TCONS_00016881 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016881
Unique NameTCONS_00016881
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1580

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016881 ID=TCONS_00016881|Name=TCONS_00016881|organism=Clytia hemisphaerica|type=transcript|length=1580bp
ATGGAATATTCGGTGACATTTCTAACACTCTGGCTGTACATCAAAGAAAT
GATCAACACAGATCAACCAAAGCTATTCTACAGTCTAGTAGCTTCCTCGT
ACCTGATTGCAGCTGTTATCTTATCAGTCTTCATTGGACGGTGGGTCGAC
CGCACGCGTAAAGTACGTCAAATCTTCCTAATCTGCAACACCTTAGTTAT
CATCGGTAACATAATGTATGCTTTCCATTTCTCGCCTTGGTTCTTGGTTT
TCGGCCGATTGGTGTCTGGTGCTGATGGGCCACTCAGGTCGGTGATTTCT
GGAGAAATTGCAAGATGTTATCCAGATTCAGAAGTCCTCAGTAAATTCTC
TTCGATGGGAATGGCATTTGCACTTGGTTTCATTGTTGGACCTGGAGTTA
ATTTCATGTTTACGACGGTCGATTTCAACATTGGTGCTTGGCACGTGACT
TATGTGAACATTCCTGGTGTTTATATGGCACTGTTTTTCTTTATCACTCA
GATATGTGTTTTCTTCATGGTTCATGATCTCTCACGTGAGTACGACCTCA
AAGCTGACGCCATCCTTAAACCAATTTTACCAGGAGATATCAAACCACTA
CCAGTTACAACAAGCTTTTTTTATGCTAAATCCAACGCTAATACCCAATC
ACAATCAGATCGGTTCACAAAATCAGTTCAGATTCCAGTCAAACCAAAAG
AAACAACCATCAACTTTTACGATGACACTTTGATTGAAACATCACATGAC
AATCAACAAGAACGACGTAACAAATTCAAAATGCAACGACTCGAAATGTC
TGGTATGTTTATAAGACCCTTTGCATTCCCAAAGTTAGCATCCAATCAAG
TTGTTCCAGTAATCACTGAAGATTCATCCCTAACATCCAGCTCCTCATCA
AACTACAGCTCTACCTCCTCCTCATCATCGACATCCAGTGATGAACAATC
CAAAGCTGACCATATCCTCTGTACCATCCTAACCAATGCAGATTCTCTCC
TGATCCTCGCGCTCACCTTCATTCTCTGGTACTGGATGGTTGCATTTGAT
ATGTGGTTGCCAATTATGGTGGTCGATGTTATGGAGATGAGCATTACAGA
ACTCAATGGCATTGTCTTCGGTTTCGGTTGCATCTCAGCTGTTATTCTTG
GTATAATGTCTTTAAAATCATTCTCTGATCGAATGTTGTACAATCTCTCA
ATCATATGTATGATCTCTTTAGCTATAATGGAGCTCATCTTCATCTACAT
GCGATTCCAACATTCCCAAATGTATGTCAATATTGTCTTATGGATCATTT
GGGGCACCTTATTTGCCATTGTGGTTATTATGGATGAAGTATTCCTGGTT
GGTGTTATGGCAAAGATGACCAGCTCTAAAGTACAAACATTCTCTGAGAG
CCTTCGACTCTCAATGTCACGCTTCGGAGCTTTATTAgctttgctgacat
cagcagcTTTGTTTGAATGGATTGAATATGTATGTGGGGTTGGAGTTATT
GTATCGTTACTGACTTTAGTAATTTTGATTAAACGGAGAAAATCATTGAG
AGCTCCCGTGATTTGTATTAAGTAAATTTT
Run BLAST on NCBI

protein sequence of TCONS_00016881-protein

>TCONS_00016881-protein ID=TCONS_00016881-protein|Name=TCONS_00016881-protein|organism=Clytia hemisphaerica|type=polypeptide|length=524bp
MEYSVTFLTLWLYIKEMINTDQPKLFYSLVASSYLIAAVILSVFIGRWVD
RTRKVRQIFLICNTLVIIGNIMYAFHFSPWFLVFGRLVSGADGPLRSVIS
GEIARCYPDSEVLSKFSSMGMAFALGFIVGPGVNFMFTTVDFNIGAWHVT
YVNIPGVYMALFFFITQICVFFMVHDLSREYDLKADAILKPILPGDIKPL
PVTTSFFYAKSNANTQSQSDRFTKSVQIPVKPKETTINFYDDTLIETSHD
NQQERRNKFKMQRLEMSGMFIRPFAFPKLASNQVVPVITEDSSLTSSSSS
NYSSTSSSSSTSSDEQSKADHILCTILTNADSLLILALTFILWYWMVAFD
MWLPIMVVDVMEMSITELNGIVFGFGCISAVILGIMSLKSFSDRMLYNLS
IICMISLAIMELIFIYMRFQHSQMYVNIVLWIIWGTLFAIVVIMDEVFLV
GVMAKMTSSKVQTFSESLRLSMSRFGALLALLTSAALFEWIEYVCGVGVI
VSLLTLVILIKRRKSLRAPVICIK
Run BLAST on NCBI

transcript from alignment at sc0000253:184239..190763-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016881 ID=TCONS_00016881|Name=TCONS_00016881|organism=Clytia hemisphaerica|type=transcript|length=6525bp|location=Sequence derived from alignment at sc0000253:184239..190763- (Clytia hemisphaerica)
ATGGAATATTCGGTGACATTTCTAACACTCTGGCTGTACATCAAAGAAAT GATCAACACAGATCAACCAAAGCTATTCTACAGTCTAGTAGCTTCCTCGT ACCTGATTGCAGCTGTTATCTTATCAGTCTTCATTGGACGGTGGGTCGAC CGCACGCGTAAAGTACGTCAAATCTTCCTAATCTGCAACACCTTAGTTAT CATCGGTAACATAATGTATGCTTTCCATTTCTCGCCTTGGTTCTTGGTTT TCGGCCGATTGGTGTCTGGTGCTGATGGGCCACTCAGGTCGGTGATTTCT GGAGAAATTGCAAGATGTTATCCAGATTCAGAAGTCCTCAGTAAATTCTC TTCGATGGGAATGGCATTTGCACTTGGTTTCATTGTTGGACCTGGAGTTA ATTTCATGTTTACGACGGTCGATTTCAACATTGGTGCTTGGCACGTGACT TATGTGAACATTCCTGGTGTTTATATGGCACTGTTTTTCTTTATCACTCA GGTAATTGTCATATTATAAAAAAGAATTCATCTACCTTACCAATACCTTG GTATTGCAAATCTTTCTATCAACTATAAAAAAGCGAAAAATGAAGAAATA ACCATTTTTTCCCAAAAATACTTTGTTCGAAATTGGACTCGTATTAGGAT TTTAGTCTTAAAGTCTACTTTAATGTACTATAGATCCTGAATTAAAGTAG TTTTTATTTAATGATCACTGACTGTCTTTTTACAGATATGTGTTTTCTTC ATGGTTCATGATCTCTCACGTGAGTACGACCTCAAAGCTGACGCCATCCT TAAACCAATTTTACCAGGAGATATCAAACCACTACCAGTTACAACAAGCT TTTTTTATGCTAAATCCAACGCTAATACCCAATCACAATCAGATCGGTTC ACAAAATCAGTTCAGATTCCAGTCAAACCAAAAGAAACAACCATCAACTT TTACGATGACACTTTGATTGAAACATCACATGACAATCAACAAGAACGAC GTAACAAATTCAAAATGCAACGACTCGAAATGTCTGGTATGTTTATAAGA CCCTTTGCATTCCCAAAGTTAGCATCCAATCAAGTTGTTCCAGTAATCAC TGAAGATTCATCCCTAACATCCAGCTCCTCATCAAACTACAGCTCTACCT CCTCCTCATCATCGACATCCAGTGCTGAACAATCCAAAGCTGACCATATC CTCTGTACCATCCTAACCAATGCAGATTCCCTCTTAATCCTCGCGCTCAC CTTCATTCTCTGGTACTGGATGGTTGCATTTGATATGTGGTTGCCAATTA TGGTGGTCGATGTTATGGAGATGAGCATTACAGAACTCAATGGCATTGTC TTCGGTTTCGGTTGCATCTCAGCTGTTATTCTTGGTATAATGTCTTTAAA ATCATTCTCTGATCGAATGTTGTACAATCTCTCAATCATATGTATGATCT CTTTAGCTATAATGGAGCTCATCTTCATCTACATGCGATTCCAACATTCC CAAATGTATGTCAATATTGTCTTATGGATCATTTGGGGCACCTTATTTGC CATTGTGGTTATTATGGATGAAGTATTCCTGGTTGGTGTTATGGCAAAGA TGACCAGCTCTAAAGTACAAACATTCTCTGAGAGCCTTCGACTCTCAATG TCACGCTTCGGAGCTTTATTAGCTTTGCTGACATCAGCAGCTTTGTTTGA ATGGATTGAATATGTATGTGGGGTTGGAGTTATTGTATCGTTACTGACTT TAGTAATTTTGATTAAACGGAGAAAATCATTGAGAGCTCCCGTGATTTGT ATTAAGTAAATTTTATAATAGTTATAACTTTTTTGCACTATTTTAATTGT ATAAATTGTATATAGATCAAGATAGCATATCTGCAATGTACATTTTTTTC TAGATAATAATATTTTTTATAAGAAACTCATTGAAAATGATACTCCTTAG TGGAATAGAAAAAAGTGGCAATAACAAATGGCACAATATAGAAAAATTAT AACATGTGAAATTTTATAATTATAAGCAAATGCCTAGAAAAAGAAAAAAA TCAAATGAAACCTATAGCTTCTGTCATTTGAATGTCCATTGATTGGTCAG GCACCTTCTTTTGAGCTCTGCAAAGCACATATATTTTCAAAAAAATTAAA GTAAATTTGTATCATTTTAAAGTATCTACTGTAATTATTTTCCACAAAAG ATAATCATTGAAAAAATAAGTTTTTTAAATAACATATAGAACAAGGCTGT CATGATTTAAGATTTTCATCAATAATTATTTGACATTGAGTTTCAAGCCG AAAGCTAGAGGAGAATCTTCAACCTATCAAACAAGAAAATATGAAGCCTT TAAAATTTGTGCTTCATTGAACCTGGCACTTTTTTGTTTTGGCGTTTTAA ATTTTTTATATTTTCTGGTGGTAAATGTTGCTGTGTTTGTATGAAAACCA CGCGGGCCACGCAACCTATGTAAGAAGTAAGTGAGCGTCGAATCCTTGAT AGGGAGATTTGACTCTAGCATTTGGATTCACTTTATTTACATGATTTACA TTACATGATTTGATTGCTATTATATGGATCCAAGAAGAATAAAACGAAGA CTTTTGCAAAGAGGAGAATCTAAACTTTGGGGACCTTATTTTCGGCAGAG AAAAAACATTTTGAAAATACTTTTGCGTCAGAAGGTGTATATTCAACCAA ACTAAAAATAGATTTTCGGAAAATTTTTGTAAAAGCTTCTTTGTCTCAAA ATCTTCAAAATACCGGCTTTCGACCAATTTTCTATGCCATTTTTTTTCGA AGAAAAGCATTTAATTTTCGAAGAAAAGCATTTAAATAATTTTTGATACA CCAATTCAGAAGATTTTTCCGAAAAATTTCAAATAGATCAATTCTTCGCA GACAGTTTAAAAAATTATCGAAAGAAAAAGGTTAATTACGCATTGAAATT CAGCACTTTTTGTAAAAGAGGGTAATATATAAGATTTTATTAACGTCTTT TTAAAGTTCATTATGTAATTTGTGTAATTAAATTCTTAATTACTTTTGAC ACAATAAATCACCAAACAATTTGTAAAGACAGTTTTTTGTTATAGGTGTC AAGGAAAACAAAAAAAAAGTTTTATCAACATATCCATTAACGAATTTTTT TGACTATGGTCAGAGCCCTTAAGTCTGGTGTTGAAGTAATTTCCGAGCAG ATTCTGATACCGATAAATATTTTCAAAGTAAAAGTCATGGCACAGTAAGA GAATCTGCCCAGGTTGACACACAGCATTGATTTTTCTCATCTTAATTTGA AATGAAAATTAAATGAGCTTTTAAGCGTGGTGATTGGCTAAAGCCCCAAC ATCAAAAGCCTATCACAAATATAAACATTAGAAACCAGTCGCTTTCATTT TCTTCTTCAAACAAAAATAAGCAAAGTGGTTTTTATTGTTTGTGTGGTAA TTTTTTGACACGCGTGAAAACTAAGAAGGAAAAGCTAAATGGTCAGGCCC TAATTTTTCCTAAAGTTCGACCAGGTAGCTTTCGCATGATCTATATATGA ATATATAGAAAGGCCAAGACACAAGAAACTGACAAGATTGATCTCTATTT TGAGATACAAAATTAAGTATATTTTAGTATAGAGTAAATGGTTTTAGAAA ATCACAAATTTAACCAAATACTGATAACTGATGAACTGATGTCCATTTCC CAACAATCATTAATAAGTTTTTTTGTGAAAAACCTCTACATGTTATTTAA ATGATAATCCAACACCATATAAAAAGTTCAGAATATTCCAACAAAGATAC TTTCGACGTTAACTAAATCTTCTCCAAAGACGGTAAAAACAAGGATGTTA AACTCGTGCTTCTCGGCGACTCTTGGTGTTTGTTGTTTTCGTATGTGTCT CCTTCTCTTCTCTTCTCTTTTCCTCTCTAGGTCATATTTTTGGGTGATTT TATACCATTTGTCGGATAGGCAATTTCGTAAGTTATGGTCGTTAGGACCA GGACGGAAATCATTTTGTGTGTTATGTTATGTCGTTCTGGGGCCTAGCGG AAGTGTCGTTAGCCCCAAATGGACCTCCTACGTTTAGCAGTTAATGTTAA TTAATTGAAATTAATTGAAATTAATTGAAATTAATAAAATGAAAACGCTG AATCACATATTTCTTAACAATAAAAGTCCGTTGATCTTAGTCAAACCAGT TTGACAAGTCTGTCTGCCGTACCTCCGGATATCCTTATAAGGTGTTAAGA ACGTGTGTAGACACCTATAAAAAGTGCAAGGTCTGTTCGTTAGATTCAAT ATCAATCTTTCATGTGCTTTCATTTGAAACATTTATGACATGAAAACTCA TATATAGCTGGAAATTCTCCATTTAAAATTTGAAAATCGATACTGGATAC TGAATACTAGATACGTAGCTTTAATCTTACCAACAAAATGTACAAAAACC TAGATAAAGAAGCAGGGAGTGACGAGCCTGTAGACATCAAGCAATGGGAA CGCAAACGTTATTGGACAACCAAAGCTTTCACATTGGAGTGTATCATGCT AGGTATGTTTTGAATCATAAAATACTGATTCGAATCCAGTTACTTTGTTT TTCCTTACTCTGATAGCAATCCTTTTCAATGACGTTCATCAGTCAATATT AACCATCCCGAACAGTTTTTGAACAAATCAATTCTTCTTTTTTGTAGGTA TGGAATATTCGGTGACATTTCTCACACTCTGGCTGTACATCAAGGAAATG ATCAACACAGATCAGCCAAAGCTATTCTACAGCTTAGTAGCTTCCTCGTA CCTGATTGCAGCTGTTATCTTATCAGTCTTCATCGGACGGTGGGTCGACC GCACGCGTAAAGTACGTCAAATCTTCCTGATCTGCAACACCTTAGTTATC ATCGGTAACATAATGTATGCTTTCCATTTCTCGCCTTGGTTCTTGGTTTT CGGCCGATTGGTGTCTGGCGCTGATGGGCCACTCAGGTCGGTGATTTCTG GAGAGATTGCAAGATGTTATCCAGATTCAGAAGTCCTCAGTAGATTTTCT TCCATGGGAATGGCATTTGCACTTGGTTTCATTGTTGGACCTGGAGTTAA TTTCATGTTTACGACGGTCGATTTCAACATTGGTGCTTGGCACGTAACTT ATGTGAACATTCCTGGTGTTTATATGGCTTTGTTTTTCTTTATCACTCAG GTAATTGTCACATTATATAAAAGAATTCATCCACCTTACCATTACCTCGC TATTCCAATATTTTTATTCGATTATAATAAAGCAAAAAATGAAGTAGGGC TATAACCATTTTTTCCCAAAAATACTTTGTTAGAAAATGGACTCATATTG GGATTTTAGACTTTTAAGTCTGCTTTAATGTACTATAGATCTTAAATTAA AGTAGTTGTTATTTAATGATCGCTGAATTTCTTTTTACAGATATGCGTCT TCTTCATGGTTCATGATCTCTCACGTGAGTACGACCTCAAAGCTGACGCC ATCCTTAAACCAATTTTACCAGGAGATATCAAACCACTACCAGTTACAAC AAGCTTTTTTTATGCTCCATCCAACGCTAATACCCAATCACAATCAGATC GGTTCACAAAATCAGTTCAAATTCCAGTCAAACCAAAAGAAACAACCATC AACTTTTACGATGACACTTTGATTGAAACAGCACTTCGTACTCAACAAGA ACAAGAACGACGTAACAAATTCAAAATGCAGCGACTCGAAATGTCTGGTA TGTTTATAAGACCCTTTGCATTCCCAAAATTAGCATCCAATCAAGTTGTT CCAGTAATCACTGAAGATTCATCCCTAACATCCAGCTCCTCGTCAAACTA CAGCTCTATCTCCTCCTCATCATCAACATCCAGTGATGAACAATCCAAAG CTGACCATATCCTCTGTACCATCCTAACCAATGCAGATTCTCTCCTGATC CTCGCGCTCACCTTCATTCTCTGGTACTGGATGGTTGCATTTGATATGTG GTTGCCAATTATGGTGGTCGATGTTATGGAGATGAGCATTACAGAACTCA ATGGCATTGTCTTCGGTTTCGGTTGCATCTCAGCTGTTATTCTTGGTATA ATGTCTTTAAAATCATTCTCTGATCGAATGTTGTACAATCTCTCAATCAT ATGTATGATCTCTTTAGCTATAATGGAGCTCATCTTCATCTACATGCGAT TCCAACATTCCCAAATGTATGTCAATATTGTCTTATGGATCATTTGGGGC ACCTTATTTGCCATTGTGGTTATTATGGATGAAGTATTCCTGGTTGGTGT TATGGCAAAGATGACCAGCTCTAAAGTACAAACATTCTCTGAGAGCCTTC GACTCTCAATGTCACGCTTCGGAGCTTTATTAGCTTTGCTGACATCAGCA GCTTTGTTTGAATGGATTGAATATGTATGTGGGGTTGGAGTTATTGTATC GTTACTGACTTTAGTAATTTTGATTAAACGGAGAAAATCATTGAGAGCTC CCGTGATTTGTATTAAGTAAATTTT

Coding sequence (CDS) from alignment at sc0000253:184239..190763-

>TCONS_00016881 ID=TCONS_00016881|Name=TCONS_00016881|organism=Clytia hemisphaerica|type=CDS|length=4725bp|location=Sequence derived from alignment at sc0000253:184239..190763- (Clytia hemisphaerica)
ATCCAGTGATGAACAATCCAAAGCTGACCATATCCTCTGTACCATCCTAA
CCAATGCAGATTCTCTCCTGATCCTCGCGCTCACCTTCATTCTCTGGTAC
TGGATGGTTGCATTTGATATGTGGTTGCCAATTATGGTGGTCGATGTTAT
GGAGATGAGCATTACAGAACTCAATGGCATTGTCTTCGGTTTCGGTTGCA
TCTCAGCTGTTATTCTTGGTATAATGTCTTTAAAATCATTCTCTGATCGA
ATGTTGTACAATCTCTCAATCATATGTATGATCTCTTTAGCTATAATGGA
GCTCATCTTCATCTACATGCGATTCCAACATTCCCAAATGTATGTCAATA
TTGTCTTATGGATCATTTGGGGCACCTTATTTGCCATTGTGGTTATTATG
GATGAAGTATTCCTGGTTGGTGTTATGGCAAAGATGACCAGCTCTAAAGT
ACAAACATTCTCTGAGAGCCTTCGACTCTCAATGTCACGCTTCGGAGCTT
TATTAGCTTTGCTGACATCAGCAGCTTTGTTTGAATGGATTGAATATGTA
TGTGGGGTTGGAGTTATTGTATCGTTACTGACTTTAGTAATTTTGATTAA
ACGGAGAAAATCATTGAGAGCTCCCGTGATTTGTATTAAGTAAATATGTG
TTTTCTTCATGGTTCATGATCTCTCACGTGAGTACGACCTCAAAGCTGAC
GCCATCCTTAAACCAATTTTACCAGGAGATATCAAACCACTACCAGTTAC
AACAAGCTTTTTTTATGCTAAATCCAACGCTAATACCCAATCACAATCAG
ATCGGTTCACAAAATCAGTTCAGATTCCAGTCAAACCAAAAGAAACAACC
ATCAACTTTTACGATGACACTTTGATTGAAACATCACATGACAATCAACA
AGAACGACGTAACAAATTCAAAATGCAACGACTCGAAATGTCTGGTATGT
TTATAAGACCCTTTGCATTCCCAAAGTTAGCATCCAATCAAGTTGTTCCA
GTAATCACTGAAGATTCATCCCTAACATCCAGCTCCTCATCAAACTACAG
CTCTACCTCCTCCTCATCATCGACATGGAATATTCGGTGACATTTCTAAC
ACTCTGGCTGTACATCAAAGAAATGATCAACACAGATCAACCAAAGCTAT
TCTACAGTCTAGTAGCTTCCTCGTACCTGATTGCAGCTGTTATCTTATCA
GTCTTCATTGGACGGTGGGTCGACCGCACGCGTAAAGTACGTCAAATCTT
CCTAATCTGCAACACCTTAGTTATCATCGGTAACATAATGTATGCTTTCC
ATTTCTCGCCTTGGTTCTTGGTTTTCGGCCGATTGGTGTCTGGTGCTGAT
GGGCCACTCAGGTCGGTGATTTCTGGAGAAATTGCAAGATGTTATCCAGA
TTCAGAAGTCCTCAGTAAATTCTCTTCGATGGGAATGGCATTTGCACTTG
GTTTCATTGTTGGACCTGGAGTTAATTTCATGTTTACGACGGTCGATTTC
AACATTGGTGCTTGGCACGTGACTTATGTGAACATTCCTGGTGTTTATAT
GGCACTGTTTTTCTTTATCACTCAGATCCAGTGATGAACAATCCAAAGCT
GACCATATCCTCTGTACCATCCTAACCAATGCAGATTCTCTCCTGATCCT
CGCGCTCACCTTCATTCTCTGGTACTGGATGGTTGCATTTGATATGTGGT
TGCCAATTATGGTGGTCGATGTTATGGAGATGAGCATTACAGAACTCAAT
GGCATTGTCTTCGGTTTCGGTTGCATCTCAGCTGTTATTCTTGGTATAAT
GTCTTTAAAATCATTCTCTGATCGAATGTTGTACAATCTCTCAATCATAT
GTATGATCTCTTTAGCTATAATGGAGCTCATCTTCATCTACATGCGATTC
CAACATTCCCAAATGTATGTCAATATTGTCTTATGGATCATTTGGGGCAC
CTTATTTGCCATTGTGGTTATTATGGATGAAGTATTCCTGGTTGGTGTTA
TGGCAAAGATGACCAGCTCTAAAGTACAAACATTCTCTGAGAGCCTTCGA
CTCTCAATGTCACGCTTCGGAGCTTTATTAGCTTTGCTGACATCAGCAGC
TTTGTTTGAATGGATTGAATATGTATGTGGGGTTGGAGTTATTGTATCGT
TACTGACTTTAGTAATTTTGATTAAACGGAGAAAATCATTGAGAGCTCCC
GTGATTTGTATTAAGTAAATATGTGTTTTCTTCATGGTTCATGATCTCTC
ACGTGAGTACGACCTCAAAGCTGACGCCATCCTTAAACCAATTTTACCAG
GAGATATCAAACCACTACCAGTTACAACAAGCTTTTTTTATGCTAAATCC
AACGCTAATACCCAATCACAATCAGATCGGTTCACAAAATCAGTTCAGAT
TCCAGTCAAACCAAAAGAAACAACCATCAACTTTTACGATGACACTTTGA
TTGAAACATCACATGACAATCAACAAGAACGACGTAACAAATTCAAAATG
CAACGACTCGAAATGTCTGGTATGTTTATAAGACCCTTTGCATTCCCAAA
GTTAGCATCCAATCAAGTTGTTCCAGTAATCACTGAAGATTCATCCCTAA
CATCCAGCTCCTCATCAAACTACAGCTCTACCTCCTCCTCATCATCGACA
TGGAATATTCGGTGACATTTCTAACACTCTGGCTGTACATCAAAGAAATG
ATCAACACAGATCAACCAAAGCTATTCTACAGTCTAGTAGCTTCCTCGTA
CCTGATTGCAGCTGTTATCTTATCAGTCTTCATTGGACGGTGGGTCGACC
GCACGCGTAAAGTACGTCAAATCTTCCTAATCTGCAACACCTTAGTTATC
ATCGGTAACATAATGTATGCTTTCCATTTCTCGCCTTGGTTCTTGGTTTT
CGGCCGATTGGTGTCTGGTGCTGATGGGCCACTCAGGTCGGTGATTTCTG
GAGAAATTGCAAGATGTTATCCAGATTCAGAAGTCCTCAGTAAATTCTCT
TCGATGGGAATGGCATTTGCACTTGGTTTCATTGTTGGACCTGGAGTTAA
TTTCATGTTTACGACGGTCGATTTCAACATTGGTGCTTGGCACGTGACTT
ATGTGAACATTCCTGGTGTTTATATGGCACTGTTTTTCTTTATCACTCAG
ATCCAGTGATGAACAATCCAAAGCTGACCATATCCTCTGTACCATCCTAA
CCAATGCAGATTCTCTCCTGATCCTCGCGCTCACCTTCATTCTCTGGTAC
TGGATGGTTGCATTTGATATGTGGTTGCCAATTATGGTGGTCGATGTTAT
GGAGATGAGCATTACAGAACTCAATGGCATTGTCTTCGGTTTCGGTTGCA
TCTCAGCTGTTATTCTTGGTATAATGTCTTTAAAATCATTCTCTGATCGA
ATGTTGTACAATCTCTCAATCATATGTATGATCTCTTTAGCTATAATGGA
GCTCATCTTCATCTACATGCGATTCCAACATTCCCAAATGTATGTCAATA
TTGTCTTATGGATCATTTGGGGCACCTTATTTGCCATTGTGGTTATTATG
GATGAAGTATTCCTGGTTGGTGTTATGGCAAAGATGACCAGCTCTAAAGT
ACAAACATTCTCTGAGAGCCTTCGACTCTCAATGTCACGCTTCGGAGCTT
TATTAGCTTTGCTGACATCAGCAGCTTTGTTTGAATGGATTGAATATGTA
TGTGGGGTTGGAGTTATTGTATCGTTACTGACTTTAGTAATTTTGATTAA
ACGGAGAAAATCATTGAGAGCTCCCGTGATTTGTATTAAGTAAATATGTG
TTTTCTTCATGGTTCATGATCTCTCACGTGAGTACGACCTCAAAGCTGAC
GCCATCCTTAAACCAATTTTACCAGGAGATATCAAACCACTACCAGTTAC
AACAAGCTTTTTTTATGCTAAATCCAACGCTAATACCCAATCACAATCAG
ATCGGTTCACAAAATCAGTTCAGATTCCAGTCAAACCAAAAGAAACAACC
ATCAACTTTTACGATGACACTTTGATTGAAACATCACATGACAATCAACA
AGAACGACGTAACAAATTCAAAATGCAACGACTCGAAATGTCTGGTATGT
TTATAAGACCCTTTGCATTCCCAAAGTTAGCATCCAATCAAGTTGTTCCA
GTAATCACTGAAGATTCATCCCTAACATCCAGCTCCTCATCAAACTACAG
CTCTACCTCCTCCTCATCATCGACATGGAATATTCGGTGACATTTCTAAC
ACTCTGGCTGTACATCAAAGAAATGATCAACACAGATCAACCAAAGCTAT
TCTACAGTCTAGTAGCTTCCTCGTACCTGATTGCAGCTGTTATCTTATCA
GTCTTCATTGGACGGTGGGTCGACCGCACGCGTAAAGTACGTCAAATCTT
CCTAATCTGCAACACCTTAGTTATCATCGGTAACATAATGTATGCTTTCC
ATTTCTCGCCTTGGTTCTTGGTTTTCGGCCGATTGGTGTCTGGTGCTGAT
GGGCCACTCAGGTCGGTGATTTCTGGAGAAATTGCAAGATGTTATCCAGA
TTCAGAAGTCCTCAGTAAATTCTCTTCGATGGGAATGGCATTTGCACTTG
GTTTCATTGTTGGACCTGGAGTTAATTTCATGTTTACGACGGTCGATTTC
AACATTGGTGCTTGGCACGTGACTTATGTGAACATTCCTGGTGTTTATAT
GGCACTGTTTTTCTTTATCACTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009448XLOC_009448Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016881-proteinTCONS_00016881-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016881-exon-sc0000253-1575043694:190263..190763TCONS_00016881-exon-sc0000253-1575043694:190263..190763Clytia hemisphaericaexon
TCONS_00016881-exon-sc0000253-1575043694:189598..190028TCONS_00016881-exon-sc0000253-1575043694:189598..190028Clytia hemisphaericaexon
TCONS_00016881-exon-sc0000253-1575043694:184239..184886TCONS_00016881-exon-sc0000253-1575043694:184239..184886Clytia hemisphaericaexon
TCONS_00016881-exon-sc0000253-1510915933:190263..190763TCONS_00016881-exon-sc0000253-1510915933:190263..190763Clytia hemisphaericaexon
TCONS_00016881-exon-sc0000253-1510915933:189598..190028TCONS_00016881-exon-sc0000253-1510915933:189598..190028Clytia hemisphaericaexon
TCONS_00016881-exon-sc0000253-1510915933:184239..184886TCONS_00016881-exon-sc0000253-1510915933:184239..184886Clytia hemisphaericaexon
TCONS_00016881-exon-sc0000253-1491911889:190263..190763TCONS_00016881-exon-sc0000253-1491911889:190263..190763Clytia hemisphaericaexon
TCONS_00016881-exon-sc0000253-1491911889:189598..190028TCONS_00016881-exon-sc0000253-1491911889:189598..190028Clytia hemisphaericaexon
TCONS_00016881-exon-sc0000253-1491911889:184239..184886TCONS_00016881-exon-sc0000253-1491911889:184239..184886Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000253supercontigsc0000253:184239..190763 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0517545 0 0 0 0 0 0.329093 0.912258 1.7963 5.78999 1.44806 0.443043 0.418845 1.59018 0.0293879 0 0 0 0 0 0 0.0732222 0 0.0539494 0.512129 0.623846 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001958Tet-R_TetA/multi-R_MdtG
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005215 transporter activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016881 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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