TCONS_00016450-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016450-protein
Unique NameTCONS_00016450-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length426

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016450-protein ID=TCONS_00016450-protein|Name=TCONS_00016450-protein|organism=Clytia hemisphaerica|type=polypeptide|length=426bp
MAVADKNPKRSRTGLIVYLNKLFDDVERKLEQYDGNLNHIISVENLAVNK
FNKIIELSEVIAESIEDPEQLQKEIEESVKSEVKFTEKLTVLRNFIALKQ
SAVSSAVEFARATVVEPSKPKEHFKNVKLPKMVVQEFSGNPEEWISFNES
FEAVVHSNRNLSNIEKFQYLKSYLIDEAADAIKGLRLSAENYDKAREMLE
QRFGDTQVLISHHMSQLLDIPPCANVENLKELRKLHDSIEFAIRNLETLG
LDQKEYGPMLSPILLNKIPVEIKLIVSRTLEKNQKWDISKIMNTFLTELE
AREKVSTSYTEEGAYACSGASLHVSSKFENKQKREFHRKEDNQKLICIFC
RRGHRSRDCDIITKPEIRKTILQKENRCFICMKIGHRAQKCSNKMKCFNC
KGRHHVAVCTYKSDSSQSNSPNANSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009187XLOC_009187Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016450TCONS_00016450Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR005312DUF1759
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 182..202
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 396..411
e-value: 35.0
score: 1.7
coord: 377..393
e-value: 0.045
score: 19.5
coord: 346..361
e-value: 8.0
score: 5.7
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 379..413
e-value: 5.5E-6
score: 25.6
coord: 330..378
e-value: 0.0028
score: 16.9
IPR005312Protein of unknown function DUF1759PFAMPF03564DUF1759coord: 137..276
e-value: 7.1E-38
score: 129.8

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016450-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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