjct:  304 PYECSDCGKAFRHSANLTNHQRTHTGEKPYKCSECGKAFSYCAAFIQHQRIHTGEKPYRCAACGKAFSQSANLTNHQRTHTGEKPYKCSECGKAFSQSTNLIIHQKTHTGEKPYKCNECGKFFSESSALIRHHIIHTGEKPYECNECGKAFNQSSSLSQHQRIHTGVKPYECSECGKAFRCSSAFVRH 491

HSP 3 Score: 176.792 bits (447), Expect = 8.137e-48
Identity = 85/165 (51.52%), Postives = 102/165 (61.82%), Query Frame = 0 
Query:  544 PYKCSQCPASFGTSFNLKRHQRIHTGTRPYKCGQCQAAFITKAQLTTHQRTHTGEKPYKCHICGGRFIQQNNLKRHVMTHTGQKPFKCDRCPAAFISSSDLKRHIRVHTGEKPYKCVHCNKGFTTSGNLSSHYKMHTGEKPYKCNLCNASFSHQSNLKTHVKRHV 708
            PYKCS+C  +F       +HQRIHTG +PY+C  C  AF   A LT HQRTHTGEKPYKC  CG  F Q  NL  H  THTG+KP+KC+ C   F  SS L RH  +HTGEKPY+C  C K F  S +LS H ++HTG KPY+C+ C  +F   S    H + H 
Sbjct:  332 PYKCSECGKAFSYCAAFIQHQRIHTGEKPYRCAACGKAFSQSANLTNHQRTHTGEKPYKCSECGKAFSQSTNLIIHQKTHTGEKPYKCNECGKFFSESSALIRHHIIHTGEKPYECNECGKAFNQSSSLSQHQRIHTGVKPYECSECGKAFRCSSAFVRHQRLHA 496

HSP 4 Score: 152.525 bits (384), Expect = 1.820e-39
Identity = 69/139 (49.64%), Postives = 88/139 (63.31%), Query Frame = 0 
Query:  544 PYKCSQCPASFGTSFNLKRHQRIHTGTRPYKCGQCQAAFITKAQLTTHQRTHTGEKPYKCHICGGRFIQQNNLKRHVMTHTGQKPFKCDRCPAAFISSSDLKRHIRVHTGEKPYKCVHCNKGFTTSGNLSSHYKMHTGE 682
            PY+C+ C  +F  S NL  HQR HTG +PYKC +C  AF     L  HQ+THTGEKPYKC+ CG  F + + L RH + HTG+KP++C+ C  AF  SS L +H R+HTG KPY+C  C K F  S     H ++H GE
Sbjct:  360 PYRCAACGKAFSQSANLTNHQRTHTGEKPYKCSECGKAFSQSTNLIIHQKTHTGEKPYKCNECGKFFSESSALIRHHIIHTGEKPYECNECGKAFNQSSSLSQHQRIHTGVKPYECSECGKAFRCSSAFVRHQRLHAGE 498
The following BLAST results are available for this feature:
BLAST of TCONS_00020220-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNF792.755e-5448.94Zinc finger protein 79 OS=Homo sapiens GN=ZNF79 PE... [more]
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