TCONS_00015990-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015990-protein
Unique NameTCONS_00015990-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length193

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015990-protein ID=TCONS_00015990-protein|Name=TCONS_00015990-protein|organism=Clytia hemisphaerica|type=polypeptide|length=193bp
SGTAYYRLFKFDKAELCHHQHLQLAKPSASALALASKRPPNKKEEMIALT
NLGCVYQAKREFELALQTFKKAYDIAEELDENASQARILNNMSNIYEANF
DFESAVECLKSRMEFMHEVGDINGSIKTSAALGSLFILLGDIRESIMHFE
NAVIGLRMKIVKAQQDEFEANAQPPEGGEDMIDNDAYYDKGVA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008931XLOC_008931Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015990TCONS_00015990Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 46..79
e-value: 0.016
score: 24.4
coord: 86..119
e-value: 34.0
score: 10.3
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 86..119
score: 5.163
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 46..79
score: 9.411
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 84..154
e-value: 7.7E-7
score: 28.7
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 34..83
e-value: 1.9E-12
score: 47.2
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 11..152
NoneNo IPR availablePFAMPF13424TPR_12coord: 46..112
e-value: 6.5E-11
score: 42.3
NoneNo IPR availableGENE3D3.30.70.100coord: 1..33
e-value: 0.1
score: 12.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..193
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 46..119
score: 10.204

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015990-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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