TCONS_00017438-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00017438-protein
Unique Name	TCONS_00017438-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	489

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00017438-protein ID=TCONS_00017438-protein|Name=TCONS_00017438-protein|organism=Clytia hemisphaerica|type=polypeptide|length=489bp
MALNLRLQQIVLGLKNKSEQIRHRTAHELQHFVTTELREATSDQYPDLMD
TLIHFIFDLVNSTDVNEKKGGVLAIVCLIGVDGGNATRTSRFANYLRNML
PSNDVSVMELVAKAVGRLAQVGGTYAADYVEFEVKKSLEWLSGDRHEGRR
HAAVLVLRELAVNAPTFFFQHVQSFFDNFYNAVRDPKPAIREGAVEALRA
CFAICAQRETKKNHYTHWYQQVYEEAKKGFENTANTKEKGTGLTRDDKVH
GSLLVMQELIRNSSSEGERLRQQMEETYGEKPNDNIRSREMTFSKSTRFL
GNHGHQHQLSLLPLLESGNHHIPNSQSRFCKDFMESKFDEICTLVLKQKS
SARSLCQHTLLTFLPQLAAFKPKDFVKSHLQDTILHMIQQTKKERERSAA
FEAIGLLAFAVKNDVNIAHWRHWRDVLKSIKALLPSSNRDQTNRKKTNHV
DPMVFACVSMTAKAVGPKMAKTDTLFKEIIDKMLIVGLR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_009759	XLOC_009759	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00017438	TCONS_00017438	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 5..484 e-value: 5.8E-28 score: 97.3
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 305..440 coord: 7..207

Blast

[Close]

BLAST of TCONS_00017438-protein vs. Swiss-Prot (Human)
Match: MTOR (Serine/threonine-protein kinase mTOR OS=Homo sapiens GN=MTOR PE=1 SV=1)

HSP 1 Score: 444.121 bits (1141), Expect = 9.069e-140
Identity = 253/503 (50.30%), Postives = 334/503 (66.40%), Query Frame = 0

Query:    7 LQQIVLGLKNKSEQIRHRTAHELQHFVTTELREATSDQYPDLMDTLIHFIFDLVNSTDVNEKKGGVLAIVCLIGVDGGNATRTSRFANYLRNMLPSNDVSVMELVAKAVGRLAQVGGTYAADYVEFEVKKSLEWLSGDRHEGRRHAAVLVLRELAVNAPTFFFQHVQSFFDNFYNAVRDPKPAIREGAVEALRACFAICAQRETKKNHYTHWYQQVYEEAKKGFENTANTKEKGTGLTRDDKVHGSLLVMQELIRNSSSEGERLRQQMEE-TYGEKPNDNIRSREMTFSKSTR----FLGNHGHQHQLS--LLPLLESGNHH-------IPNS------QSRFCKDFMESKFDEICTLVLKQKSSARSLCQHTLLTFLPQLAAFKPKDFVKS-HLQDTILHMIQQTKKERERSAAFEAIGLLAFAVKNDVNIAHWRHWRDVLKSIKALLPSSNRDQTNRKKTNHVDPMVFACVSMTAKAVGPKMAKTDTLFKEIIDKMLIVGL 488
            LQQ   GLK+++E+ R + A ELQH+VT ELRE + ++     D L H IF+LV+S+D NE+KGG+LAI  LIGV+GGNATR  RFANYLRN+LPSND  VME+ +KA+GRLA  G T+ A+YVEFEVK++LEWL  DR+EGRRHAAVLVLRELA++ PTFFFQ VQ FFDN + AV DPK AIREGAV ALRAC  +  QRE K+     WY+  +EEA+KGF+ T   KEK  G+ RDD++HG+LL++ EL+R SS EGERLR++MEE T  +  +D      M F    R    F      Q Q S  L+ LL   +H         P+       +SR C+D ME KFD++C  VLK ++S  SL Q T+L  LP+LAAF+P  F  + +LQDT+ H++   KKE+ER+AAF+A+GLL+ AV+++  +   R    VL  I+A LP  +     R+K   VD  VF C+SM A+A+GP + +     KE+++ ML VGL
Sbjct:   22 LQQFASGLKSRNEETRAKAAKELQHYVTMELREMSQEESTRFYDQLNHHIFELVSSSDANERKGGILAIASLIGVEGGNATRIGRFANYLRNLLPSNDPVVMEMASKAIGRLAMAGDTFTAEYVEFEVKRALEWLGADRNEGRRHAAVLVLRELAISVPTFFFQQVQPFFDNIFVAVWDPKQAIREGAVAALRACLILTTQREPKEMQKPQWYRHTFEEAEKGFDETL-AKEK--GMNRDDRIHGALLILNELVRISSMEGERLREEMEEITQQQLVHDKYCKDLMGFGTKPRHITPFTSFQAVQPQQSNALVGLLGYSSHQGLMGFGTSPSPAKSTLVESRCCRDLMEEKFDQVCQWVLKCRNSKNSLIQMTILNLLPRLAAFRPSAFTDTQYLQDTMNHVLSCVKKEKERTAAFQALGLLSVAVRSEFKVYLPR----VLDIIRAALPPKDFAH-KRQKAMQVDATVFTCISMLARAMGPGIQQD---IKELLEPMLAVGL 513

The following BLAST results are available for this feature:

BLAST of TCONS_00017438-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00017438-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MTOR	9.069e-140	50.30	Serine/threonine-protein kinase mTOR OS=Homo sapie...	[more]

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TCONS_00017438-protein (polypeptide) - C. hemisphaerica