TCONS_00016201-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016201-protein
Unique NameTCONS_00016201-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length615

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016201-protein ID=TCONS_00016201-protein|Name=TCONS_00016201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=615bp
MNEENFKLAEKYVSTGYVNQGKEARRVLEKNLRTLLEQGKIPTEGWNDLS
IRQVLNEIALMDSNNFPNNCGVGEREARIASRLVAERHFHLGHGMGRSGD
IAEIQPKAAGSSLVAKLANSFALDVIKMAGVSSIKSCLVCPVATGMALVL
SMITLKEKRPEAKYVIWSRIDQKSCFKSILTAGLEPIIIENILNEGDYLS
TDVDSIRTTIERIGSQHIACVLTTTSCFAPRVPDRLEEIALVCKDLDVPH
VVNNAYGIQASKCMHLLQQANRVGRVDVFVQSTDKNFMVPVGGSIIAGFD
KQLIQDIGKMYPGRASASPIIDFFITMLSLGANGYKKLLQERKELYQYLH
DGMKRIAKQFNETVIPAKENTISIALSLRSLDERCDGQKKSITEFGSHLF
KRSVSGTRVVTPNDEKTIGRYQFIGWGAHYSNYPCSYLTAAAAIGATRQD
IDLFLKRLEKNFKDFLKEPSKKVSSSKKETDKSATVKLNGVSPTTTTTTS
TNGGLIETSFSSSLPRTRTEVPRALAKNPLRVINSCGVEGDTSKTWPKQS
KEYAMDDSAIQKKRNQWFNNVDGKRKSQSTTSVDERAQAVREERTQQVIT
KKDLSPDKMSFLIDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009055XLOC_009055Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016201TCONS_00016201Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019872Sec-tRNA_Se_transferase
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR008829SepSecS/SepCysS
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Biological Process
TermDefinition
GO:0097056selenocysteinyl-tRNA(Sec) biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016785transferase activity, transferring selenium-containing groups
GO:0003824catalytic activity
GO:0016740transferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0097056 selenocysteinyl-tRNA(Sec) biosynthetic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0016785 transferase activity, transferring selenium-containing groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..513
IPR019872O-phosphoseryl-tRNA(Sec) selenium transferaseTIGRFAMTIGR03531TIGR03531coord: 13..462
e-value: 7.8E-191
score: 632.4
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 93..330
e-value: 9.4E-39
score: 132.5
IPR008829SepSecS/SepCysS familyPFAMPF05889SepSecScoord: 61..461
e-value: 1.2E-147
score: 491.6
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 26..467

Blast
[Close]
BLAST of TCONS_00016201-protein vs. Swiss-Prot (Human)
Match: SPCS (O-phosphoseryl-tRNA(Sec) selenium transferase OS=Homo sapiens GN=SEPSECS PE=1 SV=2)

HSP 1 Score: 596.66 bits (1537), Expect = 0.000e+0
Identity = 272/481 (56.55%), Postives = 365/481 (75.88%), Query Frame = 0 
Query:    1 MNEENFKLAEKYVSTGYVNQGKEARRVLEKNLRTLLEQGKIPTEGWNDLSIRQVLNEIALMDSNNFPNNCGVGEREARIASRLVAERHFHLGHGMGRSGDIAEIQPKAAGSSLVAKLANSFALDVIKMAGVSSIKSCLVCPVATGMALVLSMITLKEKRPEAKYVIWSRIDQKSCFKSILTAGLEPIIIENILNEGDYLSTDVDSIRTTIERIGSQHIACVLTTTSCFAPRVPDRLEEIALVCKDLDVPHVVNNAYGIQASKCMHLLQQANRVGRVDVFVQSTDKNFMVPVGGSIIAGFDKQLIQDIGKMYPGRASASPIIDFFITMLSLGANGYKKLLQERKELYQYLHDGMKRIAKQFNETVIPAKENTISIALSLRSLDERCDGQKKSITEFGSHLFKRSVSGTRVVTPNDEKTIGRYQFIGWGAHYSNYPCSYLTAAAAIGATRQDIDLFLKRLEKNFKDFLKEPSKKVSSSKKETD 481
            MN E+F   E+ VS  YV QG EARR  E  +R LLE+GK P  GW++ ++   L+E+A+MDSNNF  NCGVGERE R+AS LVA RH+   HG+GRSGDI+ +QPKAAGSSL+ K+ NS  LD+IK+AGV ++ +C V P+ATGM+L L  +TL+ KRP+AKY+IW RIDQKSCFKS++TAG EP++IEN+L EGD L TD+ ++   ++ +G   I C+ +TTSCFAPRVPDRLEE+A++C + D+PH+VNNAYG+Q+SKCMHL+QQ  RVGR+D FVQS DKNFMVPVGG+IIAGF+   IQ+I KMYPGRASASP +D  IT+LSLG+NGYKKLL+ERKE++ YL + +K++++ +NE ++    N IS+A++L++LDE  D   K++T+ GS LF R VSG RVV     +T+  Y F G+ +H +NYPC+YL AA+AIG   QD+DLF+KRL++  K   KE SK+   +  +T+
Sbjct:    1 MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAIMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVL-EGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRD---KAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERSKESDDNYDKTE 477
The following BLAST results are available for this feature:
BLAST of TCONS_00016201-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPCS0.000e+056.55O-phosphoseryl-tRNA(Sec) selenium transferase OS=H... [more]
back to top