TCONS_00018373-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018373-protein
Unique NameTCONS_00018373-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length504

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018373-protein ID=TCONS_00018373-protein|Name=TCONS_00018373-protein|organism=Clytia hemisphaerica|type=polypeptide|length=504bp
MATDRLGNYIDPRMYSTGITGDLLFRGPGLFQNVQFIPERITQFSISPDG
IRYYKVAWQEAWLPEHQLIQHQTLIEAYWRTQNDLTNANNAGESSQTITS
NANKVQIAVSNISKSTNAPFYGNLNLTELTAAATTNASNAGDSPETQSTP
ATIKIKAKNTTSSAKTPTGSIVEATDESAVTAAAHTILAQVMKDSEVEKA
VEGEEGQDENTYIEIPLNVVLEATIEAENAATNESTPKVELKPHQAAWRK
KANSSSLQLDGFDLVNIENSNASMEELEANARETLSSFRRKRVRFPNGTS
KLPQECFFCLKKLSNRKKLREHQFSVHFKNVGEFMCGICKQRFVFGRQLK
AHMLVHSDNRNYQCQYCGLTCKRRSHLHKHVQTHNQERNYRCDVCHTNFK
VQAELKDHCMSDHKNQTNQCNVCKQTLHTPFSVYIHSMRHSGTRDHICET
CGASFKRKQHLIAHRNTHAELREKIKCPACDKEVPDRKYLRRHMEQMHKE
LAAX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010302XLOC_010302Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018373TCONS_00018373Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 267..287
NoneNo IPR availableGENE3D2.20.28.30coord: 401..428
e-value: 0.0095
score: 15.7
coord: 345..372
e-value: 9.1E-10
score: 38.2
NoneNo IPR availableGENE3D3.30.160.60coord: 373..400
e-value: 2.5E-10
score: 39.8
coord: 478..500
e-value: 0.0053
score: 16.4
coord: 429..455
e-value: 1.1E-8
score: 34.6
NoneNo IPR availableGENE3D3.30.160.60coord: 302..344
e-value: 2.4E-5
score: 24.1
NoneNo IPR availableGENE3D2.20.28.10coord: 456..477
e-value: 7.7E-7
score: 28.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 446..468
e-value: 6.0E-4
score: 20.0
coord: 362..384
e-value: 0.0037
score: 17.5
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 334..356
e-value: 0.45
score: 19.6
coord: 390..413
e-value: 0.5
score: 19.4
coord: 418..440
e-value: 12.0
score: 12.7
coord: 475..498
e-value: 0.0072
score: 25.5
coord: 362..384
e-value: 0.03
score: 23.5
coord: 304..327
e-value: 4.6
score: 16.2
coord: 446..468
e-value: 0.032
score: 23.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 364..384
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 392..413
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 306..327
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 336..356
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 448..468
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 477..498
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 446..473
score: 11.655
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 334..361
score: 10.284
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 362..389
score: 11.739
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 390..418
score: 8.995
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 343..399
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 440..493
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 384..436

Blast
[Close]
BLAST of TCONS_00018373-protein vs. Swiss-Prot (Human)
Match: ZBT41 (Zinc finger and BTB domain-containing protein 41 OS=Homo sapiens GN=ZBTB41 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.035e-23
Identity = 65/205 (31.71%), Postives = 100/205 (48.78%), Query Frame = 0 
Query:  306 CFFCLKKLSNRKKLREHQFSVHFKNVGE--FMCGICKQRFVFGRQLKAHMLVHSDNRNYQCQYCGLTCKRRSHLHKHVQTHNQERNYRCDVCHTNFKVQAELKDHCMSDH---------KNQTNQCNVCKQTLHTPFSVYIHSMRHSGTRDHICETCGASFKRKQHLIAHRNTHAELREKIKCPACDKEVPDRKYLRRHMEQMHK 499
            CF C K +  R  L+EH   +H    GE   +C IC Q F  G   + H+ VH D++ Y+C  CG T  R  HL KH + H+ E+ ++C+ C   F  +  L  H  S H         K   +QC+VCK+      S+ +H   HSG + + C+ C  SF+ K+ L  H   H++ R    C  C+     +  L+ H++ +H+
Sbjct:  549 CFICGKSVRERTTLKEH-LRIH---SGEKPHLCSICGQSFRHGSSYRLHLRVHHDDKRYECDECGKTFIRHDHLTKHKKIHSGEKAHQCEECGKCFGRRDHLTVHYKSVHLGEKVWQKYKATFHQCDVCKKIFKGKSSLEMHFRTHSGEKPYKCQICNQSFRIKKTLTKHLVIHSDAR-PFNCQHCNATFKRKDKLKYHIDHVHE 748

HSP 2 Score: 86.6557 bits (213), Expect = 8.832e-18
Identity = 56/202 (27.72%), Postives = 92/202 (45.54%), Query Frame = 0 
Query:  303 PQECFFCLKKLSNRKKLREHQFSVHFKNVGEFMCGICKQRFVFGRQLKAHM-LVHSDNRNYQCQYCGLTCKRRSHLHKHVQTHNQERNYRCDVCHTNFKVQAELKDHCMSDHKNQTNQCNVCKQTLHTPFSVYIHSMRHSGTRDHICETCGASFKRKQHLIAHRNTHAELREKI---------KCPACDKEVPDRKYLRRHM 494
            P +C +C +   +R    +HQ   H   +G F C IC ++F     LK H+   H   R + C  CG + + R+ L +H++ H+ E+ + C +C  +F+  +  + H    H ++  +C+ C +T      +  H   HSG + H CE CG  F R+ HL  H  +   L EK+         +C  C K    +  L  H 
Sbjct:  490 PFKCTYCEEHFKSRFARLKHQEKFH---LGPFPCDICGRQFNDTGNLKRHIECTHGGKRKWTCFICGKSVRERTTLKEHLRIHSGEKPHLCSICGQSFRHGSSYRLHLRVHHDDKRYECDECGKTFIRHDHLTKHKKIHSGEKAHQCEECGKCFGRRDHLTVHYKS-VHLGEKVWQKYKATFHQCDVCKKIFKGKSSLEMHF 687
The following BLAST results are available for this feature:
BLAST of TCONS_00018373-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZBT415.035e-2331.71Zinc finger and BTB domain-containing protein 41 O... [more]
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