TCONS_00015451-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015451-protein
Unique Name	TCONS_00015451-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	291

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015451-protein ID=TCONS_00015451-protein|Name=TCONS_00015451-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp
MGCEWSAANHTYFQIANLFLAFTYFVPNTLSGLLLLRFFLGTAGFFFILW
AGIILCSPDTLAWNLVFLAFNYGHAAWMLYKRRKIHFVEEHEVLYGAMFE
QLGVPRWQYKCVADSSEVMELERDHVYAHEDETDGEHITILTNGSLRVMK
AGNIMHRLKPYEFLDSPEWIASTTGNMAAPVTFQVTLISDGCTVITWKRR
DLLRALRSEPHLKNIFDSLIGQDVAKKLFKSQTNPSTGFNSSNQSLNATS
PKGYGSTKNSTNQFDVYAYNSETESLIAKDEKSSLLEIKTK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008626	XLOC_008626	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015451	TCONS_00015451	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006916	Popeye_prot
IPR014710	RmlC-like_jellyroll
IPR018490	cNMP-bd-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006916	Popeye protein	PFAM	PF04831	Popeye	coord: 9..230 e-value: 1.9E-37 score: 128.4
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 81..235 e-value: 5.4E-7 score: 28.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..261
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 104..217

Blast

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BLAST of TCONS_00015451-protein vs. Swiss-Prot (Human)
Match: POPD1 (Blood vessel epicardial substance OS=Homo sapiens GN=BVES PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.294e-38
Identity = 81/239 (33.89%), Postives = 127/239 (53.14%), Query Frame = 0

Query:    3 CE-WSAANHTYFQIANLFLAFTYFVPNTLS-GLLLLRFFLGTAGFFFILWAGIILCSPDTLAWNLVFLAFNYGHAAWMLYKRRKIHFVEEHEVLYGAMFEQLGVPRWQYKCVADS-SEVMELERDHVYAHEDETD-GEHITILTNGSLRVMKAGNIMHRLKPYEFLDSPEWIASTTGNMAAPVTFQVTLIS-DGCTVITWKRRDLLRALRSEPHLKNIFDSLIGQDVAKKLFKSQTNPS 236
            CE W   +H  F +AN+  A    +P TL   ++ LR  L      +I+WA +  C+ D + WN VFL  N  H +++LYK+R +   +E   +Y  +FE L VP   ++ +      +  L++   YA ED+T   + ++IL  G ++V   G+ +H + P  F+DSPE+ ++    M     FQVT+I+ D C  + W R  L   L SEP L  IF  LIG+D+  KL+ S  +P+
Sbjct:   34 CENWREIHHLVFHVANICFAVGLVIPTTLHLHMIFLRGMLTLGCTLYIVWATLYRCALDIMIWNSVFLGVNILHLSYLLYKKRPVKIEKELSGMYRRLFEPLRVPPDLFRRLTGQFCMIQTLKKGQTYAAEDKTSVDDRLSILLKGKMKVSYRGHFLHNIYPCAFIDSPEFRST---QMHKGEKFQVTIIADDNCRFLCWSRERLTYFLESEPFLYEIFRYLIGKDITNKLY-SLNDPT 268

The following BLAST results are available for this feature:

BLAST of TCONS_00015451-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015451-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
POPD1	8.294e-38	33.89	Blood vessel epicardial substance OS=Homo sapiens ...	[more]

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TCONS_00015451-protein (polypeptide) - C. hemisphaerica