TCONS_00015351-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015351-protein
Unique Name	TCONS_00015351-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	475

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015351-protein ID=TCONS_00015351-protein|Name=TCONS_00015351-protein|organism=Clytia hemisphaerica|type=polypeptide|length=475bp
MTSSTIMATKKKLSKKKSSSIEGKRGTNGRDNTRRRKSKMKEKEDTLTVV
VRIRPISVNEVDNGYSEIITAVEDNMVCLLDPTENDDMNVLRVNRSREKM
YVFDNAFGPFSTQTEVYNQTTRTLVESVLEGYNATIFAYGPTGAGKTFTM
LGTDSEPGIMALTLNDLYRQMENSKGNELYTVSMSYLEIYNEMIRDLLNP
SSDFLDLREDYRGVQVAGLTSYEARDTSHVMEMLSRGNKERMCEPTAVNK
TSSRSHAVLQVTVEQKSSIRDVSEEIKTAKLFMIDLAGSERAAQTQNTGK
RFIEGAHINRSLLALGNCINALAEKGSKYINYRDSKLTRLLKDSLGGNCK
TVMIAHVSPASGSFEESRNTLMYADRAKNIKLKAKRNQHSVNYHVSQYQG
IISELREEVIKLKAQLVEAETIETRPTAMSADRQTIEKLKDNLKKKFQEQ
LELRKELIDLEDSSLQFAVEYQRYL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008581	XLOC_008581	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015351	TCONS_00015351	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR019821	Kinesin_motor_CS
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003777	microtubule motor activity
GO:0008017	microtubule binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 436..460
None	No IPR available	COILS	Coil	Coil	coord: 395..422
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
IPR001752	Kinesin motor domain	PRINTS	PR00380	KINESINHEAVY	coord: 330..351 score: 66.4 coord: 246..263 score: 50.88 coord: 131..152 score: 69.92 coord: 280..298 score: 49.21
IPR001752	Kinesin motor domain	SMART	SM00129	kinesin_4	coord: 44..388 e-value: 4.3E-151 score: 517.9
IPR001752	Kinesin motor domain	GENE3D	3.40.850.10		coord: 38..394 e-value: 3.2E-126 score: 420.2
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 52..380 e-value: 1.6E-109 score: 365.8
IPR001752	Kinesin motor domain	PROSITE	PS50067	KINESIN_MOTOR_2	coord: 46..380 score: 117.884
IPR019821	Kinesin motor domain, conserved site	PROSITE	PS00411	KINESIN_MOTOR_1	coord: 279..290
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 47..419

Blast

[Close]

BLAST of TCONS_00015351-protein vs. Swiss-Prot (Human)
Match: KIF19 (Kinesin-like protein KIF19 OS=Homo sapiens GN=KIF19 PE=2 SV=2)

HSP 1 Score: 502.286 bits (1292), Expect = 3.304e-169
Identity = 247/452 (54.65%), Postives = 333/452 (73.67%), Query Frame = 0

Query:   43 KEDTLTVVVRIRPISVNEVDNGYSEIITAVEDNMVCLLDPTENDDMNVLRVNRSREKMYVFDNAFGPFSTQTEVYNQTTRTLVESVLEGYNATIFAYGPTGAGKTFTMLGTDSEPGIMALTLNDLYRQMENSKGNELYTVSMSYLEIYNEMIRDLLNPSSDFLDLREDYRGV-QVAGLTSYEARDTSHVMEMLSRGNKERMCEPTAVNKTSSRSHAVLQVTVEQKSSIRDVSEEIKTAKLFMIDLAGSERAAQTQNTGKRFIEGAHINRSLLALGNCINALAEKGS-KYINYRDSKLTRLLKDSLGGNCKTVMIAHVSPASGSFEESRNTLMYADRAKNIKLKAKRNQHSVNYHVSQYQGIISELREEVIKLKAQLVEAE-----------------TIETRPTAMSADRQTIEKLKDNLKKKFQEQLELRKELIDLEDSSLQFAVEYQRYL 475
            K+  L V +R+RPISV E++ G + I   V++ MV L+DP E+ D ++LR +RSREK Y+FD AF   +TQ  VY  TT++L+E V+ GYNAT+FAYGPTG GKT+TMLGTD EPGI   TLNDL+R +E +  +  Y VSMSYLEIYNEMIRDLLNPS  +L+LRED +GV QVAG+T     +   +M++L +GN++R  EPTA N+TSSRSHAVLQVTV Q+S ++++ +E++  +LFMIDLAGSERA+QTQN G+R  EGAHINRSLLALGNCINAL++KGS KYINYRDSKLTRLLKDSLGGN +TVMIAH+SPAS +FEESRNTL YA RAKNIK + K+N  +V+YH++QY  II++LR E+ +LK ++ E                     E +  +   ++  + +L++ L   FQEQ+++R+ L++LE+ +++  ++  R+L
Sbjct:    8 KDQQLMVALRVRPISVAELEEGATLIAHKVDEQMVVLMDPMEDPD-DILRAHRSREKSYLFDVAFDFTATQEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGTDQEPGIYVQTLNDLFRAIEETSNDMEYEVSMSYLEIYNEMIRDLLNPSLGYLELREDSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVLQVTVRQRSRVKNILQEVRQGRLFMIDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALSDKGSNKYINYRDSKLTRLLKDSLGGNSRTVMIAHISPASSAFEESRNTLTYAGRAKNIKTRVKQNLLNVSYHIAQYTSIIADLRGEIQRLKRKIDEQTGRGQARGRQDRGDIRHIQAEVQLHSGQGEKAGMGQLREQLASAFQEQMDVRRRLLELENRAMEVQIDTSRHL 458

The following BLAST results are available for this feature:

BLAST of TCONS_00015351-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015351-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KIF19	3.304e-169	54.65	Kinesin-like protein KIF19 OS=Homo sapiens GN=KIF1...	[more]

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TCONS_00015351-protein (polypeptide) - C. hemisphaerica