TCONS_00018467-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018467-protein
Unique NameTCONS_00018467-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1769

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018467-protein ID=TCONS_00018467-protein|Name=TCONS_00018467-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1769bp
MDVIRSWFEVPAIAHFFHVFKNSFGLIEFDIEDFEDALFLDSAENCSSFL
PDLVVQLLRGLYKTKDGLQITIENYSHYLQDLLEFRYAGRHNPVKDGDFK
AITTREKVEVLYDMCNWRLEPEDVVELTKDLEAEEMRVMPVGFDEEGHQY
WYFYGTRLYQEKCLNDNIADMSELSESEEKPKAQLKTKKKRGKKRKFLRK
TKSGRSVKPRMEFNRESSEEDEENEEVEEKEHENESESETQSANVNLDEK
PVLQPQEDNEWTLVCSTVQEWADIVEKFSNTKHKSEKVLLKGLRELNTVM
PDIFVEKEKALQNKLLEMAPRRSSDRIHIKMQVREDEHRKKEQKRLLKSE
MKAREAEKRLKELEKEKQKEREKRYLERERNLELRAKRAKQREEMKEVQT
DPELAKQIRVKQTQSAASSFKFDLEGEEDDQFIAMEKVLEVMKDHDDSWP
FLEPVDAAEAPNYYEFIKNPMDLSKIAEKIENKTYKDESEFANDVYLMLD
NCEMYNGTLSPFTKLAGKIKKVFEKQMKKEFPPEMDSNDEMYVEEVAPQR
KKLKQEKEKKTKSPKEAKPKKVKLESLAVFKRNNAILTPEFAHAQILQAQ
AQLLHKTQTDATVSQLLNKFGIPAEVLAKLTPAQMQTLMMQLRSGKLRAP
GKSPKPVSTENLTPIGKPKVLKTISPKPVLSKPAGSLRMIAPKREHLSIS
QFIRANTTPSPGLKIDSPNTLSFRQVAQNGSLRFMATQNTPRSANFTFPS
TTKLPSLHSIPPSKALPNPLFPVTAKSNAQQKTKPATSVNIAKPILNITN
RPPSTLNTSTLRQQSVPGQFSQPNSNLSNTSTTPTIKPLTTSAVALRAMG
VPILNQANVRYIGQPNGQLQKILYLPTQAVNKSRAVITQPLLRTQSIPVQ
RFITPANAFRATSPQTQQTNIPKPVFINSHQPNGPLKVASSQVLQRSISA
VAQSAKESVFVKPKEEAAIPSKQNMHGLKKAVQQVAAVTNINAKLQNHLQ
NRNSHVPVSTIKKEATLLPEQSKPLLYKLPLNMVQVAVKPTINSPITPKT
SQTATTHSTTSCPRTVATTLILSPIRAVKPVNQIPLVKGAIPASVAVNQP
GISFILTSTGLVSVSLPASANKKSQATKQTIPTQNIITSNAPARLLQKGF
ALPLTPPAPGTAPPKGFLVPTTQGTAPPKGFLVPNTCGSAPTKAFLVPSS
QSTTPPKGFFVPTTQGTTLPKGFLIPVTKGMTLTNNPAQRTITVAITQST
NSINKPQLSTQPVKLVTQGIASTAQLMLSSNNRTSLQPIAQKYNQPASLL
NSFPQQVLVNNLKSQLLYNQPNVSTNHQHLQTKDVKPLPTTQQLKKIQLP
TQPVTQFQKIRSPSATSSASVSNIAPPPPKQVKLEPSTSSQPVTPAVTFK
TEAATTSIGTVSTTVKSETGTPSLFQTTDKKDISPEKLRDAETLLGLINP
TLHASVKTDTSSTPTKSDPIHPRPSLNNTSTSSTQKPSLGTTPLLTMTIP
SSPTSDKNQLKIQLPNFQKYISTEPQQAKMIISQPQQTSKSLQQLSSFKQ
QTQREQFSTANQQTSNSLQQLSSFKQQTQREQFSTANQQTFNSLQQLSSF
KQQTPMSREQFSTANQQTSNSLRQLSDIPKSPAQMNLTPQQLQTLLKINE
SLPPALQKELAASFNTNKNIVQQKSQTTAKQFQPAQQRLAPFIQNLQQQQ
GKSLTTSKPPQQQSKQPTTSKPPQQQQQQESQKMVVDANQLIKLQQEGKV
LVTPNGQMFLVANNNPTQK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010345XLOC_010345Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018467TCONS_00018467Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR018501DDT_dom
IPR018359Bromodomain_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 210..240
NoneNo IPR availableCOILSCoilCoilcoord: 339..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1598..1622
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1531..1585
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..571
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1414..1435
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1696..1735
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 815..834
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1349..1393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1455..1508
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 476..494
score: 31.92
coord: 494..513
score: 35.76
coord: 446..459
score: 44.25
coord: 460..476
score: 52.69
IPR001487BromodomainSMARTSM00297bromo_6coord: 423..532
e-value: 2.0E-35
score: 133.7
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 435..517
e-value: 2.2E-22
score: 78.8
IPR001487BromodomainGENE3D1.20.920.10coord: 424..565
e-value: 7.2E-34
score: 115.7
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 443..513
score: 20.724
IPR001487BromodomainSUPERFAMILY47370Bromodomaincoord: 429..533
IPR018501DDT domainPFAMPF02791DDTcoord: 15..61
e-value: 9.6E-5
score: 22.5
IPR018501DDT domainPROSITEPS50827DDTcoord: 4..67
score: 9.095
IPR018359Bromodomain, conserved sitePROSITEPS00633BROMODOMAIN_1coord: 448..505

Blast
[Close]
BLAST of TCONS_00018467-protein vs. Swiss-Prot (Human)
Match: CECR2 (Cat eye syndrome critical region protein 2 OS=Homo sapiens GN=CECR2 PE=1 SV=2)

HSP 1 Score: 299.286 bits (765), Expect = 3.458e-82
Identity = 196/589 (33.28%), Postives = 295/589 (50.08%), Query Frame = 0 
Query:    4 IRSWFEVPAIAHFFHVFKNSFGLIEFDIEDFEDALFLDSAENCSSFLPDLVVQLLRGLYKTKDGLQITIENYSHYLQDLLEFRYA---GRHNPVKDGDFKAITTREKVEVLYDMCNWRLEPEDVVELTKDLEAEEMRVMPVGFDEEGHQYWYFYGTRLYQEKCLNDNIADMSELSESEEKPKAQLKTKKKRGKKRKFLRKTKSGRSVKPRMEFNRES--SEEDEENEEVEEKEHENESESETQSANVNLDEKPVLQPQEDNEWTLVCSTVQEWADIVEKFSNTKHKSEKVLLKGLRELNTVMPDI---FVEKEKALQNKLLEMAPRRSSDRIHIKMQVREDEH------------------------RKKEQKRLLKSE--------MKAREAE------KRLKELEKEKQKEREKRYLERERNLELRAKRAKQREEMKEVQTDPELAKQIRVKQTQSAASSFKFDLEGEEDDQFIAMEKVLEVMKDHDDSWPFLEPVDAAEAPNYYEFIKNPMDLSKIAEKIENKTYKDESEFANDVYLMLDNCEMYNGTLSPFTKLAGKIKKVFEKQMKKEFPPE-MDSNDEMYVEE 545
            +RSW+EVPAIAHF  +F+ +F L +F+IE+ E AL  D  E    F+ DL+  LL+G Y+ +D   IT + +  YL+D++ +R+    G+ NP+++  F+ +  R +VE+L+ +C++RL+ +DV +L K L+A+ +RV P+G D  G  YWYFYGTR+Y+E  +         LS   E  K       K GK+R        GR  K R +   E   SE+ EEN    E +  + S+   Q                   W L+C T +EW  + E F       E+ L K L E    +P+I     +K K  Q    E+ PR  SD + IK  V+++E                         +KKEQ+++LK E        +KA E         R   L   +  +R KR   RE    L A+  +   E+  +  +  + ++ + K          F+L    DD F AM KVL+V+K H DSWPFLEPVD + APNYY+ IK PMD+S + +K+    Y  + EF ND+  M  NC  YNG  S +TK++  +++ F + M K FP E  D+++E ++ E
Sbjct:   14 LRSWWEVPAIAHFCSLFRTAFRLPDFEIEELEAALHRDDVE----FISDLIACLLQGCYQRRD---ITPQTFHSYLEDIINYRWELEEGKPNPLREASFQDLPLRTRVEILHRLCDYRLDADDVFDLLKGLDADSLRVEPLGEDNSGALYWYFYGTRMYKEDPVQGKSNGELSLSRESEGQKNVSSIPGKTGKRR--------GRPPK-RKKLQEEILLSEKQEENSLASEPQTRHGSQGPGQGT-----------------WWLLCQTEEEWRQVTESFRERTSLRERQLYKLLSE--DFLPEICNMIAQKGKRPQRTKAELHPRWMSDHLSIK-PVKQEETPVLTRIEKQKRKEEEEERQILLAVQKKEQEQMLKEERKRELEEKVKAVEGMCSVRVVWRGACLSTSRPVDRAKRRKLREERAWLLAQGKELPPELSHLDPNSPMREEKKTKDL--------FEL----DDDFTAMYKVLDVVKAHKDSWPFLEPVDESYAPNYYQIIKAPMDISSMEKKLNGGLYCTKEEFVNDMKTMFRNCRKYNGESSEYTKMSDNLERCFHRAMMKHFPGEDGDTDEEFWIRE 554
The following BLAST results are available for this feature:
BLAST of TCONS_00018467-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CECR23.458e-8233.28Cat eye syndrome critical region protein 2 OS=Homo... [more]
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