TCONS_00014988-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014988-protein
Unique NameTCONS_00014988-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length348

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014988-protein ID=TCONS_00014988-protein|Name=TCONS_00014988-protein|organism=Clytia hemisphaerica|type=polypeptide|length=348bp
KDDDGISDSDYDSSWESDDDDTESKKKRREAKRKVANKWRKKEMDCLIHH
VVKIIFDKILMEKDLLNGDVLVFLPGQGEITECVDLINKRAQEESSRTGQ
QRGRFLTTKVVCCTNIAETSLTIPGVTYVIDAGKAKKMRYDNKLRVSALK
LNDISQASAQQRTGRAGRVQPGKCYRLYSKAHHDKVMAPFDEPEMKYKAI
DELYLYAIDVSKGLEKIHLMEDACPTLDSIQYAKTRLLNLEYLEPHESQD
IEVNISTEGKFALTVMGQVSLEGAKMILASKKYGLVYESIKLAVLLQQNI
YSDKNVNVERSKYANHLGDHLTLLNLYKHFEKRVKSSETAAEIWCNEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008381XLOC_008381Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014988TCONS_00014988Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 33..170
e-value: 2.5E-7
score: 40.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 106..169
e-value: 1.3E-7
score: 31.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 43..211
score: 11.754
NoneNo IPR availableGENE3D3.40.50.300coord: 32..190
e-value: 7.9E-33
score: 112.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableCDDcd00079HELICccoord: 57..177
e-value: 1.8677E-8
score: 50.3141
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 46..211

Blast
[Close]
BLAST of TCONS_00014988-protein vs. Swiss-Prot (Human)
Match: DHX35 (Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 2.020e-32
Identity = 106/314 (33.76%), Postives = 154/314 (49.04%), Query Frame = 0 
Query:   67 NGDVLVFLPGQGEITECVDLINKRAQEESSRTGQQRG-RFLTT---------------------KVVCCTNIAETSLTIPGVTYVIDAGKAKKMRYDNKLRVSALKLNDISQASAQQRTGRAGRVQPGKCYRLYSKAHHDKVMAPFDEPEMKYKAIDE--LYLYAIDVSKGLEKIHLMEDACPTLDSIQYAKTRLLNLEYLEP--HESQDIEVNISTEGKFALTVMGQVSLEGAKMILASKKYGLVYESIKLAVLLQ-QNIY------SDKNVNVERSKYANHLGDHLTLLNLYKHFEKRVKSSETAAEIWCNE 347
            +GDVL FL GQ E+   V ++ ++A+   +RTG +R  R L                       KV+  TN+AETS+TI G+ YVID G  K   Y+ +  +  L +  +SQASA QR GR GR + GKCYRLY++   DK +     PEM+   +    L L A+ +   L + H M    P   S+  A   L  L  L+     ++ + + I+   +F L  M       AKM+L S  +G   E + +A ++Q QNI+          + V R K+A   GDHLT+LN+Y+ F K  K S+     WC E
Sbjct:  274 DGDVLAFLTGQEEVETVVSMLIEQARA-LARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVL-RFHFMSP--PPAQSMVQALELLYALGGLDKDCRLTEPLGMRIA---EFPLNPM------FAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHR-KFAVEEGDHLTMLNIYEAFIKHNKDSK-----WCQE 567
The following BLAST results are available for this feature:
BLAST of TCONS_00014988-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHX352.020e-3233.76Probable ATP-dependent RNA helicase DHX35 OS=Homo ... [more]
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