TCONS_00018181-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018181-protein
Unique NameTCONS_00018181-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length320

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018181-protein ID=TCONS_00018181-protein|Name=TCONS_00018181-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
MNVKNLTTISLILFWFETQIIIIASKRFEIVGRNKIPNKTPYSTVDVKFE
QHCFSKCHHVITCFSFLVQRTSNAMPIRCHFYNSTTTGLTGSQATEDNTI
LYTAQIQDCQDLYNSGHKSSGVYSINLLGKGQRDIRCDMEIEGGGWTVIL
YRTTSQHNWNVGWNQYKNGIGEITGDFYLGNELVHQITDSGQYELYFRTQ
IEVANSPANADNTYFGWHGNFHVANEADYYRLTVGDIKPGSQPQINDLNG
MQFTTKDVKRDNHHHNCASFKLSAFWWDGCGRIQPFGPYLHSDSQKCMGI
NVSGVGRLCTLNFQMLVRRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010211XLOC_010211Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018181TCONS_00018181Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 104..320
e-value: 2.0E-23
score: 93.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 107..300
e-value: 4.3E-38
score: 131.2
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 100..292
score: 29.918
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 101..301
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 253..303
e-value: 2.5E-11
score: 43.0
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 51..252
e-value: 5.0E-41
score: 140.3

Blast
[Close]
BLAST of TCONS_00018181-protein vs. Swiss-Prot (Human)
Match: FBCD1 (Fibrinogen C domain-containing protein 1 OS=Homo sapiens GN=FIBCD1 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 3.559e-26
Identity = 67/188 (35.64%), Postives = 97/188 (51.60%), Query Frame = 0 
Query:  104 AQIQDCQDLYNSGHKSSGVYSINLLG-KGQRDIRCDMEIEGGGWTVILYRTTSQHNWNVGWNQYKNGIGEITGDFYLGNELVHQITDSGQYELYFRTQIEVANSPANADNTYFGWHGNFHVANEADYYRLTVGDIKPGSQPQINDLNGMQFTTKDVKRDNHHHNCASFKLSAFWWDGCGRIQPFGPYL 290
            ++ +DC D+  SG +  GVYS+          + CDM  +GGGWTV   R     N+  GW+ Y++G G +TG+ +LG + +H +T    YEL+   + +  N  A A    FG  G F V  E D Y LTV D    +   +   +GM+FTTKD   D+  +NCA+F   A+W+  C      G YL
Sbjct:  239 SRPRDCLDVLLSGQQDDGVYSVFPTHYPAGFQVYCDMRTDGGGWTVFQRREDGSVNFFRGWDAYRDGFGRLTGEHWLGLKRIHALTTQAAYELHVDLE-DFENGTAYARYGSFGV-GLFSVDPEEDGYPLTVADYSGTAGDSLLKHSGMRFTTKDRDSDHSENNCAAFYRGAWWYRNCHTSNLNGQYL 424
The following BLAST results are available for this feature:
BLAST of TCONS_00018181-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBCD13.559e-2635.64Fibrinogen C domain-containing protein 1 OS=Homo s... [more]
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