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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00016881-protein ID=TCONS_00016881-protein|Name=TCONS_00016881-protein|organism=Clytia hemisphaerica|type=polypeptide|length=524bp
MEYSVTFLTLWLYIKEMINTDQPKLFYSLVASSYLIAAVILSVFIGRWVD
RTRKVRQIFLICNTLVIIGNIMYAFHFSPWFLVFGRLVSGADGPLRSVIS
GEIARCYPDSEVLSKFSSMGMAFALGFIVGPGVNFMFTTVDFNIGAWHVT
YVNIPGVYMALFFFITQICVFFMVHDLSREYDLKADAILKPILPGDIKPL
PVTTSFFYAKSNANTQSQSDRFTKSVQIPVKPKETTINFYDDTLIETSHD
NQQERRNKFKMQRLEMSGMFIRPFAFPKLASNQVVPVITEDSSLTSSSSS
NYSSTSSSSSTSSDEQSKADHILCTILTNADSLLILALTFILWYWMVAFD
MWLPIMVVDVMEMSITELNGIVFGFGCISAVILGIMSLKSFSDRMLYNLS
IICMISLAIMELIFIYMRFQHSQMYVNIVLWIIWGTLFAIVVIMDEVFLV
GVMAKMTSSKVQTFSESLRLSMSRFGALLALLTSAALFEWIEYVCGVGVI
VSLLTLVILIKRRKSLRAPVICIK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005215 | transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055085 |
transmembrane transport |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0005215 |
transporter activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001958 | Tetracycline resistance protein TetA/multidrug resistance protein MdtG | PRINTS | PR01035 | TCRTETA | coord: 86..107
score: 30.45
coord: 27..46
score: 20.5
coord: 116..138
score: 31.74 |
| None | No IPR available | GENE3D | 1.20.1250.20 | | coord: 317..517
e-value: 1.6E-5
score: 23.9 |
| None | No IPR available | GENE3D | 1.20.1250.20 | | coord: 2..184
e-value: 7.7E-14
score: 50.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 293..315 |
| IPR011701 | Major facilitator superfamily | PFAM | PF07690 | MFS_1 | coord: 6..444
e-value: 2.3E-17
score: 62.9 |
| IPR020846 | Major facilitator superfamily domain | CDD | cd06174 | MFS | coord: 1..174
e-value: 1.92712E-7
score: 50.3901 |
| IPR020846 | Major facilitator superfamily domain | SUPERFAMILY | 103473 | MFS general substrate transporter | coord: 313..515
coord: 22..186 |
Blast
The following BLAST results are available for this feature:
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