TCONS_00020093-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020093-protein
Unique NameTCONS_00020093-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length324

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020093-protein ID=TCONS_00020093-protein|Name=TCONS_00020093-protein|organism=Clytia hemisphaerica|type=polypeptide|length=324bp
QNGGKVVTIFSKAHASSFHHETFPNPDITFKHSYKAIKIKNHKRYTATMP
RKKVPQEGILDMSEAGPSSQSQSIPKSQSQPKKRISNASEKVNVNNPDFK
RKVSEMVRYLLFADRKKNGIKRADIIKNVLKENPKWFAKVFEEASLKINQ
VFGLDVVSLETEKKDKSKGYTLISALDDDIIQSDSTVVSWGEESQEMALL
LIILSLIFMNDGPLTEASLWFTLKKIGVYKERKHRVFGDVNKLVNNDFIK
VFYLTRHKEISADGPSFTYSIGPRAAKEISKRKILTFVSQVYGYDDIKKW
KNQYEIVEEEETHANQSQMDVDSD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011297XLOC_011297Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020093TCONS_00020093Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002190MHD_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002190MAGE homology domainSMARTSM01373MAGE_2coord: 106..284
e-value: 2.0E-46
score: 170.2
IPR002190MAGE homology domainPFAMPF01454MAGEcoord: 106..281
e-value: 5.7E-30
score: 104.5
IPR002190MAGE homology domainPROSITEPS50838MAGEcoord: 99..295
score: 38.079
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..96

Blast
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BLAST of TCONS_00020093-protein vs. Swiss-Prot (Human)
Match: NSE3 (Non-structural maintenance of chromosomes element 3 homolog OS=Homo sapiens GN=NSMCE3 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.897e-37
Identity = 80/214 (37.38%), Postives = 122/214 (57.01%), Query Frame = 0 
Query:  102 KVSEMVRYLLFADRKKNGIKRADIIKNVLKENPKWFAKVFEEASLKINQVFGLDVVSLETEKKDKSKGYTLISALDDDIIQSDSTVVSWGEESQEMALLLIILSLIFMNDGPLTEASLWFTLKKIGVYKERKHRVFGDVNKLVNNDFIKVFYLTRHKEISADGPSFTYSIGPRAAKEISKRKILTFVSQVYGYDDIKKWKNQY-EIVEEEETHA 314
            KVSE+V++LL  D+KK  IKRADI+K+V+ +    F  +F+ A+ ++  VFG  +V LE     KS  Y LI+ L+   ++ D+ +    + +    LL+I+L LIFM    + E   W  L+++GVY  +KH +FGD  KL+  DF++  YL   +    D   + +  GPR   E SK K+L FV++V+   D K W  QY E + +EE  A
Sbjct:   88 KVSELVQFLLIKDQKKIPIKRADILKHVIGDYKDIFPDLFKRAAERLQYVFGYKLVELEP----KSNTYILINTLEP--VEEDAEMRG-DQGTPTTGLLMIVLGLIFMKGNTIKETEAWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHN-QDPKDWPAQYCEALADEENRA 293
The following BLAST results are available for this feature:
BLAST of TCONS_00020093-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NSE35.897e-3737.38Non-structural maintenance of chromosomes element ... [more]
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