TCONS_00018919-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00018919-protein
Unique Name	TCONS_00018919-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	409

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00018919-protein ID=TCONS_00018919-protein|Name=TCONS_00018919-protein|organism=Clytia hemisphaerica|type=polypeptide|length=409bp
MVFVVGVGLTKFSKPHARKWDYPDIGREAASNALNDAGIDYSQIDAAVVS
HVYGESTSELGLTGIPIFNTNNNCSSASCALMLSRLLVMSGEYSCVLALG
FEKMDSGLTVKWDDRIHPSQRHFDRMEECGVPKGSVTPTLSHFTSEVMKI
YAYSAREHEKRYGTTKEHSAKIAYKNHFHSQYNPNASLQKVLPMEAINAR
EIVYPLTLAMCALTADGGAAAVVCNKDFMIKHKLQNKAVEIIAQQMTTDL
PSSFNTDVTNVGGLEMARQAANYCYEKSGYTARDVDVIELHDCFAPTELL
LYEALGLCETGKAGELIDNAKWIENKQGGKLCQLGNKWVVNTDGGLESKG
HPIGATGIAQCAEIVYQLRGEAGKRQVEGAQIGLQHNFGIGGAAVVTMYR
RIGVRPSKL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010605	XLOC_010605	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00018919	TCONS_00018919	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020617	Thiolase_C
IPR002155	Thiolase
IPR020616	Thiolase_N
IPR016039	Thiolase-like

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020617	Thiolase, C-terminal	PFAM	PF02803	Thiolase_C	coord: 269..384 e-value: 2.5E-10 score: 40.0
IPR002155	Thiolase	PIRSF	PIRSF000429	Ac-CoA_Ac_transf	coord: 1..400 e-value: 9.1E-49 score: 164.5
IPR020616	Thiolase, N-terminal	PFAM	PF00108	Thiolase_N	coord: 2..198 e-value: 3.3E-13 score: 49.5
IPR016039	Thiolase-like	GENE3D	3.40.47.10		coord: 240..400 e-value: 4.2E-17 score: 61.9
IPR016039	Thiolase-like	GENE3D	3.40.47.10		coord: 1..239 e-value: 4.9E-27 score: 94.3
IPR016039	Thiolase-like	SUPERFAMILY	53901	Thiolase-like	coord: 14..109 coord: 185..310 coord: 339..401
None	No IPR available	CDD	cd00829	SCP-x_thiolase	coord: 5..399 e-value: 1.61871E-120 score: 356.958

Blast

[Close]

BLAST of TCONS_00018919-protein vs. Swiss-Prot (Human)
Match: NLTP (Non-specific lipid-transfer protein OS=Homo sapiens GN=SCP2 PE=1 SV=2)

HSP 1 Score: 380.948 bits (977), Expect = 1.936e-128
Identity = 205/411 (49.88%), Postives = 269/411 (65.45%), Query Frame = 0

Query:    2 VFVVGVGLTKFSKPHARK-WDYPDIGREAASNALNDAGIDYSQIDAAVVSHVYGESTS-------ELGLTGIPIFNTNNNCSSASCALMLSRLLVMSGEYSCVLALGFEKMDSG-LTVKWDDRIHPSQRHFDRM-EECGVPKGSVTPTLSHFTSEVMKIYAYSAREHEKRYGTTKEHSAKIAYKNHFHSQYNPNASLQKVLPM-EAINAREIVYPLTLAMCALTADGGAAAVVCNKDFMIKHKLQNKAVEIIAQQMTTDLPSSFN-TDVTNVGGLEMARQAANYCYEKSGYTARDVDVIELHDCFAPTELLLYEALGLCETGKAGELIDNAKWIENKQGGKLCQLGNKWVVNTDGGLESKGHPIGATGIAQCAEIVYQLRGEAGKRQVEGAQIGLQHNFGIGGAAVVTMYR 400
            VFVVGVG+TKF KP A    DYPD+  EA   AL DA I YS +D A V +V+G+ST         LG+TGIPI N NNNC++ S AL ++R L+  G   CVLALGFEKM  G L +K+ DR  P+ +H D +  + G+    V P          +++ Y+ +EH ++YGT  EH AKI +KNH HS  NP +  Q    + E + ++E+   LT+  C  T+DG AAA++ ++ F+ K+ LQ+KAVEI+AQ+M TDLPSSF    +  + G +M+++AA  CYEKSG T  D+DVIELHDCF+  ELL YEALGLC  G+   L+D     +N  GGK       WV+N  GGL SKGHP+GATG+AQCAE+ +QLRGEAGKRQV GA++ LQHN GIGGA VVT+Y+
Sbjct:   14 VFVVGVGMTKFVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGDSTCGQRAIYHSLGMTGIPIINVNNNCATGSTALFMARQLIQGGVAECVLALGFEKMSKGSLGIKFSDRTIPTDKHVDLLINKYGLSAHPVAP----------QMFGYAGKEHMEKYGTKIEHFAKIGWKNHKHSVNNPYSQFQDEYSLDEVMASKEVFDFLTILQCCPTSDGAAAAILASEAFVQKYGLQSKAVEILAQEMMTDLPSSFEEKSIIKMVGFDMSKEAARKCYEKSGLTPNDIDVIELHDCFSTNELLTYEALGLCPEGQGATLVDRG---DNTYGGK-------WVINPSGGLISKGHPLGATGLAQCAELCWQLRGEAGKRQVPGAKVALQHNLGIGGAVVVTLYK 404

The following BLAST results are available for this feature:

BLAST of TCONS_00018919-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00018919-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NLTP	1.936e-128	49.88	Non-specific lipid-transfer protein OS=Homo sapien...	[more]

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TCONS_00018919-protein (polypeptide) - C. hemisphaerica